RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 OVOS2A0A0G2JMS6 1433 aa25.68■■□□□ 1.7
PSEN1-207ENST00000553599 MEGF6O75095 1541 aa25.68■■□□□ 1.7
PSEN1-207ENST00000553599 PRKAR2BP31323 418 aa25.67■■□□□ 1.7
PSEN1-207ENST00000553599 FAM98CQ17RN3 349 aaKnown RBP25.67■■□□□ 1.7
PSEN1-207ENST00000553599 AMOTQ4VCS5 1084 aa25.67■■□□□ 1.7
PSEN1-207ENST00000553599 THSD7AQ9UPZ6 1657 aa25.66■■□□□ 1.7
PSEN1-207ENST00000553599 POTEAQ6S8J7 498 aa25.65■■□□□ 1.7
PSEN1-207ENST00000553599 PLEKHO1Q53GL0 409 aaPredicted RBP25.64■■□□□ 1.7
PSEN1-207ENST00000553599 FAM9BQ8IZU0 186 aa25.64■■□□□ 1.7
PSEN1-207ENST00000553599 PLEKHF1Q96S99 279 aa25.64■■□□□ 1.7
PSEN1-207ENST00000553599 SPG7Q9UQ90 795 aa25.64■■□□□ 1.7
PSEN1-207ENST00000553599 RUNDC1Q96C34 613 aa25.63■■□□□ 1.69
PSEN1-207ENST00000553599 PKD1L3Q7Z443 1732 aa25.63■■□□□ 1.69
PSEN1-207ENST00000553599 MAPK8IP3Q9UPT6 1336 aa25.63■■□□□ 1.69
PSEN1-207ENST00000553599 EXOC5O00471 708 aa25.62■■□□□ 1.69
PSEN1-207ENST00000553599 ZCRB1Q8TBF4 217 aaKnown RBP25.62■■□□□ 1.69
PSEN1-207ENST00000553599 DDB1Q16531 1140 aa25.61■■□□□ 1.69
PSEN1-207ENST00000553599 TNS2Q63HR2 1409 aa25.61■■□□□ 1.69
PSEN1-207ENST00000553599 SEPT12Q8IYM1 358 aa25.59■■□□□ 1.69
PSEN1-207ENST00000553599 GAS2L2Q8NHY3 880 aa25.59■■□□□ 1.69
PSEN1-207ENST00000553599 PCDH11XQ9BZA7 1347 aa25.59■■□□□ 1.69
PSEN1-207ENST00000553599 PCDH11YQ9BZA8 1340 aa25.59■■□□□ 1.69
PSEN1-207ENST00000553599 LRRC37A3O60309 1634 aa25.59■■□□□ 1.69
PSEN1-207ENST00000553599 A0A0G2JS52 829 aa25.58■■□□□ 1.69
PSEN1-207ENST00000553599 MYT1Q01538 1121 aa25.58■■□□□ 1.69
PSEN1-207ENST00000553599 PHACTR3Q96KR7 559 aa25.58■■□□□ 1.69
PSEN1-207ENST00000553599 MTHFSDQ2M296 383 aaKnown RBP25.55■■□□□ 1.68
PSEN1-207ENST00000553599 CCDC146Q8IYE0 955 aa25.55■■□□□ 1.68
PSEN1-207ENST00000553599 PDE3BQ13370 1112 aa25.54■■□□□ 1.68
PSEN1-207ENST00000553599 ZNF530Q6P9A1 599 aaPredicted RBP25.54■■□□□ 1.68
PSEN1-207ENST00000553599 IFNL2Q8IZJ0 200 aa25.54■■□□□ 1.68
PSEN1-207ENST00000553599 NFE2L2Q16236 605 aa25.53■■□□□ 1.68
PSEN1-207ENST00000553599 NCBP3Q53F19 620 aaKnown RBP25.53■■□□□ 1.68
PSEN1-207ENST00000553599 RGS12O14924 1447 aa25.53■■□□□ 1.68
PSEN1-207ENST00000553599 SHANK3Q9BYB0 1731 aa25.52■■□□□ 1.68
PSEN1-207ENST00000553599 HSP90AB1P08238 724 aaKnown RBP25.52■■□□□ 1.68
PSEN1-207ENST00000553599 AKAP4Q5JQC9 854 aa25.52■■□□□ 1.68
PSEN1-207ENST00000553599 C1orf141Q5JVX7 400 aa25.52■■□□□ 1.68
PSEN1-207ENST00000553599 NGEFQ8N5V2 710 aa25.52■■□□□ 1.68
PSEN1-207ENST00000553599 PHKG2P15735 406 aa25.51■■□□□ 1.67
PSEN1-207ENST00000553599 CYP27B1O15528 508 aa25.5■■□□□ 1.67
PSEN1-207ENST00000553599 HTATSF1O43719 755 aaKnown RBP25.5■■□□□ 1.67
PSEN1-207ENST00000553599 DDX54Q8TDD1 881 aaKnown RBP25.5■■□□□ 1.67
PSEN1-207ENST00000553599 APAF1O14727 1248 aa25.49■■□□□ 1.67
PSEN1-207ENST00000553599 TMPOP42166 694 aaKnown RBP25.49■■□□□ 1.67
PSEN1-207ENST00000553599 NKX1-1Q15270 411 aaPredicted RBP25.49■■□□□ 1.67
PSEN1-207ENST00000553599 MAP3K5Q99683 1374 aa25.48■■□□□ 1.67
PSEN1-207ENST00000553599 GNAT3A8MTJ3 354 aa25.48■■□□□ 1.67
PSEN1-207ENST00000553599 LMOD3Q0VAK6 560 aa25.48■■□□□ 1.67
PSEN1-207ENST00000553599 KRT27Q7Z3Y8 459 aa25.48■■□□□ 1.67
PSEN1-207ENST00000553599 MARCH10Q8NA82 808 aaPredicted RBP25.48■■□□□ 1.67
PSEN1-207ENST00000553599 BCL9O00512 1426 aa25.47■■□□□ 1.67
PSEN1-207ENST00000553599 DCAF5Q96JK2 942 aa25.46■■□□□ 1.67
PSEN1-207ENST00000553599 BRWD3Q6RI45 1802 aa25.46■■□□□ 1.67
PSEN1-207ENST00000553599 RIPK4P57078 832 aa25.45■■□□□ 1.66
PSEN1-207ENST00000553599 RTF1Q92541 710 aaKnown RBP25.44■■□□□ 1.66
PSEN1-207ENST00000553599 CCDC27Q2M243 656 aa25.43■■□□□ 1.66
PSEN1-207ENST00000553599 DLG5Q8TDM6 1919 aa25.43■■□□□ 1.66
PSEN1-207ENST00000553599 ADAMTS7Q9UKP4 1686 aa25.42■■□□□ 1.66
PSEN1-207ENST00000553599 FAM196AQ6ZSG2 479 aa25.41■■□□□ 1.66
PSEN1-207ENST00000553599 NEUROD2Q15784 382 aa25.4■■□□□ 1.66
PSEN1-207ENST00000553599 RRP7AQ9Y3A4 280 aaKnown RBP25.4■■□□□ 1.66
PSEN1-207ENST00000553599 ERVV-2B6SEH9 535 aa25.39■■□□□ 1.66
PSEN1-207ENST00000553599 MPRIPQ6WCQ1 1025 aa25.39■■□□□ 1.66
PSEN1-207ENST00000553599 CEMIPQ8WUJ3 1361 aa25.39■■□□□ 1.65
PSEN1-207ENST00000553599 KDM6AO15550 1401 aaPredicted RBP25.38■■□□□ 1.65
PSEN1-207ENST00000553599 RNMTO43148 476 aaKnown RBP25.38■■□□□ 1.65
PSEN1-207ENST00000553599 SCN11AQ9UI33 1791 aa25.38■■□□□ 1.65
PSEN1-207ENST00000553599 TRIM35Q9UPQ4 493 aa25.37■■□□□ 1.65
PSEN1-207ENST00000553599 CALD1Q05682 793 aaKnown RBP25.36■■□□□ 1.65
PSEN1-207ENST00000553599 IL17REQ8NFR9 667 aa25.36■■□□□ 1.65
PSEN1-207ENST00000553599 LGR6Q9HBX8 967 aa25.34■■□□□ 1.65
PSEN1-207ENST00000553599 MRC1P22897 1456 aa25.34■■□□□ 1.65
PSEN1-207ENST00000553599 VIRMAQ69YN4 1812 aaKnown RBP25.33■■□□□ 1.65
PSEN1-207ENST00000553599 MCM10Q7L590 875 aa25.33■■□□□ 1.65
PSEN1-207ENST00000553599 WWC1Q8IX03 1113 aa25.33■■□□□ 1.65
PSEN1-207ENST00000553599 DOT1LQ8TEK3 1739 aa25.32■■□□□ 1.64
PSEN1-207ENST00000553599 CABP4P57796 275 aa25.32■■□□□ 1.64
PSEN1-207ENST00000553599 HNRNPUQ00839 825 aaKnown RBP eCLIP25.32■■□□□ 1.64
PSEN1-207ENST00000553599 TEFQ10587 303 aa25.32■■□□□ 1.64
PSEN1-207ENST00000553599 TOGARAM1Q9Y4F4 1720 aa25.32■■□□□ 1.64
PSEN1-207ENST00000553599 FAM182BQ5T319 152 aa25.31■■□□□ 1.64
PSEN1-207ENST00000553599 SLC52A2Q9HAB3 445 aa25.31■■□□□ 1.64
PSEN1-207ENST00000553599 NHSQ6T4R5 1651 aa25.3■■□□□ 1.64
PSEN1-207ENST00000553599 DCTN1Q14203 1278 aa25.3■■□□□ 1.64
PSEN1-207ENST00000553599 WDR63Q8IWG1 891 aa25.3■■□□□ 1.64
PSEN1-207ENST00000553599 TMOD3Q9NYL9 352 aa25.3■■□□□ 1.64
PSEN1-207ENST00000553599 SBF2Q86WG5 1849 aa25.29■■□□□ 1.64
PSEN1-207ENST00000553599 PRIM1P49642 420 aaKnown RBP25.29■■□□□ 1.64
PSEN1-207ENST00000553599 BABAM1Q9NWV8 329 aa25.29■■□□□ 1.64
PSEN1-207ENST00000553599 BCL11BQ9C0K0 894 aaPredicted RBP25.28■■□□□ 1.64
PSEN1-207ENST00000553599 SALL2Q9Y467 1007 aaPredicted RBP25.28■■□□□ 1.64
PSEN1-207ENST00000553599 IL16Q14005 1332 aa25.28■■□□□ 1.64
PSEN1-207ENST00000553599 ZNF521Q96K83 1311 aa25.28■■□□□ 1.64
PSEN1-207ENST00000553599 TAF7Q15545 349 aaPredicted RBP25.27■■□□□ 1.64
PSEN1-207ENST00000553599 NFATC2IPQ8NCF5 419 aa25.27■■□□□ 1.64
PSEN1-207ENST00000553599 ITGB4P16144 1822 aa25.27■■□□□ 1.64
PSEN1-207ENST00000553599 SIPA1L3O60292 1781 aaPredicted RBP25.26■■□□□ 1.63
PSEN1-207ENST00000553599 SYTL4Q96C24 671 aaPredicted RBP25.26■■□□□ 1.63
PSEN1-207ENST00000553599 ACSBG1Q96GR2 724 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms