RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-222ENST00000555617 CREBZFQ9NS37 354 aa17.57■□□□□ 0.4
ABCD4-222ENST00000555617 ARFGEF1Q9Y6D6 1849 aa17.56■□□□□ 0.4
ABCD4-222ENST00000555617 VEGFBP49765 207 aa17.56■□□□□ 0.4
ABCD4-222ENST00000555617 FAM50AQ14320 339 aaKnown RBP17.56■□□□□ 0.4
ABCD4-222ENST00000555617 AMIGO3Q86WK7 504 aa17.56■□□□□ 0.4
ABCD4-222ENST00000555617 C5P01031 1676 aa17.55■□□□□ 0.4
ABCD4-222ENST00000555617 PPIP5K1Q6PFW1 1433 aa17.55■□□□□ 0.4
ABCD4-222ENST00000555617 MINK1Q8N4C8 1332 aaPredicted RBP17.54■□□□□ 0.4
ABCD4-222ENST00000555617 CUL9Q8IWT3 2517 aa17.53■□□□□ 0.4
ABCD4-222ENST00000555617 ABTB2Q8N961 1025 aa17.53■□□□□ 0.4
ABCD4-222ENST00000555617 CARD10Q9BWT7 1032 aa17.53■□□□□ 0.4
ABCD4-222ENST00000555617 TAF1LQ8IZX4 1826 aa17.52■□□□□ 0.4
ABCD4-222ENST00000555617 DOT1LQ8TEK3 1739 aa17.52■□□□□ 0.39
ABCD4-222ENST00000555617 NSD2O96028 1365 aa17.52■□□□□ 0.39
ABCD4-222ENST00000555617 RNF181Q9P0P0 153 aa17.51■□□□□ 0.39
ABCD4-222ENST00000555617 SLIT3O75094 1523 aa17.51■□□□□ 0.39
ABCD4-222ENST00000555617 A0A0G2JLW4 131 aa17.5■□□□□ 0.39
ABCD4-222ENST00000555617 DLL1O00548 723 aa17.5■□□□□ 0.39
ABCD4-222ENST00000555617 POLR3AO14802 1390 aaPredicted RBP17.5■□□□□ 0.39
ABCD4-222ENST00000555617 ROCK1Q13464 1354 aa17.5■□□□□ 0.39
ABCD4-222ENST00000555617 WASLO00401 505 aaPredicted RBP17.49■□□□□ 0.39
ABCD4-222ENST00000555617 MCOLN1Q9GZU1 580 aa17.48■□□□□ 0.39
ABCD4-222ENST00000555617 POGKQ9P215 609 aa17.48■□□□□ 0.39
ABCD4-222ENST00000555617 EIF3AQ14152 1382 aaKnown RBP17.48■□□□□ 0.39
ABCD4-222ENST00000555617 UBR3Q6ZT12 1888 aa17.48■□□□□ 0.39
ABCD4-222ENST00000555617 POTECB2RU33 542 aa17.47■□□□□ 0.39
ABCD4-222ENST00000555617 CCNL1Q9UK58 526 aaPredicted RBP17.47■□□□□ 0.39
ABCD4-222ENST00000555617 CASP8AP2Q9UKL3 1982 aa17.46■□□□□ 0.39
ABCD4-222ENST00000555617 SPATA31E1Q6ZUB1 1445 aa17.46■□□□□ 0.39
ABCD4-222ENST00000555617 ACEP12821 1306 aa17.46■□□□□ 0.38
ABCD4-222ENST00000555617 CFAP70Q5T0N1 1121 aa17.45■□□□□ 0.38
ABCD4-222ENST00000555617 FCHSD2O94868 740 aa17.44■□□□□ 0.38
ABCD4-222ENST00000555617 VEGFAP15692 232 aaPredicted RBP17.44■□□□□ 0.38
ABCD4-222ENST00000555617 C14orf93Q9H972 538 aaKnown RBP17.44■□□□□ 0.38
ABCD4-222ENST00000555617 CPSF1Q10570 1443 aaKnown RBP17.44■□□□□ 0.38
ABCD4-222ENST00000555617 LTBP1Q14766 1721 aa17.44■□□□□ 0.38
ABCD4-222ENST00000555617 POTEIP0CG38 1075 aa17.43■□□□□ 0.38
ABCD4-222ENST00000555617 POTEJP0CG39 1038 aa17.43■□□□□ 0.38
ABCD4-222ENST00000555617 SOX10P56693 466 aa17.43■□□□□ 0.38
ABCD4-222ENST00000555617 RGL3Q3MIN7 710 aa17.43■□□□□ 0.38
ABCD4-222ENST00000555617 NUDT16Q96DE0 195 aaKnown RBP17.43■□□□□ 0.38
ABCD4-222ENST00000555617 TIAM2Q8IVF5 1701 aa17.43■□□□□ 0.38
ABCD4-222ENST00000555617 CCDC7Q96M83 1385 aa17.42■□□□□ 0.38
ABCD4-222ENST00000555617 DPEP1P16444 411 aa17.42■□□□□ 0.38
ABCD4-222ENST00000555617 NLRP13Q86W25 1043 aa17.42■□□□□ 0.38
ABCD4-222ENST00000555617 THSD7BQ9C0I4 1608 aa17.41■□□□□ 0.38
ABCD4-222ENST00000555617 CSB-PGBD3P0DP91 1061 aa17.41■□□□□ 0.38
ABCD4-222ENST00000555617 TSKSQ9UJT2 592 aa17.41■□□□□ 0.38
ABCD4-222ENST00000555617 HABP4Q5JVS0 413 aaKnown RBP17.4■□□□□ 0.38
ABCD4-222ENST00000555617 C4BP0C0L5 1744 aa17.4■□□□□ 0.38
ABCD4-222ENST00000555617 CCDC88AQ3V6T2 1871 aa17.39■□□□□ 0.38
ABCD4-222ENST00000555617 PRIM1P49642 420 aaKnown RBP17.39■□□□□ 0.37
ABCD4-222ENST00000555617 ADGRB1O14514 1584 aa17.39■□□□□ 0.37
ABCD4-222ENST00000555617 A0A0C4DFX4 3053 aa17.39■□□□□ 0.37
ABCD4-222ENST00000555617 KCNA3P22001 575 aa17.38■□□□□ 0.37
ABCD4-222ENST00000555617 SYTL4Q96C24 671 aaPredicted RBP17.37■□□□□ 0.37
ABCD4-222ENST00000555617 SZT2Q5T011 3432 aa17.37■□□□□ 0.37
ABCD4-222ENST00000555617 PASKQ96RG2 1323 aa17.37■□□□□ 0.37
ABCD4-222ENST00000555617 KDM6AO15550 1401 aaPredicted RBP17.37■□□□□ 0.37
ABCD4-222ENST00000555617 GLTPD2A6NH11 291 aa17.36■□□□□ 0.37
ABCD4-222ENST00000555617 DCAF5Q96JK2 942 aa17.36■□□□□ 0.37
ABCD4-222ENST00000555617 TGFB2P61812 414 aa17.35■□□□□ 0.37
ABCD4-222ENST00000555617 RASSF7Q02833 373 aa17.35■□□□□ 0.37
ABCD4-222ENST00000555617 TRAK1Q9UPV9 953 aa17.35■□□□□ 0.37
ABCD4-222ENST00000555617 ANKRD36BQ8N2N9 1353 aa17.35■□□□□ 0.37
ABCD4-222ENST00000555617 ADAMTS7Q9UKP4 1686 aa17.35■□□□□ 0.37
ABCD4-222ENST00000555617 PHF14O94880 888 aa17.34■□□□□ 0.37
ABCD4-222ENST00000555617 FXR1P51114 621 aaKnown RBP eCLIP17.33■□□□□ 0.36
ABCD4-222ENST00000555617 CHADLQ6NUI6 762 aa17.33■□□□□ 0.36
ABCD4-222ENST00000555617 ARHGEF25Q86VW2 580 aa17.33■□□□□ 0.36
ABCD4-222ENST00000555617 FLAD1Q8NFF5 587 aa17.32■□□□□ 0.36
ABCD4-222ENST00000555617 MMP10P09238 476 aa17.31■□□□□ 0.36
ABCD4-222ENST00000555617 IL2RBP14784 551 aa17.31■□□□□ 0.36
ABCD4-222ENST00000555617 MAP2K1Q02750 393 aaPredicted RBP17.3■□□□□ 0.36
ABCD4-222ENST00000555617 WDR33Q9C0J8 1336 aaKnown RBP17.29■□□□□ 0.36
ABCD4-222ENST00000555617 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.29■□□□□ 0.36
ABCD4-222ENST00000555617 PLEKHG3A1L390 1219 aa17.29■□□□□ 0.36
ABCD4-222ENST00000555617 NLRP6P59044 892 aa17.29■□□□□ 0.36
ABCD4-222ENST00000555617 DGKZQ13574 1117 aa17.29■□□□□ 0.36
ABCD4-222ENST00000555617 DDX54Q8TDD1 881 aaKnown RBP17.29■□□□□ 0.36
ABCD4-222ENST00000555617 C4AP0C0L4 1744 aa17.27■□□□□ 0.36
ABCD4-222ENST00000555617 NFAT5O94916 1531 aa17.27■□□□□ 0.36
ABCD4-222ENST00000555617 RASSF10A6NK89 507 aa17.27■□□□□ 0.36
ABCD4-222ENST00000555617 TMEM88BA6NKF7 163 aa17.27■□□□□ 0.36
ABCD4-222ENST00000555617 ZC3H4Q9UPT8 1303 aaKnown RBP17.26■□□□□ 0.35
ABCD4-222ENST00000555617 SOX12O15370 315 aa17.26■□□□□ 0.35
ABCD4-222ENST00000555617 PITPNM2Q9BZ72 1349 aa17.25■□□□□ 0.35
ABCD4-222ENST00000555617 ZNF219Q9P2Y4 722 aaPredicted RBP17.25■□□□□ 0.35
ABCD4-222ENST00000555617 USP47Q96K76 1375 aa17.25■□□□□ 0.35
ABCD4-222ENST00000555617 GCC1Q96CN9 775 aa17.24■□□□□ 0.35
ABCD4-222ENST00000555617 CDK19Q9BWU1 502 aa17.23■□□□□ 0.35
ABCD4-222ENST00000555617 NLRP2Q9NX02 1062 aa17.23■□□□□ 0.35
ABCD4-222ENST00000555617 ITGBL1O95965 494 aaPredicted RBP17.22■□□□□ 0.35
ABCD4-222ENST00000555617 DEFB115Q30KQ5 88 aa17.22■□□□□ 0.35
ABCD4-222ENST00000555617 ITGAEP38570 1179 aa17.21■□□□□ 0.35
ABCD4-222ENST00000555617 AK7Q96M32 723 aa17.21■□□□□ 0.35
ABCD4-222ENST00000555617 CCDC61Q9Y6R9 512 aa17.21■□□□□ 0.35
ABCD4-222ENST00000555617 COL6A3P12111 3177 aa17.21■□□□□ 0.35
ABCD4-222ENST00000555617 DALRD3Q5D0E6 543 aaKnown RBP17.2■□□□□ 0.34
ABCD4-222ENST00000555617 PIM2Q9P1W9 311 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms