RNA–Protein interactions for RNA: ENST00000552329.1

CHPT1-209, Transcript of choline phosphotransferase 1, humanhuman

TSL 4

Gene CHPT1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-209ENST00000552329 SOBPA7XYQ1 873 aa12.41□□□□□ -0.42
CHPT1-209ENST00000552329 STAU1O95793 577 aaKnown RBP12.41□□□□□ -0.42
CHPT1-209ENST00000552329 MYCP01106 439 aaPredicted RBP12.41□□□□□ -0.42
CHPT1-209ENST00000552329 INSM2Q96T92 566 aaPredicted RBP12.41□□□□□ -0.42
CHPT1-209ENST00000552329 OSBPL3Q9H4L5 887 aa12.41□□□□□ -0.42
CHPT1-209ENST00000552329 KDF1Q8NAX2 398 aaPredicted RBP12.4□□□□□ -0.42
CHPT1-209ENST00000552329 RAB6BQ9NRW1 208 aa12.4□□□□□ -0.42
CHPT1-209ENST00000552329 TIMELESSQ9UNS1 1208 aa12.4□□□□□ -0.42
CHPT1-209ENST00000552329 ATP5J2-PTCD1G3V325 749 aa12.39□□□□□ -0.43
CHPT1-209ENST00000552329 USP17L5A8MUK1 530 aa12.38□□□□□ -0.43
CHPT1-209ENST00000552329 MEN1O00255 615 aa12.38□□□□□ -0.43
CHPT1-209ENST00000552329 USP4Q13107 963 aa12.38□□□□□ -0.43
CHPT1-209ENST00000552329 NCOA4Q13772 614 aa12.38□□□□□ -0.43
CHPT1-209ENST00000552329 CCDC125Q86Z20 511 aa12.38□□□□□ -0.43
CHPT1-209ENST00000552329 TFIP11Q9UBB9 837 aaKnown RBP12.38□□□□□ -0.43
CHPT1-209ENST00000552329 CHIC2Q9UKJ5 165 aa12.38□□□□□ -0.43
CHPT1-209ENST00000552329 FIGNL2A6NMB9 653 aa12.37□□□□□ -0.43
CHPT1-209ENST00000552329 PTGIRP43119 386 aa12.37□□□□□ -0.43
CHPT1-209ENST00000552329 CTSOP43234 321 aaPredicted RBP12.37□□□□□ -0.43
CHPT1-209ENST00000552329 TRIM47Q96LD4 638 aa12.37□□□□□ -0.43
CHPT1-209ENST00000552329 SENP2Q9HC62 589 aa12.37□□□□□ -0.43
CHPT1-209ENST00000552329 ARHGEF10LQ9HCE6 1279 aa12.37□□□□□ -0.43
CHPT1-209ENST00000552329 POLMQ9NP87 494 aaPredicted RBP12.37□□□□□ -0.43
CHPT1-209ENST00000552329 MAP7D1Q3KQU3 841 aa12.36□□□□□ -0.43
CHPT1-209ENST00000552329 USP17L3A6NCW0 530 aa12.35□□□□□ -0.43
CHPT1-209ENST00000552329 USP17L4A6NCW7 530 aa12.35□□□□□ -0.43
CHPT1-209ENST00000552329 USP17L2Q6R6M4 530 aa12.35□□□□□ -0.43
CHPT1-209ENST00000552329 USP17L1Q7RTZ2 530 aa12.35□□□□□ -0.43
CHPT1-209ENST00000552329 CYP2U1Q7Z449 544 aa12.35□□□□□ -0.43
CHPT1-209ENST00000552329 A0A1W2PRU2 124 aa12.34□□□□□ -0.43
CHPT1-209ENST00000552329 PALM3A6NDB9 673 aaPredicted RBP12.34□□□□□ -0.43
CHPT1-209ENST00000552329 SPINT1O43278 529 aa12.34□□□□□ -0.43
CHPT1-209ENST00000552329 ATP9BO43861 1147 aa12.34□□□□□ -0.43
CHPT1-209ENST00000552329 EML3Q32P44 896 aa12.34□□□□□ -0.43
CHPT1-209ENST00000552329 MAN1A2O60476 641 aa12.33□□□□□ -0.44
CHPT1-209ENST00000552329 NFATC2IPQ8NCF5 419 aa12.33□□□□□ -0.44
CHPT1-209ENST00000552329 TRIM52Q96A61 297 aa12.33□□□□□ -0.44
CHPT1-209ENST00000552329 PPP1R12CQ9BZL4 782 aa12.33□□□□□ -0.44
CHPT1-209ENST00000552329 TTLL8A6PVC2 850 aa12.32□□□□□ -0.44
CHPT1-209ENST00000552329 KIFC2Q96AC6 838 aa12.32□□□□□ -0.44
CHPT1-209ENST00000552329 SUPT5HO00267 1087 aaKnown RBP12.31□□□□□ -0.44
CHPT1-209ENST00000552329 RFX1P22670 979 aa12.31□□□□□ -0.44
CHPT1-209ENST00000552329 LMOD1P29536 600 aaPredicted RBP12.31□□□□□ -0.44
CHPT1-209ENST00000552329 DNMT3LQ9UJW3 386 aa12.31□□□□□ -0.44
CHPT1-209ENST00000552329 NOD1Q9Y239 953 aa12.31□□□□□ -0.44
CHPT1-209ENST00000552329 SOS2Q07890 1332 aaPredicted RBP12.31□□□□□ -0.44
CHPT1-209ENST00000552329 PSME1Q06323 249 aa12.3□□□□□ -0.44
CHPT1-209ENST00000552329 SIRT1Q96EB6 747 aa12.3□□□□□ -0.44
CHPT1-209ENST00000552329 MAFBQ9Y5Q3 323 aaPredicted RBP12.3□□□□□ -0.44
CHPT1-209ENST00000552329 GTF2IP78347 998 aa12.29□□□□□ -0.44
CHPT1-209ENST00000552329 NLRP3Q96P20 1036 aa12.29□□□□□ -0.44
CHPT1-209ENST00000552329 CDCA8Q53HL2 280 aa12.28□□□□□ -0.44
CHPT1-209ENST00000552329 C1orf115Q9H7X2 142 aa12.28□□□□□ -0.44
CHPT1-209ENST00000552329 ETNK1Q9HBU6 452 aa12.28□□□□□ -0.44
CHPT1-209ENST00000552329 MKRN1Q9UHC7 482 aaKnown RBP12.28□□□□□ -0.44
CHPT1-209ENST00000552329 IL2RAP01589 272 aa12.27□□□□□ -0.45
CHPT1-209ENST00000552329 FOXD4L5Q5VV16 416 aaPredicted RBP12.27□□□□□ -0.45
CHPT1-209ENST00000552329 PCDHGA11Q9Y5H2 935 aa12.27□□□□□ -0.45
CHPT1-209ENST00000552329 GNRH1P01148 92 aa12.26□□□□□ -0.45
CHPT1-209ENST00000552329 PRICKLE2Q7Z3G6 844 aa12.26□□□□□ -0.45
CHPT1-209ENST00000552329 RNF217Q8TC41 542 aa12.26□□□□□ -0.45
CHPT1-209ENST00000552329 CNKSR1Q969H4 720 aa12.26□□□□□ -0.45
CHPT1-209ENST00000552329 SERTAD1Q9UHV2 236 aa12.26□□□□□ -0.45
CHPT1-209ENST00000552329 CLN3Q13286 438 aa12.25□□□□□ -0.45
CHPT1-209ENST00000552329 CFAP70Q5T0N1 1121 aa12.25□□□□□ -0.45
CHPT1-209ENST00000552329 PLEKHM2Q8IWE5 1019 aa12.25□□□□□ -0.45
CHPT1-209ENST00000552329 ZNF594Q96JF6 807 aaPredicted RBP12.25□□□□□ -0.45
CHPT1-209ENST00000552329 RHOQP17081 205 aa12.24□□□□□ -0.45
CHPT1-209ENST00000552329 GDF10P55107 478 aa12.24□□□□□ -0.45
CHPT1-209ENST00000552329 CLDN10P78369 228 aa12.24□□□□□ -0.45
CHPT1-209ENST00000552329 SLC27A3Q5K4L6 730 aa12.24□□□□□ -0.45
CHPT1-209ENST00000552329 CCDC97Q96F63 343 aaPredicted RBP12.24□□□□□ -0.45
CHPT1-209ENST00000552329 KIAA1024Q9UPX6 916 aa12.24□□□□□ -0.45
CHPT1-209ENST00000552329 VEGFBP49765 207 aa12.23□□□□□ -0.45
CHPT1-209ENST00000552329 SCNN1DP51172 638 aa12.23□□□□□ -0.45
CHPT1-209ENST00000552329 OGFOD1Q8N543 542 aa12.23□□□□□ -0.45
CHPT1-209ENST00000552329 LZTS3O60299 673 aaPredicted RBP12.22□□□□□ -0.45
CHPT1-209ENST00000552329 CCDC82Q8N4S0 544 aa12.22□□□□□ -0.45
CHPT1-209ENST00000552329 RASA1P20936 1047 aa12.21□□□□□ -0.45
CHPT1-209ENST00000552329 CENPCQ03188 943 aa12.21□□□□□ -0.45
CHPT1-209ENST00000552329 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.21□□□□□ -0.45
CHPT1-209ENST00000552329 TPCN2Q8NHX9 752 aa12.21□□□□□ -0.45
CHPT1-209ENST00000552329 ESYT1Q9BSJ8 1104 aa12.21□□□□□ -0.45
CHPT1-209ENST00000552329 TMEM229AB2RXF0 380 aa12.2□□□□□ -0.46
CHPT1-209ENST00000552329 RNF144AP50876 292 aaPredicted RBP12.2□□□□□ -0.46
CHPT1-209ENST00000552329 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.2□□□□□ -0.46
CHPT1-209ENST00000552329 ESCO1Q5FWF5 840 aa12.2□□□□□ -0.46
CHPT1-209ENST00000552329 TRIM50Q86XT4 487 aa12.2□□□□□ -0.46
CHPT1-209ENST00000552329 DNAAF2Q9NVR5 837 aaKnown RBP12.2□□□□□ -0.46
CHPT1-209ENST00000552329 INHAP05111 366 aa12.19□□□□□ -0.46
CHPT1-209ENST00000552329 TLR1Q15399 786 aa12.19□□□□□ -0.46
CHPT1-209ENST00000552329 LYSMD3Q7Z3D4 306 aa12.19□□□□□ -0.46
CHPT1-209ENST00000552329 XAGE2Q96GT9 111 aa12.19□□□□□ -0.46
CHPT1-209ENST00000552329 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.18□□□□□ -0.46
CHPT1-209ENST00000552329 ZBTB7BO15156 539 aaPredicted RBP12.18□□□□□ -0.46
CHPT1-209ENST00000552329 POU4F2Q12837 409 aa12.18□□□□□ -0.46
CHPT1-209ENST00000552329 CCDC102BQ68D86 513 aa12.18□□□□□ -0.46
CHPT1-209ENST00000552329 ERICH6Q7L0X2 663 aa12.18□□□□□ -0.46
CHPT1-209ENST00000552329 ZNF775Q96BV0 537 aaPredicted RBP12.18□□□□□ -0.46
CHPT1-209ENST00000552329 ARID3AQ99856 593 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms