RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 SHANK3Q9BYB0 1731 aa28.31■■■□□ 2.12
HIF1A-206ENST00000553999 KIF24Q5T7B8 1368 aa28.3■■■□□ 2.12
HIF1A-206ENST00000553999 PLSCR1O15162 318 aa28.3■■■□□ 2.12
HIF1A-206ENST00000553999 TATP17735 454 aaPredicted RBP28.3■■■□□ 2.12
HIF1A-206ENST00000553999 PROM2Q8N271 834 aa28.3■■■□□ 2.12
HIF1A-206ENST00000553999 KNSTRNQ9Y448 316 aa28.3■■■□□ 2.12
HIF1A-206ENST00000553999 MORC1Q86VD1 984 aa28.29■■■□□ 2.12
HIF1A-206ENST00000553999 KAT6BQ8WYB5 2073 aa28.29■■■□□ 2.12
HIF1A-206ENST00000553999 DOT1LQ8TEK3 1739 aa28.29■■■□□ 2.12
HIF1A-206ENST00000553999 TXNRD1Q16881 649 aa28.28■■■□□ 2.12
HIF1A-206ENST00000553999 RGPD3A6NKT7 1758 aaPredicted RBP28.28■■■□□ 2.12
HIF1A-206ENST00000553999 RGPD4Q7Z3J3 1758 aa28.28■■■□□ 2.12
HIF1A-206ENST00000553999 BTAF1O14981 1849 aa28.27■■■□□ 2.12
HIF1A-206ENST00000553999 WASHC2AQ641Q2 1341 aa28.27■■■□□ 2.12
HIF1A-206ENST00000553999 PRIM1P49642 420 aaKnown RBP28.25■■■□□ 2.11
HIF1A-206ENST00000553999 EIF4A2Q14240 407 aaKnown RBP28.24■■■□□ 2.11
HIF1A-206ENST00000553999 EYA1Q99502 592 aa28.24■■■□□ 2.11
HIF1A-206ENST00000553999 NSD2O96028 1365 aa28.24■■■□□ 2.11
HIF1A-206ENST00000553999 LRP5O75197 1615 aa28.23■■■□□ 2.11
HIF1A-206ENST00000553999 CC2D1BQ5T0F9 858 aaKnown RBP28.21■■■□□ 2.11
HIF1A-206ENST00000553999 KCNQ4P56696 695 aa28.2■■■□□ 2.1
HIF1A-206ENST00000553999 SRCAPQ6ZRS2 3230 aa28.2■■■□□ 2.1
HIF1A-206ENST00000553999 PCDH11XQ9BZA7 1347 aa28.19■■■□□ 2.1
HIF1A-206ENST00000553999 PCDH11YQ9BZA8 1340 aa28.19■■■□□ 2.1
HIF1A-206ENST00000553999 PDGFDQ9GZP0 370 aaPredicted RBP28.19■■■□□ 2.1
HIF1A-206ENST00000553999 AMER1Q5JTC6 1135 aaPredicted RBP28.18■■■□□ 2.1
HIF1A-206ENST00000553999 STK32BQ9NY57 414 aa28.18■■■□□ 2.1
HIF1A-206ENST00000553999 CYP27B1O15528 508 aa28.16■■■□□ 2.1
HIF1A-206ENST00000553999 NCAPD2Q15021 1401 aa28.14■■■□□ 2.1
HIF1A-206ENST00000553999 LRRC4BQ9NT99 713 aa28.13■■■□□ 2.09
HIF1A-206ENST00000553999 PKD1L3Q7Z443 1732 aa28.12■■■□□ 2.09
HIF1A-206ENST00000553999 ZBTB7AO95365 584 aa28.12■■■□□ 2.09
HIF1A-206ENST00000553999 SLC15A2Q16348 729 aa28.11■■■□□ 2.09
HIF1A-206ENST00000553999 SPG7Q9UQ90 795 aa28.11■■■□□ 2.09
HIF1A-206ENST00000553999 TOGARAM1Q9Y4F4 1720 aa28.1■■■□□ 2.09
HIF1A-206ENST00000553999 ZNF827Q17R98 1081 aa28.1■■■□□ 2.09
HIF1A-206ENST00000553999 MPRIPQ6WCQ1 1025 aa28.1■■■□□ 2.09
HIF1A-206ENST00000553999 AEBP1Q8IUX7 1158 aa28.1■■■□□ 2.09
HIF1A-206ENST00000553999 PAPPAQ13219 1627 aa28.08■■■□□ 2.09
HIF1A-206ENST00000553999 PER1O15534 1290 aaPredicted RBP28.08■■■□□ 2.09
HIF1A-206ENST00000553999 IGSF1Q8N6C5 1336 aa28.08■■■□□ 2.09
HIF1A-206ENST00000553999 CASZ1Q86V15 1759 aa28.08■■■□□ 2.09
HIF1A-206ENST00000553999 SPON1Q9HCB6 807 aa28.06■■■□□ 2.08
HIF1A-206ENST00000553999 PPP1R1BQ9UD71 204 aaPredicted RBP28.06■■■□□ 2.08
HIF1A-206ENST00000553999 ATF5Q9Y2D1 282 aaPredicted RBP28.06■■■□□ 2.08
HIF1A-206ENST00000553999 MTHFSP49914 203 aa28.05■■■□□ 2.08
HIF1A-206ENST00000553999 CCNL1Q9UK58 526 aaPredicted RBP28.05■■■□□ 2.08
HIF1A-206ENST00000553999 SULT6B1Q6IMI4 303 aa28.02■■■□□ 2.08
HIF1A-206ENST00000553999 PHKG2P15735 406 aa28.01■■■□□ 2.07
HIF1A-206ENST00000553999 SLC27A3Q5K4L6 730 aa28.01■■■□□ 2.07
HIF1A-206ENST00000553999 LY75O60449 1722 aa28.01■■■□□ 2.07
HIF1A-206ENST00000553999 PALLDQ8WX93 1383 aa28■■■□□ 2.07
HIF1A-206ENST00000553999 IL13P35225 146 aa28■■■□□ 2.07
HIF1A-206ENST00000553999 IFNL2Q8IZJ0 200 aa28■■■□□ 2.07
HIF1A-206ENST00000553999 ITGB4P16144 1822 aa27.99■■■□□ 2.07
HIF1A-206ENST00000553999 ZNF530Q6P9A1 599 aaPredicted RBP27.99■■■□□ 2.07
HIF1A-206ENST00000553999 PIGBQ92521 554 aa27.98■■■□□ 2.07
HIF1A-206ENST00000553999 HMOX1P09601 288 aa27.97■■■□□ 2.07
HIF1A-206ENST00000553999 AKT1S1Q96B36 256 aa27.97■■■□□ 2.07
HIF1A-206ENST00000553999 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.97■■■□□ 2.078e-7■■□□□ 11.8
HIF1A-206ENST00000553999 TFCP2L1Q9NZI6 479 aa27.97■■■□□ 2.07
HIF1A-206ENST00000553999 PLEKHO1Q53GL0 409 aaPredicted RBP27.96■■■□□ 2.07
HIF1A-206ENST00000553999 TMOD3Q9NYL9 352 aa27.96■■■□□ 2.07
HIF1A-206ENST00000553999 NKX1-1Q15270 411 aaPredicted RBP27.95■■■□□ 2.06
HIF1A-206ENST00000553999 TUBGCP6Q96RT7 1819 aa27.93■■■□□ 2.06
HIF1A-206ENST00000553999 MSH5O43196 834 aa27.93■■■□□ 2.06
HIF1A-206ENST00000553999 PNPLA7Q6ZV29 1317 aa27.92■■■□□ 2.06
HIF1A-206ENST00000553999 ASAP1Q9ULH1 1129 aa27.91■■■□□ 2.06
HIF1A-206ENST00000553999 DIAPH1O60610 1272 aaKnown RBP27.9■■■□□ 2.06
HIF1A-206ENST00000553999 PTGER2P43116 358 aa27.9■■■□□ 2.06
HIF1A-206ENST00000553999 MTFR1LQ9H019 292 aa27.9■■■□□ 2.06
HIF1A-206ENST00000553999 C5P01031 1676 aa27.9■■■□□ 2.06
HIF1A-206ENST00000553999 NPC1L1Q9UHC9 1359 aa27.89■■■□□ 2.06
HIF1A-206ENST00000553999 U2SURPO15042 1029 aaKnown RBP27.89■■■□□ 2.06
HIF1A-206ENST00000553999 C1orf141Q5JVX7 400 aa27.89■■■□□ 2.06
HIF1A-206ENST00000553999 SMARCC1Q92922 1105 aaPredicted RBP27.89■■■□□ 2.06
HIF1A-206ENST00000553999 KDM6AO15550 1401 aaPredicted RBP27.89■■■□□ 2.06
HIF1A-206ENST00000553999 AMOTQ4VCS5 1084 aa27.87■■■□□ 2.05
HIF1A-206ENST00000553999 SMIM5Q71RC9 77 aa27.87■■■□□ 2.05
HIF1A-206ENST00000553999 KDRP35968 1356 aa27.86■■■□□ 2.05
HIF1A-206ENST00000553999 KLHL34Q8N239 644 aa27.86■■■□□ 2.05
HIF1A-206ENST00000553999 COL3A1P02461 1466 aaPredicted RBP27.85■■■□□ 2.05
HIF1A-206ENST00000553999 DCAF5Q96JK2 942 aa27.85■■■□□ 2.05
HIF1A-206ENST00000553999 HSP90AB1P08238 724 aaKnown RBP27.84■■■□□ 2.05
HIF1A-206ENST00000553999 CABP4P57796 275 aa27.84■■■□□ 2.05
HIF1A-206ENST00000553999 MSL1Q68DK7 614 aa27.84■■■□□ 2.05
HIF1A-206ENST00000553999 ATG3Q9NT62 314 aa27.84■■■□□ 2.05
HIF1A-206ENST00000553999 LOC102724428A0A0B4J2F2 783 aa27.83■■■□□ 2.05
HIF1A-206ENST00000553999 PHF14O94880 888 aa27.83■■■□□ 2.05
HIF1A-206ENST00000553999 SIK1P57059 783 aa27.83■■■□□ 2.05
HIF1A-206ENST00000553999 COL23A1Q86Y22 540 aaPredicted RBP27.82■■■□□ 2.04
HIF1A-206ENST00000553999 LINC00116Q8NCU8 138 aa27.82■■■□□ 2.04
HIF1A-206ENST00000553999 AK7Q96M32 723 aa27.82■■■□□ 2.04
HIF1A-206ENST00000553999 RBM42Q9BTD8 480 aaKnown RBP27.82■■■□□ 2.04
HIF1A-206ENST00000553999 C4BP0C0L5 1744 aa27.81■■■□□ 2.04
HIF1A-206ENST00000553999 QSER1Q2KHR3 1735 aa27.81■■■□□ 2.04
HIF1A-206ENST00000553999 TAF1LQ8IZX4 1826 aa27.81■■■□□ 2.04
HIF1A-206ENST00000553999 FHDC1Q9C0D6 1143 aaPredicted RBP27.81■■■□□ 2.04
HIF1A-206ENST00000553999 ATP6V1AP38606 617 aa27.8■■■□□ 2.04
HIF1A-206ENST00000553999 ITPK1Q13572 414 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms