RNA–Protein interactions for RNA: ENST00000555050.1

PSMA6-210, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 309 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-210ENST00000555050 KRT76Q01546 638 aa10.68□□□□□ -0.7
PSMA6-210ENST00000555050 FOXD4L5Q5VV16 416 aaPredicted RBP10.68□□□□□ -0.7
PSMA6-210ENST00000555050 BANK1Q8NDB2 785 aa10.68□□□□□ -0.7
PSMA6-210ENST00000555050 TRIM52Q96A61 297 aa10.68□□□□□ -0.7
PSMA6-210ENST00000555050 CYLDQ9NQC7 956 aa10.68□□□□□ -0.7
PSMA6-210ENST00000555050 GIGYF1O75420 1035 aaPredicted RBP10.66□□□□□ -0.7
PSMA6-210ENST00000555050 ITGA6P23229 1130 aa10.66□□□□□ -0.7
PSMA6-210ENST00000555050 SENP3-EIF4A1A0A087X0R7 540 aa10.65□□□□□ -0.7
PSMA6-210ENST00000555050 GPR37L1O60883 481 aa10.65□□□□□ -0.7
PSMA6-210ENST00000555050 CCDC125Q86Z20 511 aa10.65□□□□□ -0.7
PSMA6-210ENST00000555050 MTMR14Q8NCE2 650 aa10.65□□□□□ -0.7
PSMA6-210ENST00000555050 NR1H3Q13133 447 aa10.64□□□□□ -0.71
PSMA6-210ENST00000555050 CNTNAP3BQ96NU0 1288 aa10.63□□□□□ -0.71
PSMA6-210ENST00000555050 COL25A1Q9BXS0 654 aaPredicted RBP10.63□□□□□ -0.71
PSMA6-210ENST00000555050 CNTNAP3Q9BZ76 1288 aa10.63□□□□□ -0.71
PSMA6-210ENST00000555050 RSF1Q96T23 1441 aaPredicted RBP10.63□□□□□ -0.71
PSMA6-210ENST00000555050 MCCD1P59942 119 aaPredicted RBP10.62□□□□□ -0.71
PSMA6-210ENST00000555050 RNF20Q5VTR2 975 aa10.62□□□□□ -0.71
PSMA6-210ENST00000555050 ZNF592Q92610 1267 aa10.62□□□□□ -0.71
PSMA6-210ENST00000555050 NDUFB9Q9Y6M9 179 aa10.62□□□□□ -0.71
PSMA6-210ENST00000555050 ATP5J2-PTCD1G3V325 749 aa10.61□□□□□ -0.71
PSMA6-210ENST00000555050 ERVK-9P63128 1117 aa10.61□□□□□ -0.71
PSMA6-210ENST00000555050 LYSMD3Q7Z3D4 306 aa10.61□□□□□ -0.71
PSMA6-210ENST00000555050 ERCC6Q03468 1493 aa10.61□□□□□ -0.71
PSMA6-210ENST00000555050 CDC14CA4D256 554 aa10.6□□□□□ -0.71
PSMA6-210ENST00000555050 APBB1O00213 710 aa10.6□□□□□ -0.71
PSMA6-210ENST00000555050 RNF144AP50876 292 aaPredicted RBP10.6□□□□□ -0.71
PSMA6-210ENST00000555050 RNFT1Q5M7Z0 435 aa10.6□□□□□ -0.71
PSMA6-210ENST00000555050 VWA5B2Q8N398 1253 aa10.6□□□□□ -0.71
PSMA6-210ENST00000555050 CC2D2BQ6DHV5 1058 aa10.59□□□□□ -0.71
PSMA6-210ENST00000555050 SV2AQ7L0J3 742 aa10.59□□□□□ -0.71
PSMA6-210ENST00000555050 ZNF330Q9Y3S2 320 aaPredicted RBP10.59□□□□□ -0.71
PSMA6-210ENST00000555050 WIZO95785 1651 aa10.59□□□□□ -0.71
PSMA6-210ENST00000555050 NESP48681 1621 aa10.58□□□□□ -0.72
PSMA6-210ENST00000555050 SNRKQ9NRH2 765 aa10.58□□□□□ -0.72
PSMA6-210ENST00000555050 LAMC3Q9Y6N6 1575 aa10.57□□□□□ -0.72
PSMA6-210ENST00000555050 GPC1P35052 558 aa10.57□□□□□ -0.72
PSMA6-210ENST00000555050 TPRNQ4KMQ1 711 aa10.56□□□□□ -0.72
PSMA6-210ENST00000555050 PRICKLE2Q7Z3G6 844 aa10.56□□□□□ -0.72
PSMA6-210ENST00000555050 CUX2O14529 1486 aa10.55□□□□□ -0.72
PSMA6-210ENST00000555050 A0A1W2PRU2 124 aa10.55□□□□□ -0.72
PSMA6-210ENST00000555050 MEN1O00255 615 aa10.55□□□□□ -0.72
PSMA6-210ENST00000555050 SLURP2P0DP57 97 aa10.55□□□□□ -0.72
PSMA6-210ENST00000555050 SCTRP47872 440 aa10.55□□□□□ -0.72
PSMA6-210ENST00000555050 CYP2U1Q7Z449 544 aa10.55□□□□□ -0.72
PSMA6-210ENST00000555050 CADPSQ9ULU8 1353 aa10.54□□□□□ -0.72
PSMA6-210ENST00000555050 CUEDC1Q9NWM3 386 aaPredicted RBP10.54□□□□□ -0.72
PSMA6-210ENST00000555050 PCDHB11Q9Y5F2 797 aa10.54□□□□□ -0.72
PSMA6-210ENST00000555050 TOP2AP11388 1531 aaKnown RBP10.53□□□□□ -0.72
PSMA6-210ENST00000555050 PDS5BQ9NTI5 1447 aa10.53□□□□□ -0.72
PSMA6-210ENST00000555050 TRAK2O60296 914 aa10.53□□□□□ -0.72
PSMA6-210ENST00000555050 RHOQP17081 205 aa10.53□□□□□ -0.72
PSMA6-210ENST00000555050 ZNF385CQ66K41 422 aaPredicted RBP10.53□□□□□ -0.72
PSMA6-210ENST00000555050 CLN3Q13286 438 aa10.52□□□□□ -0.73
PSMA6-210ENST00000555050 OSBPL3Q9H4L5 887 aa10.52□□□□□ -0.73
PSMA6-210ENST00000555050 KCNMA1Q12791 1236 aa10.51□□□□□ -0.73
PSMA6-210ENST00000555050 SVOPQ8N4V2 548 aa10.5□□□□□ -0.73
PSMA6-210ENST00000555050 NLRP3Q96P20 1036 aa10.5□□□□□ -0.73
PSMA6-210ENST00000555050 ADAMTS8Q9UP79 889 aa10.5□□□□□ -0.73
PSMA6-210ENST00000555050 GSK3AP49840 483 aa10.49□□□□□ -0.73
PSMA6-210ENST00000555050 GAS6Q14393 721 aa10.49□□□□□ -0.73
PSMA6-210ENST00000555050 SLC27A3Q5K4L6 730 aa10.49□□□□□ -0.73
PSMA6-210ENST00000555050 TRIM22Q8IYM9 498 aa10.49□□□□□ -0.73
PSMA6-210ENST00000555050 ZNF837Q96EG3 531 aaPredicted RBP10.49□□□□□ -0.73
PSMA6-210ENST00000555050 GMCL1Q96IK5 515 aa10.49□□□□□ -0.73
PSMA6-210ENST00000555050 GRIP2Q9C0E4 1043 aa10.49□□□□□ -0.73
PSMA6-210ENST00000555050 ARHGEF10LQ9HCE6 1279 aa10.49□□□□□ -0.73
PSMA6-210ENST00000555050 WHAMMQ8TF30 809 aa10.48□□□□□ -0.73
PSMA6-210ENST00000555050 CEP126Q9P2H0 1117 aa10.48□□□□□ -0.73
PSMA6-210ENST00000555050 TBC1D2BQ9UPU7 963 aa10.48□□□□□ -0.73
PSMA6-210ENST00000555050 DYRK1BQ9Y463 629 aa10.48□□□□□ -0.73
PSMA6-210ENST00000555050 SPATA31C2B4DYI2 1134 aa10.47□□□□□ -0.73
PSMA6-210ENST00000555050 ADAMTS2O95450 1211 aa10.47□□□□□ -0.73
PSMA6-210ENST00000555050 SRSF11Q05519 484 aaKnown RBP10.47□□□□□ -0.73
PSMA6-210ENST00000555050 POU4F2Q12837 409 aa10.47□□□□□ -0.73
PSMA6-210ENST00000555050 ESF1Q9H501 851 aaKnown RBP10.47□□□□□ -0.73
PSMA6-210ENST00000555050 ARHGEF15O94989 841 aa10.46□□□□□ -0.73
PSMA6-210ENST00000555050 NBPF10Q6P3W6 841 aaKnown RBP10.46□□□□□ -0.73
PSMA6-210ENST00000555050 NBPF15Q8N660 670 aa10.46□□□□□ -0.73
PSMA6-210ENST00000555050 CCDC85AQ96PX6 553 aaPredicted RBP10.46□□□□□ -0.73
PSMA6-210ENST00000555050 CFTRP13569 1480 aa10.46□□□□□ -0.74
PSMA6-210ENST00000555050 RNF225M0QZC1 329 aaPredicted RBP10.45□□□□□ -0.74
PSMA6-210ENST00000555050 GNRH1P01148 92 aa10.45□□□□□ -0.74
PSMA6-210ENST00000555050 WDR44Q5JSH3 913 aa10.45□□□□□ -0.74
PSMA6-210ENST00000555050 THOC2Q8NI27 1593 aaKnown RBP10.44□□□□□ -0.74
PSMA6-210ENST00000555050 DBN1Q16643 649 aa10.44□□□□□ -0.74
PSMA6-210ENST00000555050 RIPOR1Q6ZS17 1223 aa10.44□□□□□ -0.74
PSMA6-210ENST00000555050 CDCA7Q9BWT1 371 aaPredicted RBP10.44□□□□□ -0.74
PSMA6-210ENST00000555050 PRM3Q9NNZ6 103 aa10.44□□□□□ -0.74
PSMA6-210ENST00000555050 RAB6BQ9NRW1 208 aa10.44□□□□□ -0.74
PSMA6-210ENST00000555050 H7C1W4 665 aa10.43□□□□□ -0.74
PSMA6-210ENST00000555050 WASLO00401 505 aaPredicted RBP10.43□□□□□ -0.74
PSMA6-210ENST00000555050 MYCP01106 439 aaPredicted RBP10.43□□□□□ -0.74
PSMA6-210ENST00000555050 IRF5Q13568 498 aa10.43□□□□□ -0.74
PSMA6-210ENST00000555050 ESYT1Q9BSJ8 1104 aa10.43□□□□□ -0.74
PSMA6-210ENST00000555050 IL2RAP01589 272 aa10.42□□□□□ -0.74
PSMA6-210ENST00000555050 EIF4G2P78344 907 aaKnown RBP eCLIP10.42□□□□□ -0.74
PSMA6-210ENST00000555050 FOXR1Q6PIV2 292 aa10.42□□□□□ -0.74
PSMA6-210ENST00000555050 TAS1R3Q7RTX0 852 aa10.42□□□□□ -0.74
PSMA6-210ENST00000555050 CNKSR1Q969H4 720 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms