RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 TRIM35Q9UPQ4 493 aa19.8■□□□□ 0.76
ABCD4-218ENST00000553486 CT47B1P0C2W7 299 aaPredicted RBP19.79■□□□□ 0.76
ABCD4-218ENST00000553486 IL13P35225 146 aa19.79■□□□□ 0.76
ABCD4-218ENST00000553486 PDE3AQ14432 1141 aa19.79■□□□□ 0.76
ABCD4-218ENST00000553486 CPDO75976 1380 aa19.79■□□□□ 0.76
ABCD4-218ENST00000553486 RARSP54136 660 aaKnown RBP19.79■□□□□ 0.76
ABCD4-218ENST00000553486 PRKAR2BP31323 418 aa19.78■□□□□ 0.76
ABCD4-218ENST00000553486 TTC21AQ8NDW8 1320 aa19.78■□□□□ 0.76
ABCD4-218ENST00000553486 SSH2Q76I76 1423 aa19.78■□□□□ 0.76
ABCD4-218ENST00000553486 OVOS2A0A0J9YW53 1432 aa19.77■□□□□ 0.76
ABCD4-218ENST00000553486 OVOS2Q6IE36 1432 aa19.77■□□□□ 0.76
ABCD4-218ENST00000553486 CANXP27824 592 aaKnown RBP19.77■□□□□ 0.76
ABCD4-218ENST00000553486 RRS1Q15050 365 aaKnown RBP19.76■□□□□ 0.75
ABCD4-218ENST00000553486 USP35Q9P2H5 1018 aa19.76■□□□□ 0.75
ABCD4-218ENST00000553486 GCP02774 474 aa19.76■□□□□ 0.75
ABCD4-218ENST00000553486 EVA1CP58658 441 aa19.76■□□□□ 0.75
ABCD4-218ENST00000553486 CAMTA1Q9Y6Y1 1673 aa19.76■□□□□ 0.75
ABCD4-218ENST00000553486 TCERG1O14776 1098 aaKnown RBP19.74■□□□□ 0.75
ABCD4-218ENST00000553486 BARGINQ6ZT62 677 aa19.74■□□□□ 0.75
ABCD4-218ENST00000553486 DISP2A7MBM2 1401 aa19.74■□□□□ 0.75
ABCD4-218ENST00000553486 FANCIQ9NVI1 1328 aa19.74■□□□□ 0.75
ABCD4-218ENST00000553486 EN1Q05925 392 aaPredicted RBP19.74■□□□□ 0.75
ABCD4-218ENST00000553486 NFE2L2Q16236 605 aa19.74■□□□□ 0.75
ABCD4-218ENST00000553486 LARP1Q6PKG0 1096 aaKnown RBP19.74■□□□□ 0.75
ABCD4-218ENST00000553486 LMO7Q8WWI1 1683 aa19.73■□□□□ 0.75
ABCD4-218ENST00000553486 USP31Q70CQ4 1352 aa19.73■□□□□ 0.75
ABCD4-218ENST00000553486 HMOX1P09601 288 aa19.73■□□□□ 0.75
ABCD4-218ENST00000553486 RGPD1P0DJD0 1748 aa19.73■□□□□ 0.75
ABCD4-218ENST00000553486 FAM196AQ6ZSG2 479 aa19.72■□□□□ 0.75
ABCD4-218ENST00000553486 CENPQQ7L2Z9 268 aaPredicted RBP19.72■□□□□ 0.75
ABCD4-218ENST00000553486 CALD1Q05682 793 aaKnown RBP19.71■□□□□ 0.75
ABCD4-218ENST00000553486 FRAT1Q92837 279 aaPredicted RBP19.71■□□□□ 0.75
ABCD4-218ENST00000553486 NLRP6P59044 892 aa19.7■□□□□ 0.74
ABCD4-218ENST00000553486 TSR2Q969E8 191 aaKnown RBP19.7■□□□□ 0.74
ABCD4-218ENST00000553486 COL5A2P05997 1499 aaPredicted RBP19.7■□□□□ 0.74
ABCD4-218ENST00000553486 KDM2BQ8NHM5 1336 aa19.7■□□□□ 0.74
ABCD4-218ENST00000553486 PSDA5PKW4 1024 aaPredicted RBP19.69■□□□□ 0.74
ABCD4-218ENST00000553486 TRIM37O94972 964 aa19.69■□□□□ 0.74
ABCD4-218ENST00000553486 EXOSC9Q06265 439 aaKnown RBP19.69■□□□□ 0.74
ABCD4-218ENST00000553486 AAMPQ13685 434 aa19.69■□□□□ 0.74
ABCD4-218ENST00000553486 PHACTR3Q96KR7 559 aa19.69■□□□□ 0.74
ABCD4-218ENST00000553486 THRAP3Q9Y2W1 955 aaKnown RBP19.69■□□□□ 0.74
ABCD4-218ENST00000553486 TNS1Q9HBL0 1735 aaKnown RBP19.68■□□□□ 0.74
ABCD4-218ENST00000553486 MS4A1P11836 297 aa19.68■□□□□ 0.74
ABCD4-218ENST00000553486 LMOD3Q0VAK6 560 aa19.68■□□□□ 0.74
ABCD4-218ENST00000553486 SLIT3O75094 1523 aa19.68■□□□□ 0.74
ABCD4-218ENST00000553486 DLG5Q8TDM6 1919 aa19.68■□□□□ 0.74
ABCD4-218ENST00000553486 EIF4A2Q14240 407 aaKnown RBP19.67■□□□□ 0.74
ABCD4-218ENST00000553486 PANK1Q8TE04 598 aa19.67■□□□□ 0.74
ABCD4-218ENST00000553486 EZH2Q15910 746 aaKnown RBP19.66■□□□□ 0.74
ABCD4-218ENST00000553486 PEAK1Q9H792 1746 aa19.66■□□□□ 0.74
ABCD4-218ENST00000553486 LRP5O75197 1615 aa19.66■□□□□ 0.74
ABCD4-218ENST00000553486 CRB1P82279 1406 aa19.65■□□□□ 0.74
ABCD4-218ENST00000553486 CAMKK2Q96RR4 588 aa19.65■□□□□ 0.74
ABCD4-218ENST00000553486 COG6Q9Y2V7 657 aa19.65■□□□□ 0.74
ABCD4-218ENST00000553486 PIK3C2AO00443 1686 aa19.65■□□□□ 0.74
ABCD4-218ENST00000553486 ZBTB7CA1YPR0 619 aa19.65■□□□□ 0.74
ABCD4-218ENST00000553486 BCL2L13Q9BXK5 485 aa19.65■□□□□ 0.74
ABCD4-218ENST00000553486 ZKSCAN2Q63HK3 967 aa19.64■□□□□ 0.73
ABCD4-218ENST00000553486 APBA3O96018 575 aa19.63■□□□□ 0.73
ABCD4-218ENST00000553486 R3HDM1Q15032 1099 aaKnown RBP19.63■□□□□ 0.73
ABCD4-218ENST00000553486 CLUAP1Q96AJ1 413 aa19.63■□□□□ 0.73
ABCD4-218ENST00000553486 USP54Q70EL1 1684 aa19.63■□□□□ 0.73
ABCD4-218ENST00000553486 GNAI1P63096 354 aa19.62■□□□□ 0.73
ABCD4-218ENST00000553486 SMC4Q9NTJ3 1288 aa19.62■□□□□ 0.73
ABCD4-218ENST00000553486 ZNF428Q96B54 188 aa19.62■□□□□ 0.73
ABCD4-218ENST00000553486 IFT57Q9NWB7 429 aa19.62■□□□□ 0.73
ABCD4-218ENST00000553486 HSP90AB2PQ58FF8 381 aa19.61■□□□□ 0.73
ABCD4-218ENST00000553486 SULT6B1Q6IMI4 303 aa19.61■□□□□ 0.73
ABCD4-218ENST00000553486 MAP3K19Q56UN5 1328 aa19.61■□□□□ 0.73
ABCD4-218ENST00000553486 FLT4P35916 1363 aa19.61■□□□□ 0.73
ABCD4-218ENST00000553486 ALDH1L2Q3SY69 923 aa19.6■□□□□ 0.73
ABCD4-218ENST00000553486 LAS1LQ9Y4W2 734 aaKnown RBP19.6■□□□□ 0.73
ABCD4-218ENST00000553486 SOX12O15370 315 aa19.6■□□□□ 0.73
ABCD4-218ENST00000553486 KCNH5Q8NCM2 988 aa19.6■□□□□ 0.73
ABCD4-218ENST00000553486 SSH1Q8WYL5 1049 aa19.6■□□□□ 0.73
ABCD4-218ENST00000553486 PARP4Q9UKK3 1724 aaKnown RBP19.6■□□□□ 0.73
ABCD4-218ENST00000553486 AXIN2Q9Y2T1 843 aa19.6■□□□□ 0.73
ABCD4-218ENST00000553486 TOM1L2Q6ZVM7 507 aa19.59■□□□□ 0.73
ABCD4-218ENST00000553486 ARHGEF25Q86VW2 580 aa19.59■□□□□ 0.73
ABCD4-218ENST00000553486 DZIP1LQ8IYY4 767 aaKnown RBP19.59■□□□□ 0.73
ABCD4-218ENST00000553486 WDR17Q8IZU2 1322 aa19.58■□□□□ 0.73
ABCD4-218ENST00000553486 AMPHP49418 695 aa19.58■□□□□ 0.73
ABCD4-218ENST00000553486 FTSJ3Q8IY81 847 aaKnown RBP19.58■□□□□ 0.73
ABCD4-218ENST00000553486 KIF24Q5T7B8 1368 aa19.58■□□□□ 0.72
ABCD4-218ENST00000553486 KIF16BQ96L93 1317 aa19.58■□□□□ 0.72
ABCD4-218ENST00000553486 ZNF853P0CG23 659 aa19.58■□□□□ 0.72
ABCD4-218ENST00000553486 RLBP1P12271 317 aa19.58■□□□□ 0.72
ABCD4-218ENST00000553486 COL18A1P39060 1754 aa19.57■□□□□ 0.72
ABCD4-218ENST00000553486 IPO8O15397 1037 aaKnown RBP19.57■□□□□ 0.72
ABCD4-218ENST00000553486 MVPQ14764 893 aaKnown RBP19.57■□□□□ 0.72
ABCD4-218ENST00000553486 AEBP1Q8IUX7 1158 aa19.57■□□□□ 0.72
ABCD4-218ENST00000553486 CFAP44Q96MT7 982 aa19.57■□□□□ 0.72
ABCD4-218ENST00000553486 OVOS2A0A0G2JMS6 1433 aa19.57■□□□□ 0.72
ABCD4-218ENST00000553486 PDE4AP27815 886 aa19.56■□□□□ 0.72
ABCD4-218ENST00000553486 THUMPD2Q9BTF0 503 aaKnown RBP19.56■□□□□ 0.72
ABCD4-218ENST00000553486 TNNQ9UQP3 1299 aa19.56■□□□□ 0.72
ABCD4-218ENST00000553486 DDB1Q16531 1140 aa19.55■□□□□ 0.72
ABCD4-218ENST00000553486 BRPF1P55201 1214 aaPredicted RBP19.55■□□□□ 0.72
ABCD4-218ENST00000553486 ATF7IPQ6VMQ6 1270 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms