RNA–Protein interactions for RNA: ENST00000554813.5

APEX1-208, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-208ENST00000554813 ACSBG1Q96GR2 724 aa17.96■□□□□ 0.47
APEX1-208ENST00000554813 MEGF6O75095 1541 aa17.96■□□□□ 0.47
APEX1-208ENST00000554813 SBF2Q86WG5 1849 aa17.95■□□□□ 0.46
APEX1-208ENST00000554813 KCNQ2O43526 872 aa17.95■□□□□ 0.46
APEX1-208ENST00000554813 CNGB1Q14028 1251 aaPredicted RBP17.95■□□□□ 0.46
APEX1-208ENST00000554813 PTF1AQ7RTS3 328 aa17.95■□□□□ 0.46
APEX1-208ENST00000554813 MTHFSP49914 203 aa17.94■□□□□ 0.46
APEX1-208ENST00000554813 SPG7Q9UQ90 795 aa17.94■□□□□ 0.46
APEX1-208ENST00000554813 PCDH11XQ9BZA7 1347 aa17.93■□□□□ 0.46
APEX1-208ENST00000554813 PCDH11YQ9BZA8 1340 aa17.93■□□□□ 0.46
APEX1-208ENST00000554813 NCAPD2Q15021 1401 aa17.92■□□□□ 0.46
APEX1-208ENST00000554813 NBPF14Q5TI25 921 aa17.92■□□□□ 0.46
APEX1-208ENST00000554813 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.92■□□□□ 0.468e-8■□□□□ 10.1
APEX1-208ENST00000554813 IGSF1Q8N6C5 1336 aa17.91■□□□□ 0.46
APEX1-208ENST00000554813 PRIM1P49642 420 aaKnown RBP17.9■□□□□ 0.46
APEX1-208ENST00000554813 SYTL4Q96C24 671 aaPredicted RBP17.9■□□□□ 0.46
APEX1-208ENST00000554813 IL13P35225 146 aa17.89■□□□□ 0.45
APEX1-208ENST00000554813 KAT6BQ8WYB5 2073 aa17.89■□□□□ 0.45
APEX1-208ENST00000554813 CYP27B1O15528 508 aa17.88■□□□□ 0.45
APEX1-208ENST00000554813 NHSQ6T4R5 1651 aa17.87■□□□□ 0.45
APEX1-208ENST00000554813 PSDA5PKW4 1024 aaPredicted RBP17.87■□□□□ 0.45
APEX1-208ENST00000554813 DIAPH1O60610 1272 aaKnown RBP17.87■□□□□ 0.45
APEX1-208ENST00000554813 R3HDM1Q15032 1099 aaKnown RBP17.87■□□□□ 0.45
APEX1-208ENST00000554813 TXNRD1Q16881 649 aa17.87■□□□□ 0.45
APEX1-208ENST00000554813 PROM2Q8N271 834 aa17.87■□□□□ 0.45
APEX1-208ENST00000554813 PLEKHG2Q9H7P9 1386 aa17.87■□□□□ 0.45
APEX1-208ENST00000554813 PLEKHO1Q53GL0 409 aaPredicted RBP17.86■□□□□ 0.45
APEX1-208ENST00000554813 SULT6B1Q6IMI4 303 aa17.86■□□□□ 0.45
APEX1-208ENST00000554813 IFNL2Q8IZJ0 200 aa17.86■□□□□ 0.45
APEX1-208ENST00000554813 RGPD3A6NKT7 1758 aaPredicted RBP17.85■□□□□ 0.45
APEX1-208ENST00000554813 NKX1-1Q15270 411 aaPredicted RBP17.85■□□□□ 0.45
APEX1-208ENST00000554813 AMOTQ4VCS5 1084 aa17.85■□□□□ 0.45
APEX1-208ENST00000554813 RGPD4Q7Z3J3 1758 aa17.85■□□□□ 0.45
APEX1-208ENST00000554813 SHANK3Q9BYB0 1731 aa17.85■□□□□ 0.45
APEX1-208ENST00000554813 CFAP53Q96M91 514 aa17.84■□□□□ 0.45
APEX1-208ENST00000554813 RREB1Q92766 1687 aa17.83■□□□□ 0.45
APEX1-208ENST00000554813 PHKG2P15735 406 aa17.83■□□□□ 0.44
APEX1-208ENST00000554813 AEBP1Q8IUX7 1158 aa17.83■□□□□ 0.44
APEX1-208ENST00000554813 PKD1L3Q7Z443 1732 aa17.82■□□□□ 0.44
APEX1-208ENST00000554813 BTAF1O14981 1849 aa17.82■□□□□ 0.44
APEX1-208ENST00000554813 KDRP35968 1356 aa17.81■□□□□ 0.44
APEX1-208ENST00000554813 HSP90AB1P08238 724 aaKnown RBP17.81■□□□□ 0.44
APEX1-208ENST00000554813 PPP2R1AP30153 589 aa17.81■□□□□ 0.44
APEX1-208ENST00000554813 DDX10Q13206 875 aaKnown RBP17.81■□□□□ 0.44
APEX1-208ENST00000554813 MPRIPQ6WCQ1 1025 aa17.81■□□□□ 0.44
APEX1-208ENST00000554813 NUP188Q5SRE5 1749 aa17.81■□□□□ 0.44
APEX1-208ENST00000554813 SLC27A3Q5K4L6 730 aa17.8■□□□□ 0.44
APEX1-208ENST00000554813 ZNF530Q6P9A1 599 aaPredicted RBP17.8■□□□□ 0.44
APEX1-208ENST00000554813 STK32BQ9NY57 414 aa17.8■□□□□ 0.44
APEX1-208ENST00000554813 DOT1LQ8TEK3 1739 aa17.8■□□□□ 0.44
APEX1-208ENST00000554813 U2SURPO15042 1029 aaKnown RBP17.79■□□□□ 0.44
APEX1-208ENST00000554813 HMOX1P09601 288 aa17.79■□□□□ 0.44
APEX1-208ENST00000554813 C1orf141Q5JVX7 400 aa17.79■□□□□ 0.44
APEX1-208ENST00000554813 HMGB2P26583 209 aaKnown RBP17.78■□□□□ 0.44
APEX1-208ENST00000554813 DCAF5Q96JK2 942 aa17.78■□□□□ 0.44
APEX1-208ENST00000554813 NUDCQ9Y266 331 aa17.78■□□□□ 0.44
APEX1-208ENST00000554813 SMARCC1Q92922 1105 aaPredicted RBP17.77■□□□□ 0.44
APEX1-208ENST00000554813 TMOD3Q9NYL9 352 aa17.77■□□□□ 0.44
APEX1-208ENST00000554813 ERVV-2B6SEH9 535 aa17.76■□□□□ 0.43
APEX1-208ENST00000554813 SLC15A2Q16348 729 aa17.76■□□□□ 0.43
APEX1-208ENST00000554813 PIGBQ92521 554 aa17.76■□□□□ 0.43
APEX1-208ENST00000554813 ANO8Q9HCE9 1232 aaPredicted RBP17.76■□□□□ 0.43
APEX1-208ENST00000554813 LRRC4BQ9NT99 713 aa17.76■□□□□ 0.43
APEX1-208ENST00000554813 CCNL1Q9UK58 526 aaPredicted RBP17.75■□□□□ 0.43
APEX1-208ENST00000554813 COL3A1P02461 1466 aaPredicted RBP17.75■□□□□ 0.43
APEX1-208ENST00000554813 RALBP1Q15311 655 aa17.74■□□□□ 0.43
APEX1-208ENST00000554813 AKAP4Q5JQC9 854 aa17.73■□□□□ 0.43
APEX1-208ENST00000554813 PALLDQ8WX93 1383 aa17.72■□□□□ 0.43
APEX1-208ENST00000554813 KCNQ4P56696 695 aa17.72■□□□□ 0.43
APEX1-208ENST00000554813 CABP4P57796 275 aa17.72■□□□□ 0.43
APEX1-208ENST00000554813 SRCAPQ6ZRS2 3230 aa17.72■□□□□ 0.43
APEX1-208ENST00000554813 ITGB4P16144 1822 aa17.71■□□□□ 0.43
APEX1-208ENST00000554813 U2AF1L5P0DN76 240 aaPredicted RBP17.71■□□□□ 0.43
APEX1-208ENST00000554813 U2AF1Q01081 240 aaKnown RBP eCLIP17.71■□□□□ 0.43
APEX1-208ENST00000554813 MTHFSDQ2M296 383 aaKnown RBP17.71■□□□□ 0.43
APEX1-208ENST00000554813 TOGARAM1Q9Y4F4 1720 aa17.7■□□□□ 0.42
APEX1-208ENST00000554813 AKT1S1Q96B36 256 aa17.7■□□□□ 0.42
APEX1-208ENST00000554813 ASAP1Q9ULH1 1129 aa17.7■□□□□ 0.42
APEX1-208ENST00000554813 FCHSD2O94868 740 aa17.69■□□□□ 0.42
APEX1-208ENST00000554813 SPON1Q9HCB6 807 aa17.69■□□□□ 0.42
APEX1-208ENST00000554813 TFCP2L1Q9NZI6 479 aa17.69■□□□□ 0.42
APEX1-208ENST00000554813 LY75O60449 1722 aa17.69■□□□□ 0.42
APEX1-208ENST00000554813 ZNF827Q17R98 1081 aa17.68■□□□□ 0.42
APEX1-208ENST00000554813 NFATC2IPQ8NCF5 419 aa17.68■□□□□ 0.42
APEX1-208ENST00000554813 GAS2L2Q8NHY3 880 aa17.68■□□□□ 0.42
APEX1-208ENST00000554813 ATG3Q9NT62 314 aa17.68■□□□□ 0.42
APEX1-208ENST00000554813 KDM6AO15550 1401 aaPredicted RBP17.67■□□□□ 0.42
APEX1-208ENST00000554813 LOC102724428A0A0B4J2F2 783 aa17.67■□□□□ 0.42
APEX1-208ENST00000554813 PRKAR2BP31323 418 aa17.67■□□□□ 0.42
APEX1-208ENST00000554813 SIK1P57059 783 aa17.67■□□□□ 0.42
APEX1-208ENST00000554813 RSPH6AQ9H0K4 717 aa17.67■□□□□ 0.42
APEX1-208ENST00000554813 PDGFDQ9GZP0 370 aaPredicted RBP17.66■□□□□ 0.42
APEX1-208ENST00000554813 LGR6Q9HBX8 967 aa17.66■□□□□ 0.42
APEX1-208ENST00000554813 LRP5O75197 1615 aa17.65■□□□□ 0.42
APEX1-208ENST00000554813 PAPPAQ13219 1627 aa17.65■□□□□ 0.42
APEX1-208ENST00000554813 ZNF316A6NFI3 1004 aaPredicted RBP17.65■□□□□ 0.42
APEX1-208ENST00000554813 RNMTO43148 476 aaKnown RBP17.65■□□□□ 0.42
APEX1-208ENST00000554813 GNAT3A8MTJ3 354 aa17.64■□□□□ 0.41
APEX1-208ENST00000554813 ZBTB7AO95365 584 aa17.64■□□□□ 0.41
APEX1-208ENST00000554813 ATP6V1AP38606 617 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms