RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 ZCRB1Q8TBF4 217 aaKnown RBP30.63■■■□□ 2.49
PABPN1-206ENST00000556809 PLSCR1O15162 318 aa30.62■■■□□ 2.49
PABPN1-206ENST00000556809 EIF4A2Q14240 407 aaKnown RBP30.62■■■□□ 2.49
PABPN1-206ENST00000556809 EYA1Q99502 592 aa30.62■■■□□ 2.49
PABPN1-206ENST00000556809 NPC1L1Q9UHC9 1359 aa30.62■■■□□ 2.49
PABPN1-206ENST00000556809 KCNQ2O43526 872 aa30.61■■■□□ 2.49
PABPN1-206ENST00000556809 DDX54Q8TDD1 881 aaKnown RBP30.61■■■□□ 2.49
PABPN1-206ENST00000556809 RAPGEF4Q8WZA2 1011 aa30.61■■■□□ 2.49
PABPN1-206ENST00000556809 NUP188Q5SRE5 1749 aa30.61■■■□□ 2.49
PABPN1-206ENST00000556809 TATP17735 454 aaPredicted RBP30.59■■■□□ 2.49
PABPN1-206ENST00000556809 ZNF316A6NFI3 1004 aaPredicted RBP30.58■■■□□ 2.49
PABPN1-206ENST00000556809 CC2D1BQ5T0F9 858 aaKnown RBP30.58■■■□□ 2.49
PABPN1-206ENST00000556809 ACSBG1Q96GR2 724 aa30.58■■■□□ 2.49
PABPN1-206ENST00000556809 PKD1L3Q7Z443 1732 aa30.58■■■□□ 2.49
PABPN1-206ENST00000556809 DDX10Q13206 875 aaKnown RBP30.57■■■□□ 2.48
PABPN1-206ENST00000556809 KAT6BQ8WYB5 2073 aa30.54■■■□□ 2.48
PABPN1-206ENST00000556809 BTAF1O14981 1849 aa30.54■■■□□ 2.48
PABPN1-206ENST00000556809 IGSF1Q8N6C5 1336 aa30.53■■■□□ 2.48
PABPN1-206ENST00000556809 PROM2Q8N271 834 aa30.53■■■□□ 2.48
PABPN1-206ENST00000556809 DOT1LQ8TEK3 1739 aa30.53■■■□□ 2.48
PABPN1-206ENST00000556809 CNGB1Q14028 1251 aaPredicted RBP30.52■■■□□ 2.48
PABPN1-206ENST00000556809 PCDH11XQ9BZA7 1347 aa30.49■■■□□ 2.47
PABPN1-206ENST00000556809 PCDH11YQ9BZA8 1340 aa30.49■■■□□ 2.47
PABPN1-206ENST00000556809 CYP27B1O15528 508 aa30.49■■■□□ 2.47
PABPN1-206ENST00000556809 PSDA5PKW4 1024 aaPredicted RBP30.48■■■□□ 2.47
PABPN1-206ENST00000556809 MTHFSP49914 203 aa30.48■■■□□ 2.47
PABPN1-206ENST00000556809 PLEKHG2Q9H7P9 1386 aa30.47■■■□□ 2.47
PABPN1-206ENST00000556809 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.47■■■□□ 2.474e-16■■□□□ 12.7
PABPN1-206ENST00000556809 IL13P35225 146 aa30.46■■■□□ 2.47
PABPN1-206ENST00000556809 PRIM1P49642 420 aaKnown RBP30.45■■■□□ 2.47
PABPN1-206ENST00000556809 R3HDM1Q15032 1099 aaKnown RBP30.45■■■□□ 2.47
PABPN1-206ENST00000556809 TXNRD1Q16881 649 aa30.44■■■□□ 2.46
PABPN1-206ENST00000556809 SPG7Q9UQ90 795 aa30.43■■■□□ 2.46
PABPN1-206ENST00000556809 TOGARAM1Q9Y4F4 1720 aa30.42■■■□□ 2.46
PABPN1-206ENST00000556809 NKX1-1Q15270 411 aaPredicted RBP30.41■■■□□ 2.46
PABPN1-206ENST00000556809 NBPF14Q5TI25 921 aa30.41■■■□□ 2.46
PABPN1-206ENST00000556809 KDRP35968 1356 aa30.41■■■□□ 2.46
PABPN1-206ENST00000556809 AEBP1Q8IUX7 1158 aa30.39■■■□□ 2.46
PABPN1-206ENST00000556809 SYTL4Q96C24 671 aaPredicted RBP30.39■■■□□ 2.46
PABPN1-206ENST00000556809 ITGB4P16144 1822 aa30.38■■■□□ 2.45
PABPN1-206ENST00000556809 COL3A1P02461 1466 aaPredicted RBP30.38■■■□□ 2.45
PABPN1-206ENST00000556809 LY75O60449 1722 aa30.37■■■□□ 2.45
PABPN1-206ENST00000556809 ANO8Q9HCE9 1232 aaPredicted RBP30.37■■■□□ 2.45
PABPN1-206ENST00000556809 PHKG2P15735 406 aa30.35■■■□□ 2.45
PABPN1-206ENST00000556809 SULT6B1Q6IMI4 303 aa30.35■■■□□ 2.45
PABPN1-206ENST00000556809 PAPPAQ13219 1627 aa30.35■■■□□ 2.45
PABPN1-206ENST00000556809 IFNL2Q8IZJ0 200 aa30.34■■■□□ 2.45
PABPN1-206ENST00000556809 LRP5O75197 1615 aa30.33■■■□□ 2.45
PABPN1-206ENST00000556809 DIAPH1O60610 1272 aaKnown RBP30.33■■■□□ 2.45
PABPN1-206ENST00000556809 LRRC4BQ9NT99 713 aa30.32■■■□□ 2.44
PABPN1-206ENST00000556809 SRCAPQ6ZRS2 3230 aa30.32■■■□□ 2.44
PABPN1-206ENST00000556809 PLEKHO1Q53GL0 409 aaPredicted RBP30.31■■■□□ 2.44
PABPN1-206ENST00000556809 PPP2R1AP30153 589 aa30.3■■■□□ 2.44
PABPN1-206ENST00000556809 AMOTQ4VCS5 1084 aa30.3■■■□□ 2.44
PABPN1-206ENST00000556809 SLC27A3Q5K4L6 730 aa30.28■■■□□ 2.44
PABPN1-206ENST00000556809 MPRIPQ6WCQ1 1025 aa30.28■■■□□ 2.44
PABPN1-206ENST00000556809 RALBP1Q15311 655 aa30.27■■■□□ 2.44
PABPN1-206ENST00000556809 SLC15A2Q16348 729 aa30.27■■■□□ 2.44
PABPN1-206ENST00000556809 CASZ1Q86V15 1759 aa30.27■■■□□ 2.44
PABPN1-206ENST00000556809 PIGBQ92521 554 aa30.25■■■□□ 2.43
PABPN1-206ENST00000556809 STK32BQ9NY57 414 aa30.25■■■□□ 2.43
PABPN1-206ENST00000556809 HMOX1P09601 288 aa30.24■■■□□ 2.43
PABPN1-206ENST00000556809 ZNF530Q6P9A1 599 aaPredicted RBP30.23■■■□□ 2.43
PABPN1-206ENST00000556809 KDM6AO15550 1401 aaPredicted RBP30.22■■■□□ 2.43
PABPN1-206ENST00000556809 HSP90AB1P08238 724 aaKnown RBP30.21■■■□□ 2.43
PABPN1-206ENST00000556809 KCNQ4P56696 695 aa30.21■■■□□ 2.43
PABPN1-206ENST00000556809 DCAF5Q96JK2 942 aa30.21■■■□□ 2.43
PABPN1-206ENST00000556809 ZNF827Q17R98 1081 aa30.2■■■□□ 2.43
PABPN1-206ENST00000556809 AKT1S1Q96B36 256 aa30.2■■■□□ 2.43
PABPN1-206ENST00000556809 CFAP53Q96M91 514 aa30.2■■■□□ 2.43
PABPN1-206ENST00000556809 PDGFDQ9GZP0 370 aaPredicted RBP30.2■■■□□ 2.43
PABPN1-206ENST00000556809 PALLDQ8WX93 1383 aa30.19■■■□□ 2.42
PABPN1-206ENST00000556809 CCNL1Q9UK58 526 aaPredicted RBP30.19■■■□□ 2.42
PABPN1-206ENST00000556809 ERVV-2B6SEH9 535 aa30.18■■■□□ 2.42
PABPN1-206ENST00000556809 TMOD3Q9NYL9 352 aa30.18■■■□□ 2.42
PABPN1-206ENST00000556809 QSER1Q2KHR3 1735 aa30.18■■■□□ 2.42
PABPN1-206ENST00000556809 SMARCC1Q92922 1105 aaPredicted RBP30.17■■■□□ 2.42
PABPN1-206ENST00000556809 PRKRIP1Q9H875 184 aaPredicted RBP30.17■■■□□ 2.42
PABPN1-206ENST00000556809 TAF1LQ8IZX4 1826 aa30.17■■■□□ 2.42
PABPN1-206ENST00000556809 SCN11AQ9UI33 1791 aa30.16■■■□□ 2.42
PABPN1-206ENST00000556809 U2SURPO15042 1029 aaKnown RBP30.16■■■□□ 2.42
PABPN1-206ENST00000556809 C1orf141Q5JVX7 400 aa30.16■■■□□ 2.42
PABPN1-206ENST00000556809 MYBBP1AQ9BQG0 1328 aaKnown RBP30.16■■■□□ 2.42
PABPN1-206ENST00000556809 C5P01031 1676 aa30.15■■■□□ 2.42
PABPN1-206ENST00000556809 TUBGCP6Q96RT7 1819 aa30.15■■■□□ 2.42
PABPN1-206ENST00000556809 MTHFSDQ2M296 383 aaKnown RBP30.13■■■□□ 2.41
PABPN1-206ENST00000556809 AKAP4Q5JQC9 854 aa30.13■■■□□ 2.41
PABPN1-206ENST00000556809 ASAP1Q9ULH1 1129 aa30.13■■■□□ 2.41
PABPN1-206ENST00000556809 VIRMAQ69YN4 1812 aaKnown RBP30.12■■■□□ 2.41
PABPN1-206ENST00000556809 ATG3Q9NT62 314 aa30.11■■■□□ 2.41
PABPN1-206ENST00000556809 ADAMTS7Q9UKP4 1686 aa30.11■■■□□ 2.41
PABPN1-206ENST00000556809 SPON1Q9HCB6 807 aa30.09■■■□□ 2.41
PABPN1-206ENST00000556809 CABP4P57796 275 aa30.08■■■□□ 2.41
PABPN1-206ENST00000556809 RSPH6AQ9H0K4 717 aa30.08■■■□□ 2.41
PABPN1-206ENST00000556809 NUDCQ9Y266 331 aa30.08■■■□□ 2.41
PABPN1-206ENST00000556809 PNPLA7Q6ZV29 1317 aa30.07■■■□□ 2.4
PABPN1-206ENST00000556809 LOC102724428A0A0B4J2F2 783 aa30.06■■■□□ 2.4
PABPN1-206ENST00000556809 SIK1P57059 783 aa30.06■■■□□ 2.4
PABPN1-206ENST00000556809 LGR6Q9HBX8 967 aa30.06■■■□□ 2.4
PABPN1-206ENST00000556809 C4BP0C0L5 1744 aa30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms