RNA–Protein interactions for RNA: ENST00000554843.5

PSMA6-208, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-208ENST00000554843 PRKAR2BP31323 418 aa19.72■□□□□ 0.75
PSMA6-208ENST00000554843 TNS2Q63HR2 1409 aa19.72■□□□□ 0.75
PSMA6-208ENST00000554843 SHANK3Q9BYB0 1731 aa19.71■□□□□ 0.75
PSMA6-208ENST00000554843 RBM6P78332 1123 aaKnown RBP19.7■□□□□ 0.74
PSMA6-208ENST00000554843 FAM9BQ8IZU0 186 aa19.7■□□□□ 0.74
PSMA6-208ENST00000554843 PLEKHF1Q96S99 279 aa19.7■□□□□ 0.74
PSMA6-208ENST00000554843 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.69■□□□□ 0.74
PSMA6-208ENST00000554843 ONECUT3O60422 494 aaPredicted RBP19.68■□□□□ 0.74
PSMA6-208ENST00000554843 RUNDC1Q96C34 613 aa19.68■□□□□ 0.74
PSMA6-208ENST00000554843 MAPK8IP3Q9UPT6 1336 aa19.68■□□□□ 0.74
PSMA6-208ENST00000554843 NEFMP07197 916 aa19.67■□□□□ 0.74
PSMA6-208ENST00000554843 FAM98CQ17RN3 349 aaKnown RBP19.67■□□□□ 0.74
PSMA6-208ENST00000554843 AMOTQ4VCS5 1084 aa19.67■□□□□ 0.74
PSMA6-208ENST00000554843 POTEAQ6S8J7 498 aa19.66■□□□□ 0.74
PSMA6-208ENST00000554843 PLEKHO1Q53GL0 409 aaPredicted RBP19.65■□□□□ 0.74
PSMA6-208ENST00000554843 CCDC146Q8IYE0 955 aa19.65■□□□□ 0.74
PSMA6-208ENST00000554843 GAS2L2Q8NHY3 880 aa19.65■□□□□ 0.74
PSMA6-208ENST00000554843 RXRBP28702 533 aa19.64■□□□□ 0.73
PSMA6-208ENST00000554843 PHACTR3Q96KR7 559 aa19.64■□□□□ 0.73
PSMA6-208ENST00000554843 SPG7Q9UQ90 795 aa19.64■□□□□ 0.73
PSMA6-208ENST00000554843 PCDH11XQ9BZA7 1347 aa19.64■□□□□ 0.73
PSMA6-208ENST00000554843 PCDH11YQ9BZA8 1340 aa19.64■□□□□ 0.73
PSMA6-208ENST00000554843 RGS12O14924 1447 aa19.63■□□□□ 0.73
PSMA6-208ENST00000554843 ZCRB1Q8TBF4 217 aaKnown RBP19.63■□□□□ 0.73
PSMA6-208ENST00000554843 DDB1Q16531 1140 aa19.62■□□□□ 0.73
PSMA6-208ENST00000554843 NFE2L2Q16236 605 aa19.61■□□□□ 0.73
PSMA6-208ENST00000554843 MTHFSDQ2M296 383 aaKnown RBP19.61■□□□□ 0.73
PSMA6-208ENST00000554843 DLG5Q8TDM6 1919 aa19.61■□□□□ 0.73
PSMA6-208ENST00000554843 ADAMTS7Q9UKP4 1686 aa19.6■□□□□ 0.73
PSMA6-208ENST00000554843 A0A0G2JS52 829 aa19.6■□□□□ 0.73
PSMA6-208ENST00000554843 EXOC5O00471 708 aa19.6■□□□□ 0.73
PSMA6-208ENST00000554843 MYT1Q01538 1121 aa19.6■□□□□ 0.73
PSMA6-208ENST00000554843 ZNF530Q6P9A1 599 aaPredicted RBP19.6■□□□□ 0.73
PSMA6-208ENST00000554843 SEPT12Q8IYM1 358 aa19.6■□□□□ 0.73
PSMA6-208ENST00000554843 MAP3K5Q99683 1374 aa19.59■□□□□ 0.73
PSMA6-208ENST00000554843 NCBP3Q53F19 620 aaKnown RBP19.59■□□□□ 0.73
PSMA6-208ENST00000554843 BRWD3Q6RI45 1802 aa19.59■□□□□ 0.73
PSMA6-208ENST00000554843 APAF1O14727 1248 aa19.58■□□□□ 0.72
PSMA6-208ENST00000554843 CYP27B1O15528 508 aa19.58■□□□□ 0.72
PSMA6-208ENST00000554843 PHKG2P15735 406 aa19.58■□□□□ 0.72
PSMA6-208ENST00000554843 TMPOP42166 694 aaKnown RBP19.58■□□□□ 0.72
PSMA6-208ENST00000554843 AKAP4Q5JQC9 854 aa19.58■□□□□ 0.72
PSMA6-208ENST00000554843 IFNL2Q8IZJ0 200 aa19.58■□□□□ 0.72
PSMA6-208ENST00000554843 C1orf141Q5JVX7 400 aa19.57■□□□□ 0.72
PSMA6-208ENST00000554843 HSP90AB1P08238 724 aaKnown RBP19.56■□□□□ 0.72
PSMA6-208ENST00000554843 NGEFQ8N5V2 710 aa19.56■□□□□ 0.72
PSMA6-208ENST00000554843 BCL9O00512 1426 aa19.56■□□□□ 0.72
PSMA6-208ENST00000554843 SCN11AQ9UI33 1791 aa19.55■□□□□ 0.72
PSMA6-208ENST00000554843 KDM6AO15550 1401 aaPredicted RBP19.55■□□□□ 0.72
PSMA6-208ENST00000554843 HTATSF1O43719 755 aaKnown RBP19.55■□□□□ 0.72
PSMA6-208ENST00000554843 LMOD3Q0VAK6 560 aa19.55■□□□□ 0.72
PSMA6-208ENST00000554843 PDE3BQ13370 1112 aa19.55■□□□□ 0.72
PSMA6-208ENST00000554843 NKX1-1Q15270 411 aaPredicted RBP19.55■□□□□ 0.72
PSMA6-208ENST00000554843 VIRMAQ69YN4 1812 aaKnown RBP19.55■□□□□ 0.72
PSMA6-208ENST00000554843 MRC1P22897 1456 aa19.54■□□□□ 0.72
PSMA6-208ENST00000554843 TOGARAM1Q9Y4F4 1720 aa19.54■□□□□ 0.72
PSMA6-208ENST00000554843 GNAT3A8MTJ3 354 aa19.54■□□□□ 0.72
PSMA6-208ENST00000554843 RIPK4P57078 832 aa19.53■□□□□ 0.72
PSMA6-208ENST00000554843 CCDC27Q2M243 656 aa19.53■□□□□ 0.72
PSMA6-208ENST00000554843 MARCH10Q8NA82 808 aaPredicted RBP19.53■□□□□ 0.72
PSMA6-208ENST00000554843 DDX54Q8TDD1 881 aaKnown RBP19.53■□□□□ 0.72
PSMA6-208ENST00000554843 RRP7AQ9Y3A4 280 aaKnown RBP19.53■□□□□ 0.72
PSMA6-208ENST00000554843 DOT1LQ8TEK3 1739 aa19.53■□□□□ 0.72
PSMA6-208ENST00000554843 KRT27Q7Z3Y8 459 aa19.52■□□□□ 0.72
PSMA6-208ENST00000554843 DCAF5Q96JK2 942 aa19.52■□□□□ 0.72
PSMA6-208ENST00000554843 CEMIPQ8WUJ3 1361 aa19.52■□□□□ 0.72
PSMA6-208ENST00000554843 RTF1Q92541 710 aaKnown RBP19.5■□□□□ 0.71
PSMA6-208ENST00000554843 TRIM35Q9UPQ4 493 aa19.5■□□□□ 0.71
PSMA6-208ENST00000554843 RNMTO43148 476 aaKnown RBP19.49■□□□□ 0.71
PSMA6-208ENST00000554843 NEUROD2Q15784 382 aa19.49■□□□□ 0.71
PSMA6-208ENST00000554843 NHSQ6T4R5 1651 aa19.49■□□□□ 0.71
PSMA6-208ENST00000554843 SIPA1L3O60292 1781 aaPredicted RBP19.48■□□□□ 0.71
PSMA6-208ENST00000554843 HNRNPUQ00839 825 aaKnown RBP eCLIP19.48■□□□□ 0.71
PSMA6-208ENST00000554843 MPRIPQ6WCQ1 1025 aa19.48■□□□□ 0.71
PSMA6-208ENST00000554843 ZNF521Q96K83 1311 aa19.47■□□□□ 0.71
PSMA6-208ENST00000554843 SBF2Q86WG5 1849 aa19.46■□□□□ 0.71
PSMA6-208ENST00000554843 WWC1Q8IX03 1113 aa19.46■□□□□ 0.71
PSMA6-208ENST00000554843 IL17REQ8NFR9 667 aa19.46■□□□□ 0.71
PSMA6-208ENST00000554843 ITGB4P16144 1822 aa19.46■□□□□ 0.71
PSMA6-208ENST00000554843 ERVV-2B6SEH9 535 aa19.45■□□□□ 0.7
PSMA6-208ENST00000554843 MCM10Q7L590 875 aa19.45■□□□□ 0.7
PSMA6-208ENST00000554843 LGR6Q9HBX8 967 aa19.45■□□□□ 0.7
PSMA6-208ENST00000554843 ZBED9Q6R2W3 1325 aa19.45■□□□□ 0.7
PSMA6-208ENST00000554843 SENP3-EIF4A1A0A087X0R7 540 aa19.44■□□□□ 0.7
PSMA6-208ENST00000554843 CALD1Q05682 793 aaKnown RBP19.44■□□□□ 0.7
PSMA6-208ENST00000554843 DCTN1Q14203 1278 aa19.44■□□□□ 0.7
PSMA6-208ENST00000554843 FAM196AQ6ZSG2 479 aa19.44■□□□□ 0.7
PSMA6-208ENST00000554843 PAPPAQ13219 1627 aa19.43■□□□□ 0.7
PSMA6-208ENST00000554843 THUMPD2Q9BTF0 503 aaKnown RBP19.43■□□□□ 0.7
PSMA6-208ENST00000554843 SLC52A2Q9HAB3 445 aa19.43■□□□□ 0.7
PSMA6-208ENST00000554843 SALL2Q9Y467 1007 aaPredicted RBP19.42■□□□□ 0.7
PSMA6-208ENST00000554843 IL16Q14005 1332 aa19.42■□□□□ 0.7
PSMA6-208ENST00000554843 CABP4P57796 275 aa19.41■□□□□ 0.7
PSMA6-208ENST00000554843 TEFQ10587 303 aa19.41■□□□□ 0.7
PSMA6-208ENST00000554843 FAM182BQ5T319 152 aa19.41■□□□□ 0.7
PSMA6-208ENST00000554843 WDR63Q8IWG1 891 aa19.41■□□□□ 0.7
PSMA6-208ENST00000554843 KDM3BQ7LBC6 1761 aa19.41■□□□□ 0.7
PSMA6-208ENST00000554843 TMOD3Q9NYL9 352 aa19.4■□□□□ 0.7
PSMA6-208ENST00000554843 KAT6BQ8WYB5 2073 aa19.39■□□□□ 0.69
PSMA6-208ENST00000554843 BABAM1Q9NWV8 329 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms