RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 BCL11BQ9C0K0 894 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC6B-205ENST00000555269 KIF24Q5T7B8 1368 aa16.96■□□□□ 0.31
TRAPPC6B-205ENST00000555269 OVOS2A0A0G2JMS6 1433 aa16.96■□□□□ 0.3
TRAPPC6B-205ENST00000555269 EIF4A2Q14240 407 aaKnown RBP16.95■□□□□ 0.3
TRAPPC6B-205ENST00000555269 LRRC37A3O60309 1634 aa16.95■□□□□ 0.3
TRAPPC6B-205ENST00000555269 NSD2O96028 1365 aa16.94■□□□□ 0.3
TRAPPC6B-205ENST00000555269 RAPGEF4Q8WZA2 1011 aa16.94■□□□□ 0.3
TRAPPC6B-205ENST00000555269 FOXD4L1Q9NU39 408 aa16.94■□□□□ 0.3
TRAPPC6B-205ENST00000555269 TATP17735 454 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC6B-205ENST00000555269 TNS2Q63HR2 1409 aa16.93■□□□□ 0.3
TRAPPC6B-205ENST00000555269 SMG6Q86US8 1419 aaKnown RBP16.93■□□□□ 0.3
TRAPPC6B-205ENST00000555269 RGPD2P0DJD1 1756 aa16.92■□□□□ 0.3
TRAPPC6B-205ENST00000555269 MAP2P11137 1827 aaKnown RBP16.91■□□□□ 0.3
TRAPPC6B-205ENST00000555269 PSDA5PKW4 1024 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC6B-205ENST00000555269 ZBTB22O15209 634 aa16.91■□□□□ 0.3
TRAPPC6B-205ENST00000555269 PROM2Q8N271 834 aa16.91■□□□□ 0.3
TRAPPC6B-205ENST00000555269 MEGF6O75095 1541 aa16.91■□□□□ 0.3
TRAPPC6B-205ENST00000555269 BCL9O00512 1426 aa16.9■□□□□ 0.3
TRAPPC6B-205ENST00000555269 MTHFSP49914 203 aa16.9■□□□□ 0.3
TRAPPC6B-205ENST00000555269 PLSCR1O15162 318 aa16.89■□□□□ 0.29
TRAPPC6B-205ENST00000555269 WNK3Q9BYP7 1800 aa16.89■□□□□ 0.29
TRAPPC6B-205ENST00000555269 RGPD1P0DJD0 1748 aa16.88■□□□□ 0.29
TRAPPC6B-205ENST00000555269 PRIM1P49642 420 aaKnown RBP16.88■□□□□ 0.29
TRAPPC6B-205ENST00000555269 R3HDM1Q15032 1099 aaKnown RBP16.88■□□□□ 0.29
TRAPPC6B-205ENST00000555269 SRCAPQ6ZRS2 3230 aa16.88■□□□□ 0.29
TRAPPC6B-205ENST00000555269 FAM208AQ9UK61 1670 aaKnown RBP16.88■□□□□ 0.29
TRAPPC6B-205ENST00000555269 CYP27B1O15528 508 aa16.87■□□□□ 0.29
TRAPPC6B-205ENST00000555269 SYTL4Q96C24 671 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC6B-205ENST00000555269 TNS1Q9HBL0 1735 aaKnown RBP16.87■□□□□ 0.29
TRAPPC6B-205ENST00000555269 MYCNP04198 464 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC6B-205ENST00000555269 IL13P35225 146 aa16.86■□□□□ 0.29
TRAPPC6B-205ENST00000555269 AEBP1Q8IUX7 1158 aa16.85■□□□□ 0.29
TRAPPC6B-205ENST00000555269 SPINK5Q9NQ38 1064 aaPredicted RBP16.85■□□□□ 0.29
TRAPPC6B-205ENST00000555269 ANKRD26Q9UPS8 1709 aa16.84■□□□□ 0.29
TRAPPC6B-205ENST00000555269 TXNRD1Q16881 649 aa16.84■□□□□ 0.29
TRAPPC6B-205ENST00000555269 NBPF14Q5TI25 921 aa16.83■□□□□ 0.28
TRAPPC6B-205ENST00000555269 SBF2Q86WG5 1849 aa16.83■□□□□ 0.28
TRAPPC6B-205ENST00000555269 IGSF1Q8N6C5 1336 aa16.83■□□□□ 0.28
TRAPPC6B-205ENST00000555269 PARD3Q8TEW0 1356 aa16.83■□□□□ 0.28
TRAPPC6B-205ENST00000555269 NPC1L1Q9UHC9 1359 aa16.83■□□□□ 0.28
TRAPPC6B-205ENST00000555269 SPG7Q9UQ90 795 aa16.83■□□□□ 0.28
TRAPPC6B-205ENST00000555269 NCAPD2Q15021 1401 aa16.82■□□□□ 0.28
TRAPPC6B-205ENST00000555269 SULT6B1Q6IMI4 303 aa16.82■□□□□ 0.28
TRAPPC6B-205ENST00000555269 KAT6BQ8WYB5 2073 aa16.82■□□□□ 0.28
TRAPPC6B-205ENST00000555269 PCDH11XQ9BZA7 1347 aa16.81■□□□□ 0.28
TRAPPC6B-205ENST00000555269 PCDH11YQ9BZA8 1340 aa16.81■□□□□ 0.28
TRAPPC6B-205ENST00000555269 KCNQ4P56696 695 aa16.8■□□□□ 0.28
TRAPPC6B-205ENST00000555269 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.8■□□□□ 0.286e-9■□□□□ 10.7
TRAPPC6B-205ENST00000555269 DIAPH1O60610 1272 aaKnown RBP16.79■□□□□ 0.28
TRAPPC6B-205ENST00000555269 DDX10Q13206 875 aaKnown RBP16.79■□□□□ 0.28
TRAPPC6B-205ENST00000555269 NKX1-1Q15270 411 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC6B-205ENST00000555269 MPRIPQ6WCQ1 1025 aa16.79■□□□□ 0.28
TRAPPC6B-205ENST00000555269 ANO8Q9HCE9 1232 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC6B-205ENST00000555269 LRRC4BQ9NT99 713 aa16.79■□□□□ 0.28
TRAPPC6B-205ENST00000555269 HMOX1P09601 288 aa16.78■□□□□ 0.28
TRAPPC6B-205ENST00000555269 PHKG2P15735 406 aa16.78■□□□□ 0.28
TRAPPC6B-205ENST00000555269 PLEKHO1Q53GL0 409 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC6B-205ENST00000555269 CAPN15O75808 1086 aa16.77■□□□□ 0.28
TRAPPC6B-205ENST00000555269 PPP2R1AP30153 589 aa16.77■□□□□ 0.28
TRAPPC6B-205ENST00000555269 IFNL2Q8IZJ0 200 aa16.77■□□□□ 0.28
TRAPPC6B-205ENST00000555269 ZEB1P37275 1124 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC6B-205ENST00000555269 PIGBQ92521 554 aa16.76■□□□□ 0.27
TRAPPC6B-205ENST00000555269 ZNF530Q6P9A1 599 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC6B-205ENST00000555269 SAMD1Q6SPF0 538 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC6B-205ENST00000555269 PDGFDQ9GZP0 370 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC6B-205ENST00000555269 SHANK3Q9BYB0 1731 aa16.75■□□□□ 0.27
TRAPPC6B-205ENST00000555269 U2SURPO15042 1029 aaKnown RBP16.74■□□□□ 0.27
TRAPPC6B-205ENST00000555269 AMOTQ4VCS5 1084 aa16.74■□□□□ 0.27
TRAPPC6B-205ENST00000555269 NHSQ6T4R5 1651 aa16.74■□□□□ 0.27
TRAPPC6B-205ENST00000555269 SLC15A2Q16348 729 aa16.73■□□□□ 0.27
TRAPPC6B-205ENST00000555269 STK32BQ9NY57 414 aa16.73■□□□□ 0.27
TRAPPC6B-205ENST00000555269 SLC27A3Q5K4L6 730 aa16.71■□□□□ 0.27
TRAPPC6B-205ENST00000555269 KDRP35968 1356 aa16.71■□□□□ 0.27
TRAPPC6B-205ENST00000555269 RREB1Q92766 1687 aa16.71■□□□□ 0.27
TRAPPC6B-205ENST00000555269 NUP188Q5SRE5 1749 aa16.7■□□□□ 0.26
TRAPPC6B-205ENST00000555269 BTAF1O14981 1849 aa16.7■□□□□ 0.26
TRAPPC6B-205ENST00000555269 ZNF827Q17R98 1081 aa16.7■□□□□ 0.26
TRAPPC6B-205ENST00000555269 CFAP53Q96M91 514 aa16.7■□□□□ 0.26
TRAPPC6B-205ENST00000555269 TMOD3Q9NYL9 352 aa16.7■□□□□ 0.26
TRAPPC6B-205ENST00000555269 CCNL1Q9UK58 526 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC6B-205ENST00000555269 ASAP1Q9ULH1 1129 aa16.7■□□□□ 0.26
TRAPPC6B-205ENST00000555269 MTHFSDQ2M296 383 aaKnown RBP16.69■□□□□ 0.26
TRAPPC6B-205ENST00000555269 C1orf141Q5JVX7 400 aa16.69■□□□□ 0.26
TRAPPC6B-205ENST00000555269 AKT1S1Q96B36 256 aa16.69■□□□□ 0.26
TRAPPC6B-205ENST00000555269 DCAF5Q96JK2 942 aa16.69■□□□□ 0.26
TRAPPC6B-205ENST00000555269 LGR6Q9HBX8 967 aa16.69■□□□□ 0.26
TRAPPC6B-205ENST00000555269 PKD1L3Q7Z443 1732 aa16.67■□□□□ 0.26
TRAPPC6B-205ENST00000555269 DOT1LQ8TEK3 1739 aa16.67■□□□□ 0.26
TRAPPC6B-205ENST00000555269 COL3A1P02461 1466 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC6B-205ENST00000555269 ERVV-2B6SEH9 535 aa16.67■□□□□ 0.26
TRAPPC6B-205ENST00000555269 HSP90AB1P08238 724 aaKnown RBP16.67■□□□□ 0.26
TRAPPC6B-205ENST00000555269 CABP4P57796 275 aa16.67■□□□□ 0.26
TRAPPC6B-205ENST00000555269 ATG3Q9NT62 314 aa16.67■□□□□ 0.26
TRAPPC6B-205ENST00000555269 PALLDQ8WX93 1383 aa16.66■□□□□ 0.26
TRAPPC6B-205ENST00000555269 ZBTB7AO95365 584 aa16.66■□□□□ 0.26
TRAPPC6B-205ENST00000555269 NFATC2IPQ8NCF5 419 aa16.66■□□□□ 0.26
TRAPPC6B-205ENST00000555269 SMARCC1Q92922 1105 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC6B-205ENST00000555269 PHACTR3Q96KR7 559 aa16.66■□□□□ 0.26
TRAPPC6B-205ENST00000555269 NUDCQ9Y266 331 aa16.66■□□□□ 0.26
TRAPPC6B-205ENST00000555269 ATF5Q9Y2D1 282 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms