RNA–Protein interactions for RNA: ENST00000552742.5

PFDN5-218, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-218ENST00000552742 KCNQ2O43526 872 aa13.32□□□□□ -0.28
PFDN5-218ENST00000552742 ACSBG1Q96GR2 724 aa13.32□□□□□ -0.28
PFDN5-218ENST00000552742 BCL11BQ9C0K0 894 aaPredicted RBP13.32□□□□□ -0.28
PFDN5-218ENST00000552742 TNS1Q9HBL0 1735 aaKnown RBP13.32□□□□□ -0.28
PFDN5-218ENST00000552742 IL13P35225 146 aa13.31□□□□□ -0.28
PFDN5-218ENST00000552742 CAMKK2Q96RR4 588 aa13.31□□□□□ -0.28
PFDN5-218ENST00000552742 EZH2Q15910 746 aaKnown RBP13.3□□□□□ -0.28
PFDN5-218ENST00000552742 SRCAPQ6ZRS2 3230 aa13.3□□□□□ -0.28
PFDN5-218ENST00000552742 BCL9O00512 1426 aa13.3□□□□□ -0.28
PFDN5-218ENST00000552742 NCAPD2Q15021 1401 aa13.3□□□□□ -0.28
PFDN5-218ENST00000552742 AEBP1Q8IUX7 1158 aa13.29□□□□□ -0.28
PFDN5-218ENST00000552742 SHANK3Q9BYB0 1731 aa13.29□□□□□ -0.28
PFDN5-218ENST00000552742 IGSF1Q8N6C5 1336 aa13.29□□□□□ -0.28
PFDN5-218ENST00000552742 CYP27B1O15528 508 aa13.28□□□□□ -0.28
PFDN5-218ENST00000552742 PPP2R1AP30153 589 aa13.28□□□□□ -0.28
PFDN5-218ENST00000552742 DIAPH1O60610 1272 aaKnown RBP13.27□□□□□ -0.29
PFDN5-218ENST00000552742 PRIM1P49642 420 aaKnown RBP13.27□□□□□ -0.29
PFDN5-218ENST00000552742 SULT6B1Q6IMI4 303 aa13.27□□□□□ -0.29
PFDN5-218ENST00000552742 SPG7Q9UQ90 795 aa13.27□□□□□ -0.29
PFDN5-218ENST00000552742 PLSCR1O15162 318 aa13.26□□□□□ -0.29
PFDN5-218ENST00000552742 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.26□□□□□ -0.29
PFDN5-218ENST00000552742 PCDH11XQ9BZA7 1347 aa13.25□□□□□ -0.29
PFDN5-218ENST00000552742 PCDH11YQ9BZA8 1340 aa13.25□□□□□ -0.29
PFDN5-218ENST00000552742 PROM2Q8N271 834 aa13.25□□□□□ -0.29
PFDN5-218ENST00000552742 SYTL4Q96C24 671 aaPredicted RBP13.25□□□□□ -0.29
PFDN5-218ENST00000552742 PKD1L3Q7Z443 1732 aa13.25□□□□□ -0.29
PFDN5-218ENST00000552742 HMOX1P09601 288 aa13.24□□□□□ -0.29
PFDN5-218ENST00000552742 PLEKHO1Q53GL0 409 aaPredicted RBP13.24□□□□□ -0.29
PFDN5-218ENST00000552742 BTAF1O14981 1849 aa13.24□□□□□ -0.29
PFDN5-218ENST00000552742 NHSQ6T4R5 1651 aa13.24□□□□□ -0.29
PFDN5-218ENST00000552742 ZNF316A6NFI3 1004 aaPredicted RBP13.23□□□□□ -0.29
PFDN5-218ENST00000552742 U2SURPO15042 1029 aaKnown RBP13.23□□□□□ -0.29
PFDN5-218ENST00000552742 CFAP53Q96M91 514 aa13.23□□□□□ -0.29
PFDN5-218ENST00000552742 COL3A1P02461 1466 aaPredicted RBP13.23□□□□□ -0.29
PFDN5-218ENST00000552742 PHKG2P15735 406 aa13.22□□□□□ -0.29
PFDN5-218ENST00000552742 NKX1-1Q15270 411 aaPredicted RBP13.22□□□□□ -0.29
PFDN5-218ENST00000552742 IFNL2Q8IZJ0 200 aa13.22□□□□□ -0.29
PFDN5-218ENST00000552742 DOT1LQ8TEK3 1739 aa13.22□□□□□ -0.29
PFDN5-218ENST00000552742 KDRP35968 1356 aa13.21□□□□□ -0.29
PFDN5-218ENST00000552742 PARD3Q8TEW0 1356 aa13.21□□□□□ -0.29
PFDN5-218ENST00000552742 ITGB4P16144 1822 aa13.21□□□□□ -0.29
PFDN5-218ENST00000552742 PSDA5PKW4 1024 aaPredicted RBP13.21□□□□□ -0.29
PFDN5-218ENST00000552742 TXNRD1Q16881 649 aa13.21□□□□□ -0.29
PFDN5-218ENST00000552742 AMOTQ4VCS5 1084 aa13.21□□□□□ -0.29
PFDN5-218ENST00000552742 ZNF530Q6P9A1 599 aaPredicted RBP13.21□□□□□ -0.29
PFDN5-218ENST00000552742 MPRIPQ6WCQ1 1025 aa13.21□□□□□ -0.29
PFDN5-218ENST00000552742 RALBP1Q15311 655 aa13.2□□□□□ -0.3
PFDN5-218ENST00000552742 RREB1Q92766 1687 aa13.2□□□□□ -0.3
PFDN5-218ENST00000552742 R3HDM1Q15032 1099 aaKnown RBP13.19□□□□□ -0.3
PFDN5-218ENST00000552742 NUDCQ9Y266 331 aa13.19□□□□□ -0.3
PFDN5-218ENST00000552742 NUP188Q5SRE5 1749 aa13.19□□□□□ -0.3
PFDN5-218ENST00000552742 RGPD3A6NKT7 1758 aaPredicted RBP13.18□□□□□ -0.3
PFDN5-218ENST00000552742 RGPD4Q7Z3J3 1758 aa13.18□□□□□ -0.3
PFDN5-218ENST00000552742 KCNQ4P56696 695 aa13.18□□□□□ -0.3
PFDN5-218ENST00000552742 NBPF14Q5TI25 921 aa13.18□□□□□ -0.3
PFDN5-218ENST00000552742 PIGBQ92521 554 aa13.18□□□□□ -0.3
PFDN5-218ENST00000552742 TOGARAM1Q9Y4F4 1720 aa13.18□□□□□ -0.3
PFDN5-218ENST00000552742 U2AF1L5P0DN76 240 aaPredicted RBP13.17□□□□□ -0.3
PFDN5-218ENST00000552742 U2AF1Q01081 240 aaKnown RBP eCLIP13.17□□□□□ -0.3
PFDN5-218ENST00000552742 MTHFSDQ2M296 383 aaKnown RBP13.17□□□□□ -0.3
PFDN5-218ENST00000552742 C1orf141Q5JVX7 400 aa13.17□□□□□ -0.3
PFDN5-218ENST00000552742 LRRC4BQ9NT99 713 aa13.17□□□□□ -0.3
PFDN5-218ENST00000552742 PLEKHG2Q9H7P9 1386 aa13.17□□□□□ -0.3
PFDN5-218ENST00000552742 ERVV-2B6SEH9 535 aa13.16□□□□□ -0.3
PFDN5-218ENST00000552742 HSP90AB1P08238 724 aaKnown RBP13.16□□□□□ -0.3
PFDN5-218ENST00000552742 DCAF5Q96JK2 942 aa13.16□□□□□ -0.3
PFDN5-218ENST00000552742 PHACTR3Q96KR7 559 aa13.16□□□□□ -0.3
PFDN5-218ENST00000552742 RSPH6AQ9H0K4 717 aa13.15□□□□□ -0.3
PFDN5-218ENST00000552742 LGR6Q9HBX8 967 aa13.15□□□□□ -0.3
PFDN5-218ENST00000552742 ANO8Q9HCE9 1232 aaPredicted RBP13.15□□□□□ -0.3
PFDN5-218ENST00000552742 TMOD3Q9NYL9 352 aa13.15□□□□□ -0.3
PFDN5-218ENST00000552742 PRKAR2BP31323 418 aa13.14□□□□□ -0.31
PFDN5-218ENST00000552742 AKAP4Q5JQC9 854 aa13.14□□□□□ -0.31
PFDN5-218ENST00000552742 PRKRIP1Q9H875 184 aaPredicted RBP13.14□□□□□ -0.31
PFDN5-218ENST00000552742 ASAP1Q9ULH1 1129 aa13.14□□□□□ -0.31
PFDN5-218ENST00000552742 MYBBP1AQ9BQG0 1328 aaKnown RBP13.13□□□□□ -0.31
PFDN5-218ENST00000552742 FCHSD2O94868 740 aa13.13□□□□□ -0.31
PFDN5-218ENST00000552742 CABP4P57796 275 aa13.13□□□□□ -0.31
PFDN5-218ENST00000552742 SLC27A3Q5K4L6 730 aa13.13□□□□□ -0.31
PFDN5-218ENST00000552742 NFATC2IPQ8NCF5 419 aa13.13□□□□□ -0.31
PFDN5-218ENST00000552742 VIRMAQ69YN4 1812 aaKnown RBP13.13□□□□□ -0.31
PFDN5-218ENST00000552742 LY75O60449 1722 aa13.13□□□□□ -0.31
PFDN5-218ENST00000552742 KDM6AO15550 1401 aaPredicted RBP13.13□□□□□ -0.31
PFDN5-218ENST00000552742 SCN11AQ9UI33 1791 aa13.12□□□□□ -0.31
PFDN5-218ENST00000552742 SLC15A2Q16348 729 aa13.12□□□□□ -0.31
PFDN5-218ENST00000552742 SMARCC1Q92922 1105 aaPredicted RBP13.12□□□□□ -0.31
PFDN5-218ENST00000552742 ATG3Q9NT62 314 aa13.12□□□□□ -0.31
PFDN5-218ENST00000552742 STK32BQ9NY57 414 aa13.12□□□□□ -0.31
PFDN5-218ENST00000552742 CCNL1Q9UK58 526 aaPredicted RBP13.12□□□□□ -0.31
PFDN5-218ENST00000552742 PALLDQ8WX93 1383 aa13.11□□□□□ -0.31
PFDN5-218ENST00000552742 RNMTO43148 476 aaKnown RBP13.11□□□□□ -0.31
PFDN5-218ENST00000552742 PDGFDQ9GZP0 370 aaPredicted RBP13.11□□□□□ -0.31
PFDN5-218ENST00000552742 ZNF827Q17R98 1081 aa13.1□□□□□ -0.31
PFDN5-218ENST00000552742 GAS2L2Q8NHY3 880 aa13.1□□□□□ -0.31
PFDN5-218ENST00000552742 GNAT3A8MTJ3 354 aa13.09□□□□□ -0.31
PFDN5-218ENST00000552742 IL17REQ8NFR9 667 aa13.09□□□□□ -0.31
PFDN5-218ENST00000552742 AKT1S1Q96B36 256 aa13.09□□□□□ -0.31
PFDN5-218ENST00000552742 LOC102724428A0A0B4J2F2 783 aa13.08□□□□□ -0.32
PFDN5-218ENST00000552742 SIK1P57059 783 aa13.08□□□□□ -0.32
PFDN5-218ENST00000552742 RBM42Q9BTD8 480 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms