RNA–Protein interactions for RNA: ENST00000552296.6

PCBP2-222, Transcript of poly(rC) binding protein 2, human

APPRIS ALT1 TSL 5 BASIC

Gene PCBP2, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCBP2-222	ENST00000552296	CARD11	Q9BXL7	1154 aa		12.7	□□□□□ -0.38
PCBP2-222	ENST00000552296	CEP350	Q5VT06	3117 aa		12.69	□□□□□ -0.38
PCBP2-222	ENST00000552296	TESK2	Q96S53	571 aa		12.69	□□□□□ -0.38
PCBP2-222	ENST00000552296	MEGF6	O75095	1541 aa		12.69	□□□□□ -0.38
PCBP2-222	ENST00000552296	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	12.68	□□□□□ -0.38
PCBP2-222	ENST00000552296	ARX	Q96QS3	562 aa		12.68	□□□□□ -0.38
PCBP2-222	ENST00000552296	PNPLA7	Q6ZV29	1317 aa		12.68	□□□□□ -0.38
PCBP2-222	ENST00000552296	TMC1	Q8TDI8	760 aa		12.67	□□□□□ -0.38
PCBP2-222	ENST00000552296	ITGB4	P16144	1822 aa		12.67	□□□□□ -0.38
PCBP2-222	ENST00000552296	KIF20B	Q96Q89	1820 aa		12.67	□□□□□ -0.38
PCBP2-222	ENST00000552296	C5	P01031	1676 aa		12.67	□□□□□ -0.38
PCBP2-222	ENST00000552296	ANKRD36B	Q8N2N9	1353 aa		12.67	□□□□□ -0.38
PCBP2-222	ENST00000552296	TOGARAM1	Q9Y4F4	1720 aa		12.67	□□□□□ -0.38
PCBP2-222	ENST00000552296	MAP3K19	Q56UN5	1328 aa		12.67	□□□□□ -0.38
PCBP2-222	ENST00000552296	TERF2IP	Q9NYB0	399 aa		12.66	□□□□□ -0.38
PCBP2-222	ENST00000552296	KCNA4	P22459	653 aa		12.65	□□□□□ -0.38
PCBP2-222	ENST00000552296	FBLN1	P23142	703 aa		12.65	□□□□□ -0.38
PCBP2-222	ENST00000552296	HOXC9	P31274	260 aa		12.65	□□□□□ -0.38
PCBP2-222	ENST00000552296	SLC27A3	Q5K4L6	730 aa		12.65	□□□□□ -0.38
PCBP2-222	ENST00000552296	SLC16A10	Q8TF71	515 aa		12.65	□□□□□ -0.38
PCBP2-222	ENST00000552296	PKD1L3	Q7Z443	1732 aa		12.64	□□□□□ -0.39
PCBP2-222	ENST00000552296	ANKRD26	Q9UPS8	1709 aa		12.64	□□□□□ -0.39
PCBP2-222	ENST00000552296	RTL1	A6NKG5	1358 aa		12.63	□□□□□ -0.39
PCBP2-222	ENST00000552296	KCNQ4	P56696	695 aa		12.63	□□□□□ -0.39
PCBP2-222	ENST00000552296	DDX54	Q8TDD1	881 aa	Known RBP	12.63	□□□□□ -0.39
PCBP2-222	ENST00000552296	MAP2	P11137	1827 aa	Known RBP	12.63	□□□□□ -0.39
PCBP2-222	ENST00000552296	UBR3	Q6ZT12	1888 aa		12.63	□□□□□ -0.39
PCBP2-222	ENST00000552296	ST20-MTHFS	A0A0A6YYL1	179 aa		12.62	□□□□□ -0.39
PCBP2-222	ENST00000552296	PRIM1	P49642	420 aa	Known RBP	12.62	□□□□□ -0.39
PCBP2-222	ENST00000552296	LTV1	Q96GA3	475 aa	Predicted RBP	12.62	□□□□□ -0.39
PCBP2-222	ENST00000552296	TONSL	Q96HA7	1378 aa		12.61	□□□□□ -0.39
PCBP2-222	ENST00000552296	NBPF6	Q5VWK0	638 aa		12.61	□□□□□ -0.39
PCBP2-222	ENST00000552296	COG3	Q96JB2	828 aa		12.61	□□□□□ -0.39
PCBP2-222	ENST00000552296	NBPF4	Q96M43	638 aa		12.61	□□□□□ -0.39
PCBP2-222	ENST00000552296	FYB1	O15117	783 aa		12.6	□□□□□ -0.39
PCBP2-222	ENST00000552296	NCAPD2	Q15021	1401 aa		12.6	□□□□□ -0.39
PCBP2-222	ENST00000552296	NLGN2	Q8NFZ4	835 aa		12.6	□□□□□ -0.39
PCBP2-222	ENST00000552296	ZCRB1	Q8TBF4	217 aa	Known RBP	12.6	□□□□□ -0.39
PCBP2-222	ENST00000552296	C4B	P0C0L5	1744 aa		12.59	□□□□□ -0.39
PCBP2-222	ENST00000552296	C1QTNF8	P60827	252 aa		12.59	□□□□□ -0.39
PCBP2-222	ENST00000552296	RRS1	Q15050	365 aa	Known RBP	12.58	□□□□□ -0.4
PCBP2-222	ENST00000552296	TFCP2L1	Q9NZI6	479 aa		12.58	□□□□□ -0.4
PCBP2-222	ENST00000552296	CGNL1	Q0VF96	1302 aa		12.57	□□□□□ -0.4
PCBP2-222	ENST00000552296	INSR	P06213	1382 aa		12.57	□□□□□ -0.4
PCBP2-222	ENST00000552296	YBX3	P16989	372 aa	Known RBP eCLIP	12.57	□□□□□ -0.4	1e-24	■□□□□ 11
PCBP2-222	ENST00000552296	POLD1	P28340	1107 aa		12.57	□□□□□ -0.4
PCBP2-222	ENST00000552296	AMPH	P49418	695 aa		12.57	□□□□□ -0.4
PCBP2-222	ENST00000552296	COL23A1	Q86Y22	540 aa	Predicted RBP	12.57	□□□□□ -0.4
PCBP2-222	ENST00000552296	USHBP1	Q8N6Y0	703 aa		12.57	□□□□□ -0.4
PCBP2-222	ENST00000552296	SYTL4	Q96C24	671 aa	Predicted RBP	12.57	□□□□□ -0.4
PCBP2-222	ENST00000552296	CCNL1	Q9UK58	526 aa	Predicted RBP	12.57	□□□□□ -0.4
PCBP2-222	ENST00000552296	GPR162	Q16538	588 aa		12.56	□□□□□ -0.4
PCBP2-222	ENST00000552296	GGNBP2	Q9H3C7	697 aa		12.56	□□□□□ -0.4
PCBP2-222	ENST00000552296	KIF24	Q5T7B8	1368 aa		12.55	□□□□□ -0.4
PCBP2-222	ENST00000552296	USP47	Q96K76	1375 aa		12.55	□□□□□ -0.4
PCBP2-222	ENST00000552296	SLC24A1	O60721	1099 aa		12.55	□□□□□ -0.4
PCBP2-222	ENST00000552296	HSP90AB2P	Q58FF8	381 aa		12.55	□□□□□ -0.4
PCBP2-222	ENST00000552296	KIAA1551	Q9HCM1	1747 aa		12.55	□□□□□ -0.4
PCBP2-222	ENST00000552296	KIF13B	Q9NQT8	1826 aa		12.54	□□□□□ -0.4
PCBP2-222	ENST00000552296	CYP27B1	O15528	508 aa		12.54	□□□□□ -0.4
PCBP2-222	ENST00000552296	AMIGO3	Q86WK7	504 aa		12.54	□□□□□ -0.4
PCBP2-222	ENST00000552296	FLT4	P35916	1363 aa		12.54	□□□□□ -0.4
PCBP2-222	ENST00000552296	PCDH11X	Q9BZA7	1347 aa		12.53	□□□□□ -0.4
PCBP2-222	ENST00000552296	PCDH11Y	Q9BZA8	1340 aa		12.53	□□□□□ -0.4
PCBP2-222	ENST00000552296	SMG6	Q86US8	1419 aa	Known RBP	12.53	□□□□□ -0.4
PCBP2-222	ENST00000552296	SENP3-EIF4A1	A0A087X0R7	540 aa		12.52	□□□□□ -0.41
PCBP2-222	ENST00000552296	CARD14	Q9BXL6	1004 aa		12.52	□□□□□ -0.41
PCBP2-222	ENST00000552296	PALLD	Q8WX93	1383 aa		12.52	□□□□□ -0.41
PCBP2-222	ENST00000552296	ZNF831	Q5JPB2	1677 aa		12.52	□□□□□ -0.41
PCBP2-222	ENST00000552296	ADCY9	O60503	1353 aa		12.51	□□□□□ -0.41
PCBP2-222	ENST00000552296	TAT	P17735	454 aa	Predicted RBP	12.51	□□□□□ -0.41
PCBP2-222	ENST00000552296	KLHL34	Q8N239	644 aa		12.51	□□□□□ -0.41
PCBP2-222	ENST00000552296	RAPGEF4	Q8WZA2	1011 aa		12.51	□□□□□ -0.41
PCBP2-222	ENST00000552296	COL5A3	P25940	1745 aa	Predicted RBP	12.5	□□□□□ -0.41
PCBP2-222	ENST00000552296	TMF1	P82094	1093 aa		12.5	□□□□□ -0.41
PCBP2-222	ENST00000552296	NKX1-1	Q15270	411 aa	Predicted RBP	12.5	□□□□□ -0.41
PCBP2-222	ENST00000552296	MSL1	Q68DK7	614 aa		12.5	□□□□□ -0.41
PCBP2-222	ENST00000552296	BRCA1	P38398	1863 aa	Known RBP	12.5	□□□□□ -0.41
PCBP2-222	ENST00000552296	CIC	Q96RK0	1608 aa	Predicted RBP	12.5	□□□□□ -0.41
PCBP2-222	ENST00000552296	TRIM26	Q12899	539 aa	Predicted RBP	12.49	□□□□□ -0.41
PCBP2-222	ENST00000552296	CD2AP	Q9Y5K6	639 aa		12.49	□□□□□ -0.41
PCBP2-222	ENST00000552296	EMILIN1	Q9Y6C2	1016 aa		12.49	□□□□□ -0.41
PCBP2-222	ENST00000552296	NSD3	Q9BZ95	1437 aa		12.48	□□□□□ -0.41
PCBP2-222	ENST00000552296	GRIN3B	O60391	1043 aa		12.48	□□□□□ -0.41
PCBP2-222	ENST00000552296	GIGYF1	O75420	1035 aa	Predicted RBP	12.48	□□□□□ -0.41
PCBP2-222	ENST00000552296	PELP1	Q8IZL8	1130 aa	Known RBP	12.48	□□□□□ -0.41
PCBP2-222	ENST00000552296	PIGB	Q92521	554 aa		12.48	□□□□□ -0.41
PCBP2-222	ENST00000552296	MYH14	Q7Z406	1995 aa	Known RBP	12.48	□□□□□ -0.41
PCBP2-222	ENST00000552296	ATP10D	Q9P241	1426 aa		12.48	□□□□□ -0.41
PCBP2-222	ENST00000552296	MPRIP	Q6WCQ1	1025 aa		12.47	□□□□□ -0.41
PCBP2-222	ENST00000552296	FLAD1	Q8NFF5	587 aa		12.47	□□□□□ -0.41
PCBP2-222	ENST00000552296	N4BP2	Q86UW6	1770 aa	Predicted RBP	12.47	□□□□□ -0.41
PCBP2-222	ENST00000552296	WASHC2A	Q641Q2	1341 aa		12.46	□□□□□ -0.41
PCBP2-222	ENST00000552296	SMIM5	Q71RC9	77 aa		12.46	□□□□□ -0.41
PCBP2-222	ENST00000552296		U3KPZ7	1027 aa	Predicted RBP	12.46	□□□□□ -0.41
PCBP2-222	ENST00000552296	C4A	P0C0L4	1744 aa		12.46	□□□□□ -0.41
PCBP2-222	ENST00000552296	LINC00116	Q8NCU8	138 aa		12.45	□□□□□ -0.42
PCBP2-222	ENST00000552296	SMARCC1	Q92922	1105 aa	Predicted RBP	12.45	□□□□□ -0.42
PCBP2-222	ENST00000552296	EYA1	Q99502	592 aa		12.44	□□□□□ -0.42
PCBP2-222	ENST00000552296	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	12.44	□□□□□ -0.42	1e-18	■□□□□ 8.4

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