RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 CCER2I3L3R5 266 aa24.64■■□□□ 1.54
PSEN1-210ENST00000554131 U2AF1L5P0DN76 240 aaPredicted RBP24.64■■□□□ 1.54
PSEN1-210ENST00000554131 U2AF1Q01081 240 aaKnown RBP eCLIP24.64■■□□□ 1.54
PSEN1-210ENST00000554131 PNISRQ8TF01 805 aaKnown RBP24.64■■□□□ 1.54
PSEN1-210ENST00000554131 RAPGEF4Q8WZA2 1011 aa24.63■■□□□ 1.53
PSEN1-210ENST00000554131 TATP17735 454 aaPredicted RBP24.62■■□□□ 1.53
PSEN1-210ENST00000554131 FCHSD2O94868 740 aa24.61■■□□□ 1.53
PSEN1-210ENST00000554131 PLEKHF1Q96S99 279 aa24.6■■□□□ 1.53
PSEN1-210ENST00000554131 ADAMTS8Q9UP79 889 aa24.6■■□□□ 1.53
PSEN1-210ENST00000554131 DDB1Q16531 1140 aa24.59■■□□□ 1.53
PSEN1-210ENST00000554131 PRKAR2BP31323 418 aa24.58■■□□□ 1.53
PSEN1-210ENST00000554131 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.58■■□□□ 1.536e-6■□□□□ 8.9
PSEN1-210ENST00000554131 ZCRB1Q8TBF4 217 aaKnown RBP24.57■■□□□ 1.52
PSEN1-210ENST00000554131 EXOC5O00471 708 aa24.56■■□□□ 1.52
PSEN1-210ENST00000554131 WDR43Q15061 677 aaKnown RBP eCLIP24.56■■□□□ 1.52
PSEN1-210ENST00000554131 PHACTR3Q96KR7 559 aa24.56■■□□□ 1.52
PSEN1-210ENST00000554131 A0A0G2JS52 829 aa24.55■■□□□ 1.52
PSEN1-210ENST00000554131 MYT1Q01538 1121 aa24.55■■□□□ 1.52
PSEN1-210ENST00000554131 MARCH10Q8NA82 808 aaPredicted RBP24.55■■□□□ 1.52
PSEN1-210ENST00000554131 CYP27B1O15528 508 aa24.54■■□□□ 1.52
PSEN1-210ENST00000554131 KRT27Q7Z3Y8 459 aa24.53■■□□□ 1.52
PSEN1-210ENST00000554131 MTHFSDQ2M296 383 aaKnown RBP24.52■■□□□ 1.52
PSEN1-210ENST00000554131 AMOTQ4VCS5 1084 aa24.52■■□□□ 1.52
PSEN1-210ENST00000554131 PLEKHO1Q53GL0 409 aaPredicted RBP24.52■■□□□ 1.52
PSEN1-210ENST00000554131 SPG7Q9UQ90 795 aa24.52■■□□□ 1.52
PSEN1-210ENST00000554131 PCDH11XQ9BZA7 1347 aa24.52■■□□□ 1.52
PSEN1-210ENST00000554131 PCDH11YQ9BZA8 1340 aa24.52■■□□□ 1.52
PSEN1-210ENST00000554131 BCL9O00512 1426 aa24.51■■□□□ 1.51
PSEN1-210ENST00000554131 ADAMTS7Q9UKP4 1686 aa24.5■■□□□ 1.51
PSEN1-210ENST00000554131 TOGARAM1Q9Y4F4 1720 aa24.5■■□□□ 1.51
PSEN1-210ENST00000554131 PDE3BQ13370 1112 aa24.5■■□□□ 1.51
PSEN1-210ENST00000554131 ILDR2Q71H61 639 aa24.5■■□□□ 1.51
PSEN1-210ENST00000554131 DLG5Q8TDM6 1919 aa24.49■■□□□ 1.51
PSEN1-210ENST00000554131 EP400Q96L91 3159 aa24.49■■□□□ 1.51
PSEN1-210ENST00000554131 PHKG2P15735 406 aa24.49■■□□□ 1.51
PSEN1-210ENST00000554131 CCDC146Q8IYE0 955 aa24.49■■□□□ 1.51
PSEN1-210ENST00000554131 SBF2Q86WG5 1849 aa24.49■■□□□ 1.51
PSEN1-210ENST00000554131 FAM182BQ5T319 152 aa24.48■■□□□ 1.51
PSEN1-210ENST00000554131 DDX54Q8TDD1 881 aaKnown RBP24.48■■□□□ 1.51
PSEN1-210ENST00000554131 VIRMAQ69YN4 1812 aaKnown RBP24.47■■□□□ 1.51
PSEN1-210ENST00000554131 NKX1-1Q15270 411 aaPredicted RBP24.47■■□□□ 1.51
PSEN1-210ENST00000554131 ZNF530Q6P9A1 599 aaPredicted RBP24.47■■□□□ 1.51
PSEN1-210ENST00000554131 RUNDC1Q96C34 613 aa24.47■■□□□ 1.51
PSEN1-210ENST00000554131 PNNQ9H307 717 aaKnown RBP24.47■■□□□ 1.51
PSEN1-210ENST00000554131 DOT1LQ8TEK3 1739 aa24.47■■□□□ 1.51
PSEN1-210ENST00000554131 KDM6AO15550 1401 aaPredicted RBP24.45■■□□□ 1.51
PSEN1-210ENST00000554131 SCN11AQ9UI33 1791 aa24.45■■□□□ 1.5
PSEN1-210ENST00000554131 IFNL2Q8IZJ0 200 aa24.45■■□□□ 1.5
PSEN1-210ENST00000554131 FAM9BQ8IZU0 186 aa24.45■■□□□ 1.5
PSEN1-210ENST00000554131 GAS2L2Q8NHY3 880 aa24.44■■□□□ 1.5
PSEN1-210ENST00000554131 AKAP4Q5JQC9 854 aa24.43■■□□□ 1.5
PSEN1-210ENST00000554131 NHSQ6T4R5 1651 aa24.43■■□□□ 1.5
PSEN1-210ENST00000554131 MAPK8IP3Q9UPT6 1336 aa24.42■■□□□ 1.5
PSEN1-210ENST00000554131 NFE2L2Q16236 605 aa24.42■■□□□ 1.5
PSEN1-210ENST00000554131 MAP3K5Q99683 1374 aa24.42■■□□□ 1.5
PSEN1-210ENST00000554131 ITGB4P16144 1822 aa24.4■■□□□ 1.5
PSEN1-210ENST00000554131 TMPOP42166 694 aaKnown RBP24.4■■□□□ 1.5
PSEN1-210ENST00000554131 C1orf141Q5JVX7 400 aa24.39■■□□□ 1.49
PSEN1-210ENST00000554131 FAM196AQ6ZSG2 479 aa24.39■■□□□ 1.49
PSEN1-210ENST00000554131 MRC1P22897 1456 aa24.38■■□□□ 1.49
PSEN1-210ENST00000554131 TNS1Q9HBL0 1735 aaKnown RBP24.38■■□□□ 1.49
PSEN1-210ENST00000554131 APAF1O14727 1248 aa24.38■■□□□ 1.49
PSEN1-210ENST00000554131 SIPA1L3O60292 1781 aaPredicted RBP24.37■■□□□ 1.49
PSEN1-210ENST00000554131 GNAT3A8MTJ3 354 aa24.37■■□□□ 1.49
PSEN1-210ENST00000554131 NEFMP07197 916 aa24.37■■□□□ 1.49
PSEN1-210ENST00000554131 HSP90AB1P08238 724 aaKnown RBP24.37■■□□□ 1.49
PSEN1-210ENST00000554131 MPRIPQ6WCQ1 1025 aa24.37■■□□□ 1.49
PSEN1-210ENST00000554131 DCAF5Q96JK2 942 aa24.37■■□□□ 1.49
PSEN1-210ENST00000554131 LGR6Q9HBX8 967 aa24.37■■□□□ 1.49
PSEN1-210ENST00000554131 CEMIPQ8WUJ3 1361 aa24.37■■□□□ 1.49
PSEN1-210ENST00000554131 IL17REQ8NFR9 667 aa24.36■■□□□ 1.49
PSEN1-210ENST00000554131 RRP7AQ9Y3A4 280 aaKnown RBP24.36■■□□□ 1.49
PSEN1-210ENST00000554131 RNMTO43148 476 aaKnown RBP24.35■■□□□ 1.49
PSEN1-210ENST00000554131 PTF1AQ7RTS3 328 aa24.35■■□□□ 1.49
PSEN1-210ENST00000554131 KCNQ2O43526 872 aa24.34■■□□□ 1.49
PSEN1-210ENST00000554131 HTATSF1O43719 755 aaKnown RBP24.34■■□□□ 1.49
PSEN1-210ENST00000554131 ACSBG1Q96GR2 724 aa24.34■■□□□ 1.49
PSEN1-210ENST00000554131 TRIM35Q9UPQ4 493 aa24.34■■□□□ 1.49
PSEN1-210ENST00000554131 BTAF1O14981 1849 aa24.33■■□□□ 1.49
PSEN1-210ENST00000554131 RIPK4P57078 832 aa24.33■■□□□ 1.49
PSEN1-210ENST00000554131 PRIM1P49642 420 aaKnown RBP24.32■■□□□ 1.48
PSEN1-210ENST00000554131 ERVV-2B6SEH9 535 aa24.31■■□□□ 1.48
PSEN1-210ENST00000554131 DCTN1Q14203 1278 aa24.31■■□□□ 1.48
PSEN1-210ENST00000554131 MCM10Q7L590 875 aa24.31■■□□□ 1.48
PSEN1-210ENST00000554131 NCBP3Q53F19 620 aaKnown RBP24.3■■□□□ 1.48
PSEN1-210ENST00000554131 PAPPAQ13219 1627 aa24.3■■□□□ 1.48
PSEN1-210ENST00000554131 SENP3-EIF4A1A0A087X0R7 540 aa24.29■■□□□ 1.48
PSEN1-210ENST00000554131 TRIM37O94972 964 aa24.29■■□□□ 1.48
PSEN1-210ENST00000554131 NEUROD2Q15784 382 aa24.29■■□□□ 1.48
PSEN1-210ENST00000554131 BCL11BQ9C0K0 894 aaPredicted RBP24.29■■□□□ 1.48
PSEN1-210ENST00000554131 PIGBQ92521 554 aa24.27■■□□□ 1.48
PSEN1-210ENST00000554131 THUMPD2Q9BTF0 503 aaKnown RBP24.27■■□□□ 1.48
PSEN1-210ENST00000554131 SLC52A2Q9HAB3 445 aa24.27■■□□□ 1.48
PSEN1-210ENST00000554131 CCDC27Q2M243 656 aa24.26■■□□□ 1.47
PSEN1-210ENST00000554131 RTF1Q92541 710 aaKnown RBP24.26■■□□□ 1.47
PSEN1-210ENST00000554131 KAT6BQ8WYB5 2073 aa24.25■■□□□ 1.47
PSEN1-210ENST00000554131 LMOD3Q0VAK6 560 aa24.25■■□□□ 1.47
PSEN1-210ENST00000554131 NFATC2IPQ8NCF5 419 aa24.25■■□□□ 1.47
PSEN1-210ENST00000554131 CABP4P57796 275 aa24.24■■□□□ 1.47
PSEN1-210ENST00000554131 UPF1Q92900 1129 aaKnown RBP eCLIP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms