RNA–Protein interactions for RNA: ENST00000556249.1

SDR39U1-217, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-217ENST00000556249 MSL1Q68DK7 614 aa22.5■■□□□ 1.19
SDR39U1-217ENST00000556249 COL23A1Q86Y22 540 aaPredicted RBP22.5■■□□□ 1.19
SDR39U1-217ENST00000556249 SLC12A5Q9H2X9 1139 aa22.5■■□□□ 1.19
SDR39U1-217ENST00000556249 GRIN3BO60391 1043 aa22.49■■□□□ 1.19
SDR39U1-217ENST00000556249 NEUROD1Q13562 356 aa22.48■■□□□ 1.19
SDR39U1-217ENST00000556249 CCNL1Q9UK58 526 aaPredicted RBP22.48■■□□□ 1.19
SDR39U1-217ENST00000556249 NSD2O96028 1365 aa22.48■■□□□ 1.19
SDR39U1-217ENST00000556249 USP54Q70EL1 1684 aa22.47■■□□□ 1.19
SDR39U1-217ENST00000556249 IP6K1Q92551 441 aa22.47■■□□□ 1.19
SDR39U1-217ENST00000556249 ANKRD36BQ8N2N9 1353 aa22.47■■□□□ 1.19
SDR39U1-217ENST00000556249 ATP10DQ9P241 1426 aa22.47■■□□□ 1.19
SDR39U1-217ENST00000556249 FBLN1P23142 703 aa22.46■■□□□ 1.19
SDR39U1-217ENST00000556249 HDGFL2Q7Z4V5 671 aaPredicted RBP22.46■■□□□ 1.19
SDR39U1-217ENST00000556249 DOT1LQ8TEK3 1739 aa22.45■■□□□ 1.19
SDR39U1-217ENST00000556249 ZNF526Q8TF50 670 aaPredicted RBP22.45■■□□□ 1.18
SDR39U1-217ENST00000556249 LY75O60449 1722 aa22.43■■□□□ 1.18
SDR39U1-217ENST00000556249 ZEB1P37275 1124 aaPredicted RBP22.43■■□□□ 1.18
SDR39U1-217ENST00000556249 ZCRB1Q8TBF4 217 aaKnown RBP22.42■■□□□ 1.18
SDR39U1-217ENST00000556249 GPBP1L1Q9HC44 474 aaPredicted RBP22.42■■□□□ 1.18
SDR39U1-217ENST00000556249 WWC3Q9ULE0 1092 aa22.42■■□□□ 1.18
SDR39U1-217ENST00000556249 A0A1W2PP64 1363 aa22.41■■□□□ 1.18
SDR39U1-217ENST00000556249 EDC4Q6P2E9 1401 aaKnown RBP22.4■■□□□ 1.18
SDR39U1-217ENST00000556249 USP47Q96K76 1375 aa22.39■■□□□ 1.18
SDR39U1-217ENST00000556249 MEGF6O75095 1541 aa22.39■■□□□ 1.17
SDR39U1-217ENST00000556249 RGPD2P0DJD1 1756 aa22.38■■□□□ 1.17
SDR39U1-217ENST00000556249 MAP3K19Q56UN5 1328 aa22.38■■□□□ 1.17
SDR39U1-217ENST00000556249 HOXC9P31274 260 aa22.38■■□□□ 1.17
SDR39U1-217ENST00000556249 TERF2IPQ9NYB0 399 aa22.38■■□□□ 1.17
SDR39U1-217ENST00000556249 AMPHP49418 695 aa22.37■■□□□ 1.17
SDR39U1-217ENST00000556249 USHBP1Q8N6Y0 703 aa22.37■■□□□ 1.17
SDR39U1-217ENST00000556249 FAM208AQ9UK61 1670 aaKnown RBP22.36■■□□□ 1.17
SDR39U1-217ENST00000556249 HSPA6P17066 643 aa22.36■■□□□ 1.17
SDR39U1-217ENST00000556249 CARD11Q9BXL7 1154 aa22.36■■□□□ 1.17
SDR39U1-217ENST00000556249 TIMELESSQ9UNS1 1208 aa22.36■■□□□ 1.17
SDR39U1-217ENST00000556249 CD2APQ9Y5K6 639 aa22.36■■□□□ 1.17
SDR39U1-217ENST00000556249 SMIM5Q71RC9 77 aa22.35■■□□□ 1.17
SDR39U1-217ENST00000556249 NBPF6Q5VWK0 638 aa22.34■■□□□ 1.17
SDR39U1-217ENST00000556249 NBPF4Q96M43 638 aa22.34■■□□□ 1.17
SDR39U1-217ENST00000556249 COG3Q96JB2 828 aa22.33■■□□□ 1.17
SDR39U1-217ENST00000556249 AMIGO3Q86WK7 504 aa22.32■■□□□ 1.16
SDR39U1-217ENST00000556249 ADCY9O60503 1353 aa22.32■■□□□ 1.16
SDR39U1-217ENST00000556249 TONSLQ96HA7 1378 aa22.31■■□□□ 1.16
SDR39U1-217ENST00000556249 RRS1Q15050 365 aaKnown RBP22.31■■□□□ 1.16
SDR39U1-217ENST00000556249 C5P01031 1676 aa22.3■■□□□ 1.16
SDR39U1-217ENST00000556249 MPRIPQ6WCQ1 1025 aa22.3■■□□□ 1.16
SDR39U1-217ENST00000556249 IGSF1Q8N6C5 1336 aa22.29■■□□□ 1.16
SDR39U1-217ENST00000556249 PALLDQ8WX93 1383 aa22.28■■□□□ 1.16
SDR39U1-217ENST00000556249 PHF14O94880 888 aa22.28■■□□□ 1.16
SDR39U1-217ENST00000556249 RAPGEF4Q8WZA2 1011 aa22.27■■□□□ 1.16
SDR39U1-217ENST00000556249 FLAD1Q8NFF5 587 aa22.26■■□□□ 1.15
SDR39U1-217ENST00000556249 AK7Q96M32 723 aa22.25■■□□□ 1.15
SDR39U1-217ENST00000556249 KIF3CO14782 793 aa22.24■■□□□ 1.15
SDR39U1-217ENST00000556249 TATP17735 454 aaPredicted RBP22.24■■□□□ 1.15
SDR39U1-217ENST00000556249 TAF1LQ8IZX4 1826 aa22.24■■□□□ 1.15
SDR39U1-217ENST00000556249 GGNBP2Q9H3C7 697 aa22.23■■□□□ 1.15
SDR39U1-217ENST00000556249 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.22■■□□□ 1.15
SDR39U1-217ENST00000556249 CGNL1Q0VF96 1302 aa22.22■■□□□ 1.15
SDR39U1-217ENST00000556249 C4BP0C0L5 1744 aa22.22■■□□□ 1.15
SDR39U1-217ENST00000556249 CYP27B1O15528 508 aa22.21■■□□□ 1.15
SDR39U1-217ENST00000556249 HSP90AB2PQ58FF8 381 aa22.21■■□□□ 1.15
SDR39U1-217ENST00000556249 PUS7Q96PZ0 661 aaKnown RBP22.21■■□□□ 1.15
SDR39U1-217ENST00000556249 PCDH11XQ9BZA7 1347 aa22.21■■□□□ 1.15
SDR39U1-217ENST00000556249 PCDH11YQ9BZA8 1340 aa22.21■■□□□ 1.15
SDR39U1-217ENST00000556249 TOGARAM1Q9Y4F4 1720 aa22.2■■□□□ 1.14
SDR39U1-217ENST00000556249 TESK2Q96S53 571 aa22.19■■□□□ 1.14
SDR39U1-217ENST00000556249 RTL1A6NKG5 1358 aa22.19■■□□□ 1.14
SDR39U1-217ENST00000556249 FYB1O15117 783 aa22.18■■□□□ 1.14
SDR39U1-217ENST00000556249 PIGBQ92521 554 aa22.18■■□□□ 1.14
SDR39U1-217ENST00000556249 SMG6Q86US8 1419 aaKnown RBP22.17■■□□□ 1.14
SDR39U1-217ENST00000556249 ST20-MTHFSA0A0A6YYL1 179 aa22.17■■□□□ 1.14
SDR39U1-217ENST00000556249 LINC00116Q8NCU8 138 aa22.17■■□□□ 1.14
SDR39U1-217ENST00000556249 UBR3Q6ZT12 1888 aa22.16■■□□□ 1.14
SDR39U1-217ENST00000556249 SMARCC1Q92922 1105 aaPredicted RBP22.16■■□□□ 1.14
SDR39U1-217ENST00000556249 ITGB4P16144 1822 aa22.15■■□□□ 1.14
SDR39U1-217ENST00000556249 LOC102724428A0A0B4J2F2 783 aa22.13■■□□□ 1.13
SDR39U1-217ENST00000556249 HMGB2P26583 209 aaKnown RBP22.13■■□□□ 1.13
SDR39U1-217ENST00000556249 SSFA2P28290 1259 aa22.13■■□□□ 1.13
SDR39U1-217ENST00000556249 SIK1P57059 783 aa22.13■■□□□ 1.13
SDR39U1-217ENST00000556249 DNAJC5GQ8N7S2 189 aa22.13■■□□□ 1.13
SDR39U1-217ENST00000556249 INSRP06213 1382 aa22.12■■□□□ 1.13
SDR39U1-217ENST00000556249 GNPATO15228 680 aa22.12■■□□□ 1.13
SDR39U1-217ENST00000556249 APLP1P51693 650 aa22.12■■□□□ 1.13
SDR39U1-217ENST00000556249 ITPK1Q13572 414 aa22.12■■□□□ 1.13
SDR39U1-217ENST00000556249 MMP10P09238 476 aa22.11■■□□□ 1.13
SDR39U1-217ENST00000556249 BCS1LQ9Y276 419 aa22.11■■□□□ 1.13
SDR39U1-217ENST00000556249 A0A0G2JLW4 131 aa22.1■■□□□ 1.13
SDR39U1-217ENST00000556249 NMRK2Q9NPI5 230 aa22.1■■□□□ 1.13
SDR39U1-217ENST00000556249 ASAP1Q9ULH1 1129 aa22.1■■□□□ 1.13
SDR39U1-217ENST00000556249 TOMM70O94826 608 aa22.09■■□□□ 1.13
SDR39U1-217ENST00000556249 FLT4P35916 1363 aa22.09■■□□□ 1.13
SDR39U1-217ENST00000556249 MAP2P11137 1827 aaKnown RBP22.08■■□□□ 1.13
SDR39U1-217ENST00000556249 NSD3Q9BZ95 1437 aa22.08■■□□□ 1.13
SDR39U1-217ENST00000556249 ATP6V1AP38606 617 aa22.08■■□□□ 1.13
SDR39U1-217ENST00000556249 HTRA3P83110 453 aa22.08■■□□□ 1.13
SDR39U1-217ENST00000556249 ARHGAP27Q6ZUM4 889 aa22.08■■□□□ 1.13
SDR39U1-217ENST00000556249 EMILIN1Q9Y6C2 1016 aa22.08■■□□□ 1.13
SDR39U1-217ENST00000556249 PXDNLA1KZ92 1463 aa22.08■■□□□ 1.12
SDR39U1-217ENST00000556249 N4BP2Q86UW6 1770 aaPredicted RBP22.07■■□□□ 1.12
SDR39U1-217ENST00000556249 CICQ96RK0 1608 aaPredicted RBP22.06■■□□□ 1.12
SDR39U1-217ENST00000556249 PPM1GO15355 546 aaPredicted RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms