RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 CASC1Q6TDU7 716 aa20.89■□□□□ 0.93
PPP4R3A-208ENST00000555462 VWDEQ8N2E2 1590 aa20.88■□□□□ 0.93
PPP4R3A-208ENST00000555462 DEPDC5O75140 1603 aa20.88■□□□□ 0.93
PPP4R3A-208ENST00000555462 GADD45BO75293 160 aaPredicted RBP20.88■□□□□ 0.93
PPP4R3A-208ENST00000555462 RRP9O43818 475 aaKnown RBP20.87■□□□□ 0.93
PPP4R3A-208ENST00000555462 NUCB2P80303 420 aa20.87■□□□□ 0.93
PPP4R3A-208ENST00000555462 NUDT16Q96DE0 195 aaKnown RBP20.87■□□□□ 0.93
PPP4R3A-208ENST00000555462 TMX3Q96JJ7 454 aa20.87■□□□□ 0.93
PPP4R3A-208ENST00000555462 PRDM10Q9NQV6 1147 aa20.87■□□□□ 0.93
PPP4R3A-208ENST00000555462 ZMYM3Q14202 1370 aa20.87■□□□□ 0.93
PPP4R3A-208ENST00000555462 COL3A1P02461 1466 aaPredicted RBP20.87■□□□□ 0.93
PPP4R3A-208ENST00000555462 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.87■□□□□ 0.93
PPP4R3A-208ENST00000555462 CPA1P15085 419 aa20.87■□□□□ 0.93
PPP4R3A-208ENST00000555462 NUTM1Q86Y26 1132 aa20.87■□□□□ 0.93
PPP4R3A-208ENST00000555462 UNC5CLQ8IV45 518 aa20.87■□□□□ 0.93
PPP4R3A-208ENST00000555462 INO80Q9ULG1 1556 aaPredicted RBP20.87■□□□□ 0.93
PPP4R3A-208ENST00000555462 KIDINS220Q9ULH0 1771 aa20.87■□□□□ 0.93
PPP4R3A-208ENST00000555462 KIAA1210Q9ULL0 1709 aa20.87■□□□□ 0.93
PPP4R3A-208ENST00000555462 ANKRD44Q8N8A2 993 aa20.87■□□□□ 0.93
PPP4R3A-208ENST00000555462 CD163L1Q9NR16 1453 aa20.86■□□□□ 0.93
PPP4R3A-208ENST00000555462 EIF4A2Q14240 407 aaKnown RBP20.85■□□□□ 0.93
PPP4R3A-208ENST00000555462 TSPYL4Q9UJ04 414 aa20.85■□□□□ 0.93
PPP4R3A-208ENST00000555462 ZNF853P0CG23 659 aa20.85■□□□□ 0.93
PPP4R3A-208ENST00000555462 FKBP5Q13451 457 aaPredicted RBP20.85■□□□□ 0.93
PPP4R3A-208ENST00000555462 PNMA6EA0A0J9YXQ4 647 aa20.84■□□□□ 0.93
PPP4R3A-208ENST00000555462 IL25Q9H293 177 aa20.84■□□□□ 0.93
PPP4R3A-208ENST00000555462 ERC2O15083 957 aa20.84■□□□□ 0.93
PPP4R3A-208ENST00000555462 ARHGAP45Q92619 1136 aa20.84■□□□□ 0.93
PPP4R3A-208ENST00000555462 POGZQ7Z3K3 1410 aa20.84■□□□□ 0.93
PPP4R3A-208ENST00000555462 UQCRHLA0A096LP55 91 aa20.83■□□□□ 0.93
PPP4R3A-208ENST00000555462 UQCRHP07919 91 aa20.83■□□□□ 0.93
PPP4R3A-208ENST00000555462 PDE1AP54750 535 aa20.83■□□□□ 0.93
PPP4R3A-208ENST00000555462 CHMP4BQ9H444 224 aaKnown RBP20.83■□□□□ 0.93
PPP4R3A-208ENST00000555462 ADGRB2O60241 1585 aa20.83■□□□□ 0.92
PPP4R3A-208ENST00000555462 FAM135BQ49AJ0 1406 aa20.82■□□□□ 0.92
PPP4R3A-208ENST00000555462 YEATS2Q9ULM3 1422 aa20.82■□□□□ 0.92
PPP4R3A-208ENST00000555462 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.82■□□□□ 0.92
PPP4R3A-208ENST00000555462 REC8O95072 547 aa20.81■□□□□ 0.92
PPP4R3A-208ENST00000555462 PPP1R9BQ96SB3 815 aa20.81■□□□□ 0.92
PPP4R3A-208ENST00000555462 SLC52A1Q9NWF4 448 aa20.81■□□□□ 0.92
PPP4R3A-208ENST00000555462 ANXA1P04083 346 aa20.81■□□□□ 0.92
PPP4R3A-208ENST00000555462 C14orf37Q86TY3 774 aa20.81■□□□□ 0.92
PPP4R3A-208ENST00000555462 EIF2S2P20042 333 aaKnown RBP20.8■□□□□ 0.92
PPP4R3A-208ENST00000555462 PNPLA6Q8IY17 1366 aa20.8■□□□□ 0.92
PPP4R3A-208ENST00000555462 RIMS2Q9UQ26 1411 aa20.8■□□□□ 0.92
PPP4R3A-208ENST00000555462 WASLO00401 505 aaPredicted RBP20.79■□□□□ 0.92
PPP4R3A-208ENST00000555462 OFD1O75665 1012 aa20.79■□□□□ 0.92
PPP4R3A-208ENST00000555462 RTF1Q92541 710 aaKnown RBP20.79■□□□□ 0.92
PPP4R3A-208ENST00000555462 RTL1A6NKG5 1358 aa20.79■□□□□ 0.92
PPP4R3A-208ENST00000555462 USP25Q9UHP3 1055 aa20.78■□□□□ 0.92
PPP4R3A-208ENST00000555462 ISY1Q9ULR0 285 aaKnown RBP20.78■□□□□ 0.92
PPP4R3A-208ENST00000555462 PPLO60437 1756 aa20.78■□□□□ 0.92
PPP4R3A-208ENST00000555462 TTC12Q9H892 705 aaPredicted RBP20.78■□□□□ 0.92
PPP4R3A-208ENST00000555462 CYB5RLQ6IPT4 315 aa20.78■□□□□ 0.92
PPP4R3A-208ENST00000555462 SETBP1Q9Y6X0 1596 aa20.77■□□□□ 0.92
PPP4R3A-208ENST00000555462 LMOD3Q0VAK6 560 aa20.77■□□□□ 0.92
PPP4R3A-208ENST00000555462 USHBP1Q8N6Y0 703 aa20.77■□□□□ 0.92
PPP4R3A-208ENST00000555462 LRRFIP2Q9Y608 721 aaKnown RBP20.77■□□□□ 0.92
PPP4R3A-208ENST00000555462 UHRF1BP1LA0JNW5 1464 aa20.77■□□□□ 0.92
PPP4R3A-208ENST00000555462 FIBPO43427 364 aa20.77■□□□□ 0.92
PPP4R3A-208ENST00000555462 RPAP2Q8IXW5 612 aaPredicted RBP20.77■□□□□ 0.92
PPP4R3A-208ENST00000555462 IFT172Q9UG01 1749 aa20.77■□□□□ 0.92
PPP4R3A-208ENST00000555462 MYO3AQ8NEV4 1616 aa20.76■□□□□ 0.91
PPP4R3A-208ENST00000555462 ABCC3O15438 1527 aa20.76■□□□□ 0.91
PPP4R3A-208ENST00000555462 CYP2E1P05181 493 aaPredicted RBP20.76■□□□□ 0.91
PPP4R3A-208ENST00000555462 ZNF445P59923 1031 aa20.76■□□□□ 0.91
PPP4R3A-208ENST00000555462 SPG7Q9UQ90 795 aa20.76■□□□□ 0.91
PPP4R3A-208ENST00000555462 MTHFSDQ2M296 383 aaKnown RBP20.76■□□□□ 0.91
PPP4R3A-208ENST00000555462 ARHGEF28Q8N1W1 1705 aaKnown RBP20.75■□□□□ 0.91
PPP4R3A-208ENST00000555462 CFAP74Q9C0B2 1584 aa20.75■□□□□ 0.91
PPP4R3A-208ENST00000555462 PTPRMP28827 1452 aa20.75■□□□□ 0.91
PPP4R3A-208ENST00000555462 PTCH1Q13635 1447 aa20.75■□□□□ 0.91
PPP4R3A-208ENST00000555462 ZC3H13Q5T200 1668 aaKnown RBP20.75■□□□□ 0.91
PPP4R3A-208ENST00000555462 SLC26A8Q96RN1 970 aa20.75■□□□□ 0.91
PPP4R3A-208ENST00000555462 PUS7Q96PZ0 661 aaKnown RBP20.74■□□□□ 0.91
PPP4R3A-208ENST00000555462 CNPY2Q9Y2B0 182 aa20.74■□□□□ 0.91
PPP4R3A-208ENST00000555462 LRSAM1Q6UWE0 723 aa20.74■□□□□ 0.91
PPP4R3A-208ENST00000555462 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.74■□□□□ 0.91
PPP4R3A-208ENST00000555462 CCDC61Q9Y6R9 512 aa20.74■□□□□ 0.91
PPP4R3A-208ENST00000555462 USP48Q86UV5 1035 aa20.74■□□□□ 0.91
PPP4R3A-208ENST00000555462 RBM33Q96EV2 1170 aaKnown RBP20.74■□□□□ 0.91
PPP4R3A-208ENST00000555462 NEXMIFQ5QGS0 1516 aa20.73■□□□□ 0.91
PPP4R3A-208ENST00000555462 MED14O60244 1454 aa20.73■□□□□ 0.91
PPP4R3A-208ENST00000555462 SIGLEC1Q9BZZ2 1709 aa20.73■□□□□ 0.91
PPP4R3A-208ENST00000555462 TPM2P07951 284 aa20.73■□□□□ 0.91
PPP4R3A-208ENST00000555462 FRMPD1Q5SYB0 1578 aa20.73■□□□□ 0.91
PPP4R3A-208ENST00000555462 HMMRO75330 724 aa20.73■□□□□ 0.91
PPP4R3A-208ENST00000555462 HCLS1P14317 486 aaPredicted RBP20.73■□□□□ 0.91
PPP4R3A-208ENST00000555462 MX1P20591 662 aa20.73■□□□□ 0.91
PPP4R3A-208ENST00000555462 PTMSP20962 102 aa20.73■□□□□ 0.91
PPP4R3A-208ENST00000555462 SPC24Q8NBT2 197 aa20.73■□□□□ 0.91
PPP4R3A-208ENST00000555462 ESYT1Q9BSJ8 1104 aa20.73■□□□□ 0.91
PPP4R3A-208ENST00000555462 ABCA9Q8IUA7 1624 aa20.72■□□□□ 0.91
PPP4R3A-208ENST00000555462 CHL1O00533 1208 aa20.72■□□□□ 0.91
PPP4R3A-208ENST00000555462 TCEANC2Q96MN5 208 aa20.72■□□□□ 0.91
PPP4R3A-208ENST00000555462 BRPF1P55201 1214 aaPredicted RBP20.72■□□□□ 0.91
PPP4R3A-208ENST00000555462 CWC27Q6UX04 472 aaKnown RBP20.72■□□□□ 0.91
PPP4R3A-208ENST00000555462 STK31Q9BXU1 1019 aa20.72■□□□□ 0.91
PPP4R3A-208ENST00000555462 LRRCC1Q9C099 1032 aa20.72■□□□□ 0.91
PPP4R3A-208ENST00000555462 MAP2P11137 1827 aaKnown RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms