RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 PPP2R1AP30153 589 aa12.58□□□□□ -0.4
CHD8-206ENST00000553870 CNGB1Q14028 1251 aaPredicted RBP12.58□□□□□ -0.4
CHD8-206ENST00000553870 BCL11BQ9C0K0 894 aaPredicted RBP12.58□□□□□ -0.4
CHD8-206ENST00000553870 SPG7Q9UQ90 795 aa12.58□□□□□ -0.4
CHD8-206ENST00000553870 LRRC37A3O60309 1634 aa12.58□□□□□ -0.4
CHD8-206ENST00000553870 TRIM37O94972 964 aa12.57□□□□□ -0.4
CHD8-206ENST00000553870 BAG6P46379 1132 aa12.57□□□□□ -0.4
CHD8-206ENST00000553870 DDX54Q8TDD1 881 aaKnown RBP12.57□□□□□ -0.4
CHD8-206ENST00000553870 PARD3Q8TEW0 1356 aa12.56□□□□□ -0.4
CHD8-206ENST00000553870 AMOTQ4VCS5 1084 aa12.56□□□□□ -0.4
CHD8-206ENST00000553870 NUDCQ9Y266 331 aa12.56□□□□□ -0.4
CHD8-206ENST00000553870 MEGF6O75095 1541 aa12.56□□□□□ -0.4
CHD8-206ENST00000553870 PCDH11XQ9BZA7 1347 aa12.56□□□□□ -0.4
CHD8-206ENST00000553870 PCDH11YQ9BZA8 1340 aa12.56□□□□□ -0.4
CHD8-206ENST00000553870 RGPD2P0DJD1 1756 aa12.56□□□□□ -0.4
CHD8-206ENST00000553870 PLEKHO1Q53GL0 409 aaPredicted RBP12.55□□□□□ -0.4
CHD8-206ENST00000553870 KDRP35968 1356 aa12.55□□□□□ -0.4
CHD8-206ENST00000553870 PLSCR1O15162 318 aa12.54□□□□□ -0.4
CHD8-206ENST00000553870 APBA3O96018 575 aa12.54□□□□□ -0.4
CHD8-206ENST00000553870 SULT6B1Q6IMI4 303 aa12.54□□□□□ -0.4
CHD8-206ENST00000553870 NKX1-1Q15270 411 aaPredicted RBP12.53□□□□□ -0.4
CHD8-206ENST00000553870 IFNL2Q8IZJ0 200 aa12.53□□□□□ -0.4
CHD8-206ENST00000553870 EP400Q96L91 3159 aa12.52□□□□□ -0.41
CHD8-206ENST00000553870 RGPD1P0DJD0 1748 aa12.52□□□□□ -0.41
CHD8-206ENST00000553870 HSP90AB1P08238 724 aaKnown RBP12.52□□□□□ -0.41
CHD8-206ENST00000553870 CYP27B1O15528 508 aa12.51□□□□□ -0.41
CHD8-206ENST00000553870 EN1Q05925 392 aaPredicted RBP12.51□□□□□ -0.41
CHD8-206ENST00000553870 DEFB132Q7Z7B7 95 aa12.51□□□□□ -0.41
CHD8-206ENST00000553870 AEBP1Q8IUX7 1158 aa12.51□□□□□ -0.41
CHD8-206ENST00000553870 CAMKK2Q96RR4 588 aa12.51□□□□□ -0.41
CHD8-206ENST00000553870 COL3A1P02461 1466 aaPredicted RBP12.51□□□□□ -0.41
CHD8-206ENST00000553870 U2SURPO15042 1029 aaKnown RBP12.5□□□□□ -0.41
CHD8-206ENST00000553870 KCNQ2O43526 872 aa12.5□□□□□ -0.41
CHD8-206ENST00000553870 FCHSD2O94868 740 aa12.5□□□□□ -0.41
CHD8-206ENST00000553870 PHKG2P15735 406 aa12.5□□□□□ -0.41
CHD8-206ENST00000553870 PRIM1P49642 420 aaKnown RBP12.5□□□□□ -0.41
CHD8-206ENST00000553870 PRKRIP1Q9H875 184 aaPredicted RBP12.5□□□□□ -0.41
CHD8-206ENST00000553870 MYBBP1AQ9BQG0 1328 aaKnown RBP12.5□□□□□ -0.41
CHD8-206ENST00000553870 HMGB2P26583 209 aaKnown RBP12.49□□□□□ -0.41
CHD8-206ENST00000553870 ACSBG1Q96GR2 724 aa12.49□□□□□ -0.41
CHD8-206ENST00000553870 SBF2Q86WG5 1849 aa12.48□□□□□ -0.41
CHD8-206ENST00000553870 HMOX1P09601 288 aa12.48□□□□□ -0.41
CHD8-206ENST00000553870 C1orf141Q5JVX7 400 aa12.48□□□□□ -0.41
CHD8-206ENST00000553870 DCAF5Q96JK2 942 aa12.48□□□□□ -0.41
CHD8-206ENST00000553870 PKD1L3Q7Z443 1732 aa12.48□□□□□ -0.41
CHD8-206ENST00000553870 ERVV-2B6SEH9 535 aa12.47□□□□□ -0.41
CHD8-206ENST00000553870 U2AF1L5P0DN76 240 aaPredicted RBP12.47□□□□□ -0.41
CHD8-206ENST00000553870 U2AF1Q01081 240 aaKnown RBP eCLIP12.47□□□□□ -0.41
CHD8-206ENST00000553870 EZH2Q15910 746 aaKnown RBP12.47□□□□□ -0.41
CHD8-206ENST00000553870 ZNF530Q6P9A1 599 aaPredicted RBP12.47□□□□□ -0.41
CHD8-206ENST00000553870 SYTL4Q96C24 671 aaPredicted RBP12.47□□□□□ -0.41
CHD8-206ENST00000553870 PNNQ9H307 717 aaKnown RBP12.47□□□□□ -0.41
CHD8-206ENST00000553870 TNS1Q9HBL0 1735 aaKnown RBP12.46□□□□□ -0.41
CHD8-206ENST00000553870 AKAP4Q5JQC9 854 aa12.46□□□□□ -0.41
CHD8-206ENST00000553870 PTF1AQ7RTS3 328 aa12.46□□□□□ -0.41
CHD8-206ENST00000553870 SHANK3Q9BYB0 1731 aa12.45□□□□□ -0.42
CHD8-206ENST00000553870 NHSQ6T4R5 1651 aa12.45□□□□□ -0.42
CHD8-206ENST00000553870 SLC27A3Q5K4L6 730 aa12.45□□□□□ -0.42
CHD8-206ENST00000553870 NBPF14Q5TI25 921 aa12.45□□□□□ -0.42
CHD8-206ENST00000553870 GAS2L2Q8NHY3 880 aa12.45□□□□□ -0.42
CHD8-206ENST00000553870 RSPH6AQ9H0K4 717 aa12.45□□□□□ -0.42
CHD8-206ENST00000553870 KAT6BQ8WYB5 2073 aa12.45□□□□□ -0.42
CHD8-206ENST00000553870 NEFMP07197 916 aa12.44□□□□□ -0.42
CHD8-206ENST00000553870 TXNRD1Q16881 649 aa12.44□□□□□ -0.42
CHD8-206ENST00000553870 MTHFSDQ2M296 383 aaKnown RBP12.44□□□□□ -0.42
CHD8-206ENST00000553870 MPRIPQ6WCQ1 1025 aa12.44□□□□□ -0.42
CHD8-206ENST00000553870 PROM2Q8N271 834 aa12.44□□□□□ -0.42
CHD8-206ENST00000553870 SMARCC1Q92922 1105 aaPredicted RBP12.44□□□□□ -0.42
CHD8-206ENST00000553870 ANP32CO43423 234 aa12.43□□□□□ -0.42
CHD8-206ENST00000553870 PRKAR2BP31323 418 aa12.43□□□□□ -0.42
CHD8-206ENST00000553870 TMOD3Q9NYL9 352 aa12.43□□□□□ -0.42
CHD8-206ENST00000553870 RGPD3A6NKT7 1758 aaPredicted RBP12.43□□□□□ -0.42
CHD8-206ENST00000553870 RGPD4Q7Z3J3 1758 aa12.43□□□□□ -0.42
CHD8-206ENST00000553870 CABP4P57796 275 aa12.42□□□□□ -0.42
CHD8-206ENST00000553870 PIGBQ92521 554 aa12.42□□□□□ -0.42
CHD8-206ENST00000553870 GNAT3A8MTJ3 354 aa12.41□□□□□ -0.42
CHD8-206ENST00000553870 HTATSF1O43719 755 aaKnown RBP12.41□□□□□ -0.42
CHD8-206ENST00000553870 PHACTR3Q96KR7 559 aa12.41□□□□□ -0.42
CHD8-206ENST00000553870 RNMTO43148 476 aaKnown RBP12.4□□□□□ -0.42
CHD8-206ENST00000553870 BTAF1O14981 1849 aa12.39□□□□□ -0.43
CHD8-206ENST00000553870 WDR43Q15061 677 aaKnown RBP eCLIP12.39□□□□□ -0.437e-11■■□□□ 11.5
CHD8-206ENST00000553870 NFATC2IPQ8NCF5 419 aa12.39□□□□□ -0.43
CHD8-206ENST00000553870 PLEKHF1Q96S99 279 aa12.39□□□□□ -0.43
CHD8-206ENST00000553870 DOT1LQ8TEK3 1739 aa12.39□□□□□ -0.43
CHD8-206ENST00000553870 KDM6AO15550 1401 aaPredicted RBP12.38□□□□□ -0.43
CHD8-206ENST00000553870 SLC52A2Q9HAB3 445 aa12.38□□□□□ -0.43
CHD8-206ENST00000553870 LGR6Q9HBX8 967 aa12.38□□□□□ -0.43
CHD8-206ENST00000553870 MAP3K5Q99683 1374 aa12.38□□□□□ -0.43
CHD8-206ENST00000553870 RREB1Q92766 1687 aa12.38□□□□□ -0.43
CHD8-206ENST00000553870 RTF1Q92541 710 aaKnown RBP12.37□□□□□ -0.43
CHD8-206ENST00000553870 ATG3Q9NT62 314 aa12.37□□□□□ -0.43
CHD8-206ENST00000553870 LRRC4BQ9NT99 713 aa12.37□□□□□ -0.43
CHD8-206ENST00000553870 STK32BQ9NY57 414 aa12.37□□□□□ -0.43
CHD8-206ENST00000553870 CCNL1Q9UK58 526 aaPredicted RBP12.37□□□□□ -0.43
CHD8-206ENST00000553870 PALLDQ8WX93 1383 aa12.37□□□□□ -0.43
CHD8-206ENST00000553870 MAPK8IP3Q9UPT6 1336 aa12.37□□□□□ -0.43
CHD8-206ENST00000553870 SLC15A2Q16348 729 aa12.36□□□□□ -0.43
CHD8-206ENST00000553870 IL17REQ8NFR9 667 aa12.36□□□□□ -0.43
CHD8-206ENST00000553870 ASAP1Q9ULH1 1129 aa12.36□□□□□ -0.43
CHD8-206ENST00000553870 ITGB4P16144 1822 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms