RNA–Protein interactions for RNA: ENST00000553272.6

PCNX1-203, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 553 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-203ENST00000553272 COL13A1Q5TAT6 717 aaPredicted RBP11.44□□□□□ -0.58
PCNX1-203ENST00000553272 NME9Q86XW9 330 aa11.44□□□□□ -0.58
PCNX1-203ENST00000553272 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.44□□□□□ -0.58
PCNX1-203ENST00000553272 L3MBTL2Q969R5 705 aa11.44□□□□□ -0.58
PCNX1-203ENST00000553272 TFCP2L1Q9NZI6 479 aa11.44□□□□□ -0.58
PCNX1-203ENST00000553272 SBNO2Q9Y2G9 1366 aa11.43□□□□□ -0.58
PCNX1-203ENST00000553272 DDX54Q8TDD1 881 aaKnown RBP11.43□□□□□ -0.58
PCNX1-203ENST00000553272 CD163L1Q9NR16 1453 aa11.43□□□□□ -0.58
PCNX1-203ENST00000553272 N4BP2Q86UW6 1770 aaPredicted RBP11.42□□□□□ -0.58
PCNX1-203ENST00000553272 PRIM1P49642 420 aaKnown RBP11.42□□□□□ -0.58
PCNX1-203ENST00000553272 PCNTO95613 3336 aa11.42□□□□□ -0.58
PCNX1-203ENST00000553272 NSD2O96028 1365 aa11.41□□□□□ -0.58
PCNX1-203ENST00000553272 ANKRD36BQ8N2N9 1353 aa11.41□□□□□ -0.58
PCNX1-203ENST00000553272 TOGARAM1Q9Y4F4 1720 aa11.41□□□□□ -0.58
PCNX1-203ENST00000553272 COL23A1Q86Y22 540 aaPredicted RBP11.41□□□□□ -0.58
PCNX1-203ENST00000553272 KIF3CO14782 793 aa11.4□□□□□ -0.58
PCNX1-203ENST00000553272 HTRA3P83110 453 aa11.4□□□□□ -0.58
PCNX1-203ENST00000553272 PIAS4Q8N2W9 510 aaPredicted RBP11.4□□□□□ -0.58
PCNX1-203ENST00000553272 IP6K1Q92551 441 aa11.4□□□□□ -0.58
PCNX1-203ENST00000553272 ROCK2O75116 1388 aaKnown RBP11.4□□□□□ -0.59
PCNX1-203ENST00000553272 UBR3Q6ZT12 1888 aa11.39□□□□□ -0.59
PCNX1-203ENST00000553272 PKD1L3Q7Z443 1732 aa11.39□□□□□ -0.59
PCNX1-203ENST00000553272 SYTL4Q96C24 671 aaPredicted RBP11.39□□□□□ -0.59
PCNX1-203ENST00000553272 FAM208AQ9UK61 1670 aaKnown RBP11.39□□□□□ -0.59
PCNX1-203ENST00000553272 CICQ96RK0 1608 aaPredicted RBP11.38□□□□□ -0.59
PCNX1-203ENST00000553272 APLP1P51693 650 aa11.38□□□□□ -0.59
PCNX1-203ENST00000553272 TNS4Q8IZW8 715 aa11.38□□□□□ -0.59
PCNX1-203ENST00000553272 SLC12A5Q9H2X9 1139 aa11.38□□□□□ -0.59
PCNX1-203ENST00000553272 CCNL1Q9UK58 526 aaPredicted RBP11.38□□□□□ -0.59
PCNX1-203ENST00000553272 KIAA1551Q9HCM1 1747 aa11.38□□□□□ -0.59
PCNX1-203ENST00000553272 EDC4Q6P2E9 1401 aaKnown RBP11.37□□□□□ -0.59
PCNX1-203ENST00000553272 ZCRB1Q8TBF4 217 aaKnown RBP11.37□□□□□ -0.59
PCNX1-203ENST00000553272 LTV1Q96GA3 475 aaPredicted RBP11.37□□□□□ -0.59
PCNX1-203ENST00000553272 CD2APQ9Y5K6 639 aa11.37□□□□□ -0.59
PCNX1-203ENST00000553272 HDGFL2Q7Z4V5 671 aaPredicted RBP11.36□□□□□ -0.59
PCNX1-203ENST00000553272 DNAJC5GQ8N7S2 189 aa11.36□□□□□ -0.59
PCNX1-203ENST00000553272 TMC1Q8TDI8 760 aa11.36□□□□□ -0.59
PCNX1-203ENST00000553272 BRCA1P38398 1863 aaKnown RBP11.36□□□□□ -0.59
PCNX1-203ENST00000553272 SIN3AQ96ST3 1273 aa11.35□□□□□ -0.59
PCNX1-203ENST00000553272 ITGB4P16144 1822 aa11.35□□□□□ -0.59
PCNX1-203ENST00000553272 MEGF6O75095 1541 aa11.35□□□□□ -0.59
PCNX1-203ENST00000553272 IGSF1Q8N6C5 1336 aa11.35□□□□□ -0.59
PCNX1-203ENST00000553272 A0A1W2PP64 1363 aa11.34□□□□□ -0.59
PCNX1-203ENST00000553272 USP47Q96K76 1375 aa11.34□□□□□ -0.59
PCNX1-203ENST00000553272 HOXC9P31274 260 aa11.34□□□□□ -0.59
PCNX1-203ENST00000553272 PRELPP51888 382 aa11.34□□□□□ -0.59
PCNX1-203ENST00000553272 TERF2IPQ9NYB0 399 aa11.34□□□□□ -0.59
PCNX1-203ENST00000553272 KIF13BQ9NQT8 1826 aa11.34□□□□□ -0.59
PCNX1-203ENST00000553272 C4BP0C0L5 1744 aa11.34□□□□□ -0.59
PCNX1-203ENST00000553272 MAP3K19Q56UN5 1328 aa11.34□□□□□ -0.59
PCNX1-203ENST00000553272 FBLN1P23142 703 aa11.33□□□□□ -0.6
PCNX1-203ENST00000553272 FLAD1Q8NFF5 587 aa11.33□□□□□ -0.6
PCNX1-203ENST00000553272 PUS7Q96PZ0 661 aaKnown RBP11.33□□□□□ -0.6
PCNX1-203ENST00000553272 NMRK2Q9NPI5 230 aa11.32□□□□□ -0.6
PCNX1-203ENST00000553272 TNRC6CQ9HCJ0 1690 aaKnown RBP11.31□□□□□ -0.6
PCNX1-203ENST00000553272 AMPHP49418 695 aa11.31□□□□□ -0.6
PCNX1-203ENST00000553272 NBPF6Q5VWK0 638 aa11.31□□□□□ -0.6
PCNX1-203ENST00000553272 NBPF4Q96M43 638 aa11.31□□□□□ -0.6
PCNX1-203ENST00000553272 CGNL1Q0VF96 1302 aa11.31□□□□□ -0.6
PCNX1-203ENST00000553272 ARFGEF1Q9Y6D6 1849 aa11.3□□□□□ -0.6
PCNX1-203ENST00000553272 HMGB2P26583 209 aaKnown RBP11.3□□□□□ -0.6
PCNX1-203ENST00000553272 NEUROD1Q13562 356 aa11.3□□□□□ -0.6
PCNX1-203ENST00000553272 AMIGO3Q86WK7 504 aa11.3□□□□□ -0.6
PCNX1-203ENST00000553272 KLRG1Q96E93 195 aa11.3□□□□□ -0.6
PCNX1-203ENST00000553272 COG3Q96JB2 828 aa11.3□□□□□ -0.6
PCNX1-203ENST00000553272 SBF1O95248 1867 aa11.29□□□□□ -0.6
PCNX1-203ENST00000553272 SMIM5Q71RC9 77 aa11.29□□□□□ -0.6
PCNX1-203ENST00000553272 CARD11Q9BXL7 1154 aa11.29□□□□□ -0.6
PCNX1-203ENST00000553272 PALLDQ8WX93 1383 aa11.28□□□□□ -0.6
PCNX1-203ENST00000553272 CCDC88AQ3V6T2 1871 aa11.28□□□□□ -0.6
PCNX1-203ENST00000553272 TOMM70O94826 608 aa11.28□□□□□ -0.6
PCNX1-203ENST00000553272 USHBP1Q8N6Y0 703 aa11.28□□□□□ -0.6
PCNX1-203ENST00000553272 RTL1A6NKG5 1358 aa11.28□□□□□ -0.6
PCNX1-203ENST00000553272 KCPQ6ZWJ8 1503 aa11.27□□□□□ -0.61
PCNX1-203ENST00000553272 PHF14O94880 888 aa11.27□□□□□ -0.61
PCNX1-203ENST00000553272 MPRIPQ6WCQ1 1025 aa11.27□□□□□ -0.61
PCNX1-203ENST00000553272 RAPGEF4Q8WZA2 1011 aa11.27□□□□□ -0.61
PCNX1-203ENST00000553272 MAP2P11137 1827 aaKnown RBP11.26□□□□□ -0.61
PCNX1-203ENST00000553272 CYP27B1O15528 508 aa11.26□□□□□ -0.61
PCNX1-203ENST00000553272 SLC34A2O95436 690 aa11.26□□□□□ -0.61
PCNX1-203ENST00000553272 TATP17735 454 aaPredicted RBP11.26□□□□□ -0.61
PCNX1-203ENST00000553272 RRS1Q15050 365 aaKnown RBP11.26□□□□□ -0.61
PCNX1-203ENST00000553272 JMYQ8N9B5 988 aa11.26□□□□□ -0.61
PCNX1-203ENST00000553272 AK7Q96M32 723 aa11.26□□□□□ -0.61
PCNX1-203ENST00000553272 PCDH11XQ9BZA7 1347 aa11.26□□□□□ -0.61
PCNX1-203ENST00000553272 PCDH11YQ9BZA8 1340 aa11.26□□□□□ -0.61
PCNX1-203ENST00000553272 PXDNLA1KZ92 1463 aa11.25□□□□□ -0.61
PCNX1-203ENST00000553272 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.25□□□□□ -0.61
PCNX1-203ENST00000553272 SMARCC1Q92922 1105 aaPredicted RBP11.25□□□□□ -0.61
PCNX1-203ENST00000553272 TESK2Q96S53 571 aa11.25□□□□□ -0.61
PCNX1-203ENST00000553272 TIAM2Q8IVF5 1701 aa11.25□□□□□ -0.61
PCNX1-203ENST00000553272 FYB1O15117 783 aa11.24□□□□□ -0.61
PCNX1-203ENST00000553272 HSPA1AP0DMV8 641 aaKnown RBP11.24□□□□□ -0.61
PCNX1-203ENST00000553272 HSPA1BP0DMV9 641 aaKnown RBP11.24□□□□□ -0.61
PCNX1-203ENST00000553272 SSFA2P28290 1259 aa11.24□□□□□ -0.61
PCNX1-203ENST00000553272 HSP90AB2PQ58FF8 381 aa11.24□□□□□ -0.61
PCNX1-203ENST00000553272 PIGBQ92521 554 aa11.24□□□□□ -0.61
PCNX1-203ENST00000553272 NSD3Q9BZ95 1437 aa11.24□□□□□ -0.61
PCNX1-203ENST00000553272 ADRA2BP18089 450 aa11.23□□□□□ -0.61
PCNX1-203ENST00000553272 NKX1-1Q15270 411 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms