RNA–Protein interactions for RNA: ENST00000554768.5

MTHFD1-209, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-209ENST00000554768 BAG6P46379 1132 aa17.46■□□□□ 0.39
MTHFD1-209ENST00000554768 BCL11BQ9C0K0 894 aaPredicted RBP17.46■□□□□ 0.39
MTHFD1-209ENST00000554768 EN1Q05925 392 aaPredicted RBP17.45■□□□□ 0.38
MTHFD1-209ENST00000554768 KCNQ2O43526 872 aa17.44■□□□□ 0.38
MTHFD1-209ENST00000554768 DIAPH1O60610 1272 aaKnown RBP17.44■□□□□ 0.38
MTHFD1-209ENST00000554768 AEBP1Q8IUX7 1158 aa17.44■□□□□ 0.38
MTHFD1-209ENST00000554768 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.44■□□□□ 0.386e-7■□□□□ 10.9
MTHFD1-209ENST00000554768 CYP27B1O15528 508 aa17.43■□□□□ 0.38
MTHFD1-209ENST00000554768 SULT6B1Q6IMI4 303 aa17.43■□□□□ 0.38
MTHFD1-209ENST00000554768 CAMKK2Q96RR4 588 aa17.43■□□□□ 0.38
MTHFD1-209ENST00000554768 ZNF316A6NFI3 1004 aaPredicted RBP17.42■□□□□ 0.38
MTHFD1-209ENST00000554768 ACSBG1Q96GR2 724 aa17.42■□□□□ 0.38
MTHFD1-209ENST00000554768 SPG7Q9UQ90 795 aa17.42■□□□□ 0.38
MTHFD1-209ENST00000554768 PARD3Q8TEW0 1356 aa17.41■□□□□ 0.38
MTHFD1-209ENST00000554768 PCDH11XQ9BZA7 1347 aa17.41■□□□□ 0.38
MTHFD1-209ENST00000554768 PCDH11YQ9BZA8 1340 aa17.41■□□□□ 0.38
MTHFD1-209ENST00000554768 KDRP35968 1356 aa17.4■□□□□ 0.38
MTHFD1-209ENST00000554768 PLSCR1O15162 318 aa17.4■□□□□ 0.38
MTHFD1-209ENST00000554768 EZH2Q15910 746 aaKnown RBP17.4■□□□□ 0.38
MTHFD1-209ENST00000554768 PLEKHG2Q9H7P9 1386 aa17.4■□□□□ 0.38
MTHFD1-209ENST00000554768 COL3A1P02461 1466 aaPredicted RBP17.39■□□□□ 0.37
MTHFD1-209ENST00000554768 RGPD1P0DJD0 1748 aa17.39■□□□□ 0.37
MTHFD1-209ENST00000554768 CFAP53Q96M91 514 aa17.39■□□□□ 0.37
MTHFD1-209ENST00000554768 PRIM1P49642 420 aaKnown RBP17.38■□□□□ 0.37
MTHFD1-209ENST00000554768 NKX1-1Q15270 411 aaPredicted RBP17.38■□□□□ 0.37
MTHFD1-209ENST00000554768 RALBP1Q15311 655 aa17.38■□□□□ 0.37
MTHFD1-209ENST00000554768 PLEKHO1Q53GL0 409 aaPredicted RBP17.38■□□□□ 0.37
MTHFD1-209ENST00000554768 HMOX1P09601 288 aa17.37■□□□□ 0.37
MTHFD1-209ENST00000554768 TNS1Q9HBL0 1735 aaKnown RBP17.37■□□□□ 0.37
MTHFD1-209ENST00000554768 U2SURPO15042 1029 aaKnown RBP17.36■□□□□ 0.37
MTHFD1-209ENST00000554768 PHKG2P15735 406 aa17.36■□□□□ 0.37
MTHFD1-209ENST00000554768 AMOTQ4VCS5 1084 aa17.36■□□□□ 0.37
MTHFD1-209ENST00000554768 IFNL2Q8IZJ0 200 aa17.36■□□□□ 0.37
MTHFD1-209ENST00000554768 PROM2Q8N271 834 aa17.36■□□□□ 0.37
MTHFD1-209ENST00000554768 SYTL4Q96C24 671 aaPredicted RBP17.35■□□□□ 0.37
MTHFD1-209ENST00000554768 SHANK3Q9BYB0 1731 aa17.34■□□□□ 0.37
MTHFD1-209ENST00000554768 SBF2Q86WG5 1849 aa17.33■□□□□ 0.37
MTHFD1-209ENST00000554768 NUDCQ9Y266 331 aa17.33■□□□□ 0.36
MTHFD1-209ENST00000554768 ZNF530Q6P9A1 599 aaPredicted RBP17.32■□□□□ 0.36
MTHFD1-209ENST00000554768 PKD1L3Q7Z443 1732 aa17.32■□□□□ 0.36
MTHFD1-209ENST00000554768 TXNRD1Q16881 649 aa17.31■□□□□ 0.36
MTHFD1-209ENST00000554768 PRKRIP1Q9H875 184 aaPredicted RBP17.31■□□□□ 0.36
MTHFD1-209ENST00000554768 NHSQ6T4R5 1651 aa17.3■□□□□ 0.36
MTHFD1-209ENST00000554768 MPRIPQ6WCQ1 1025 aa17.3■□□□□ 0.36
MTHFD1-209ENST00000554768 DCAF5Q96JK2 942 aa17.3■□□□□ 0.36
MTHFD1-209ENST00000554768 SRCAPQ6ZRS2 3230 aa17.3■□□□□ 0.36
MTHFD1-209ENST00000554768 MYBBP1AQ9BQG0 1328 aaKnown RBP17.29■□□□□ 0.36
MTHFD1-209ENST00000554768 HSP90AB1P08238 724 aaKnown RBP17.29■□□□□ 0.36
MTHFD1-209ENST00000554768 U2AF1L5P0DN76 240 aaPredicted RBP17.29■□□□□ 0.36
MTHFD1-209ENST00000554768 U2AF1Q01081 240 aaKnown RBP eCLIP17.29■□□□□ 0.36
MTHFD1-209ENST00000554768 MTHFSDQ2M296 383 aaKnown RBP17.29■□□□□ 0.36
MTHFD1-209ENST00000554768 RSPH6AQ9H0K4 717 aa17.29■□□□□ 0.36
MTHFD1-209ENST00000554768 FCHSD2O94868 740 aa17.28■□□□□ 0.36
MTHFD1-209ENST00000554768 C1orf141Q5JVX7 400 aa17.28■□□□□ 0.36
MTHFD1-209ENST00000554768 PIGBQ92521 554 aa17.28■□□□□ 0.36
MTHFD1-209ENST00000554768 ERVV-2B6SEH9 535 aa17.27■□□□□ 0.36
MTHFD1-209ENST00000554768 AKAP4Q5JQC9 854 aa17.27■□□□□ 0.36
MTHFD1-209ENST00000554768 PHACTR3Q96KR7 559 aa17.27■□□□□ 0.36
MTHFD1-209ENST00000554768 PRKAR2BP31323 418 aa17.26■□□□□ 0.35
MTHFD1-209ENST00000554768 NBPF14Q5TI25 921 aa17.26■□□□□ 0.35
MTHFD1-209ENST00000554768 R3HDM1Q15032 1099 aaKnown RBP17.25■□□□□ 0.35
MTHFD1-209ENST00000554768 LRRC4BQ9NT99 713 aa17.25■□□□□ 0.35
MTHFD1-209ENST00000554768 TMOD3Q9NYL9 352 aa17.25■□□□□ 0.35
MTHFD1-209ENST00000554768 KDM6AO15550 1401 aaPredicted RBP17.24■□□□□ 0.35
MTHFD1-209ENST00000554768 PSDA5PKW4 1024 aaPredicted RBP17.24■□□□□ 0.35
MTHFD1-209ENST00000554768 SLC27A3Q5K4L6 730 aa17.24■□□□□ 0.35
MTHFD1-209ENST00000554768 LGR6Q9HBX8 967 aa17.24■□□□□ 0.35
MTHFD1-209ENST00000554768 DOT1LQ8TEK3 1739 aa17.24■□□□□ 0.35
MTHFD1-209ENST00000554768 BTAF1O14981 1849 aa17.23■□□□□ 0.35
MTHFD1-209ENST00000554768 RGPD3A6NKT7 1758 aaPredicted RBP17.23■□□□□ 0.35
MTHFD1-209ENST00000554768 RGPD4Q7Z3J3 1758 aa17.23■□□□□ 0.35
MTHFD1-209ENST00000554768 KCNQ4P56696 695 aa17.22■□□□□ 0.35
MTHFD1-209ENST00000554768 CABP4P57796 275 aa17.22■□□□□ 0.35
MTHFD1-209ENST00000554768 NFATC2IPQ8NCF5 419 aa17.22■□□□□ 0.35
MTHFD1-209ENST00000554768 GAS2L2Q8NHY3 880 aa17.22■□□□□ 0.35
MTHFD1-209ENST00000554768 SMARCC1Q92922 1105 aaPredicted RBP17.22■□□□□ 0.35
MTHFD1-209ENST00000554768 ANO8Q9HCE9 1232 aaPredicted RBP17.22■□□□□ 0.35
MTHFD1-209ENST00000554768 ASAP1Q9ULH1 1129 aa17.22■□□□□ 0.35
MTHFD1-209ENST00000554768 RREB1Q92766 1687 aa17.22■□□□□ 0.35
MTHFD1-209ENST00000554768 TOGARAM1Q9Y4F4 1720 aa17.21■□□□□ 0.35
MTHFD1-209ENST00000554768 ATG3Q9NT62 314 aa17.21■□□□□ 0.35
MTHFD1-209ENST00000554768 KAT6BQ8WYB5 2073 aa17.2■□□□□ 0.34
MTHFD1-209ENST00000554768 PALLDQ8WX93 1383 aa17.2■□□□□ 0.34
MTHFD1-209ENST00000554768 RNMTO43148 476 aaKnown RBP17.2■□□□□ 0.34
MTHFD1-209ENST00000554768 PLEKHF1Q96S99 279 aa17.2■□□□□ 0.34
MTHFD1-209ENST00000554768 CCNL1Q9UK58 526 aaPredicted RBP17.2■□□□□ 0.34
MTHFD1-209ENST00000554768 GNAT3A8MTJ3 354 aa17.19■□□□□ 0.34
MTHFD1-209ENST00000554768 SLC15A2Q16348 729 aa17.19■□□□□ 0.34
MTHFD1-209ENST00000554768 IL17REQ8NFR9 667 aa17.19■□□□□ 0.34
MTHFD1-209ENST00000554768 STK32BQ9NY57 414 aa17.19■□□□□ 0.34
MTHFD1-209ENST00000554768 NUP188Q5SRE5 1749 aa17.18■□□□□ 0.34
MTHFD1-209ENST00000554768 SLC52A2Q9HAB3 445 aa17.18■□□□□ 0.34
MTHFD1-209ENST00000554768 MAP3K5Q99683 1374 aa17.17■□□□□ 0.34
MTHFD1-209ENST00000554768 AKT1S1Q96B36 256 aa17.17■□□□□ 0.34
MTHFD1-209ENST00000554768 PNNQ9H307 717 aaKnown RBP17.17■□□□□ 0.34
MTHFD1-209ENST00000554768 LOC102724428A0A0B4J2F2 783 aa17.16■□□□□ 0.34
MTHFD1-209ENST00000554768 SIK1P57059 783 aa17.16■□□□□ 0.34
MTHFD1-209ENST00000554768 ZNF827Q17R98 1081 aa17.16■□□□□ 0.34
MTHFD1-209ENST00000554768 ANP32CO43423 234 aa17.15■□□□□ 0.34
MTHFD1-209ENST00000554768 ITGB4P16144 1822 aa17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms