RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 OXLD1Q5BKU9 147 aa6.63□□□□□ -1.35
LSM6P2-201ENST00000552208 RNF20Q5VTR2 975 aa6.63□□□□□ -1.35
LSM6P2-201ENST00000552208 BAP1Q92560 729 aa6.63□□□□□ -1.35
LSM6P2-201ENST00000552208 MRRFQ96E11 262 aaKnown RBP6.63□□□□□ -1.35
LSM6P2-201ENST00000552208 ANKRD33BA6NCL7 494 aa6.62□□□□□ -1.35
LSM6P2-201ENST00000552208 BPHLQ86WA6 291 aaPredicted RBP6.62□□□□□ -1.35
LSM6P2-201ENST00000552208 TPCN2Q8NHX9 752 aa6.62□□□□□ -1.35
LSM6P2-201ENST00000552208 FOXJ1Q92949 421 aa6.62□□□□□ -1.35
LSM6P2-201ENST00000552208 KCTD12Q96CX2 325 aaKnown RBP6.62□□□□□ -1.35
LSM6P2-201ENST00000552208 BCL2L13Q9BXK5 485 aa6.62□□□□□ -1.35
LSM6P2-201ENST00000552208 CARD14Q9BXL6 1004 aa6.62□□□□□ -1.35
LSM6P2-201ENST00000552208 MAGEB6P1A0A0J9YX57 407 aa6.61□□□□□ -1.35
LSM6P2-201ENST00000552208 M0R2N6 131 aa6.61□□□□□ -1.35
LSM6P2-201ENST00000552208 USP4Q13107 963 aa6.61□□□□□ -1.35
LSM6P2-201ENST00000552208 CCDC125Q86Z20 511 aa6.61□□□□□ -1.35
LSM6P2-201ENST00000552208 CCDC24Q8N4L8 307 aa6.61□□□□□ -1.35
LSM6P2-201ENST00000552208 ZNF511Q8NB15 262 aa6.61□□□□□ -1.35
LSM6P2-201ENST00000552208 BIN2Q9UBW5 565 aaPredicted RBP6.61□□□□□ -1.35
LSM6P2-201ENST00000552208 VAMP1P23763 118 aa6.6□□□□□ -1.35
LSM6P2-201ENST00000552208 ZNF211Q13398 564 aaPredicted RBP6.6□□□□□ -1.35
LSM6P2-201ENST00000552208 FBXO33Q7Z6M2 555 aa6.6□□□□□ -1.35
LSM6P2-201ENST00000552208 TRMT44Q8IYL2 757 aaKnown RBP6.6□□□□□ -1.35
LSM6P2-201ENST00000552208 SEPT12Q8IYM1 358 aa6.6□□□□□ -1.35
LSM6P2-201ENST00000552208 GIPC2Q8TF65 315 aa6.6□□□□□ -1.35
LSM6P2-201ENST00000552208 DNMT3AQ9Y6K1 912 aaPredicted RBP6.6□□□□□ -1.35
LSM6P2-201ENST00000552208 C21orf2O43822 256 aa6.59□□□□□ -1.35
LSM6P2-201ENST00000552208 ARHGAP4P98171 946 aa6.59□□□□□ -1.35
LSM6P2-201ENST00000552208 TJAP1Q5JTD0 557 aa6.59□□□□□ -1.35
LSM6P2-201ENST00000552208 CAPN12Q6ZSI9 719 aa6.59□□□□□ -1.35
LSM6P2-201ENST00000552208 GTF3C2Q8WUA4 911 aaPredicted RBP6.59□□□□□ -1.35
LSM6P2-201ENST00000552208 MTRQ99707 1265 aa6.59□□□□□ -1.35
LSM6P2-201ENST00000552208 SLC6A16Q9GZN6 736 aa6.59□□□□□ -1.35
LSM6P2-201ENST00000552208 SEPT3Q9UH03 358 aa6.59□□□□□ -1.35
LSM6P2-201ENST00000552208 H3BRB1 525 aa6.58□□□□□ -1.36
LSM6P2-201ENST00000552208 LCE2BO14633 110 aa6.58□□□□□ -1.36
LSM6P2-201ENST00000552208 ABL1P00519 1130 aa6.58□□□□□ -1.36
LSM6P2-201ENST00000552208 FKBP5Q13451 457 aaPredicted RBP6.58□□□□□ -1.36
LSM6P2-201ENST00000552208 NBPF20Q3BBV1 942 aa6.58□□□□□ -1.36
LSM6P2-201ENST00000552208 LINC01559Q495D7 138 aa6.58□□□□□ -1.36
LSM6P2-201ENST00000552208 ZNF516Q92618 1163 aa6.58□□□□□ -1.36
LSM6P2-201ENST00000552208 COL26A1Q96A83 441 aa6.58□□□□□ -1.36
LSM6P2-201ENST00000552208 SLC10A4Q96EP9 437 aa6.58□□□□□ -1.36
LSM6P2-201ENST00000552208 PURBQ96QR8 312 aaKnown RBP6.58□□□□□ -1.36
LSM6P2-201ENST00000552208 TUT1Q9H6E5 874 aaKnown RBP6.58□□□□□ -1.36
LSM6P2-201ENST00000552208 ANO2Q9NQ90 1003 aa6.58□□□□□ -1.36
LSM6P2-201ENST00000552208 RBM19Q9Y4C8 960 aaKnown RBP6.58□□□□□ -1.36
LSM6P2-201ENST00000552208 PCDHB11Q9Y5F2 797 aa6.58□□□□□ -1.36
LSM6P2-201ENST00000552208 LGR5O75473 907 aa6.57□□□□□ -1.36
LSM6P2-201ENST00000552208 SH3BP2P78314 561 aa6.57□□□□□ -1.36
LSM6P2-201ENST00000552208 FKBP4Q02790 459 aaKnown RBP eCLIP6.57□□□□□ -1.36
LSM6P2-201ENST00000552208 SF3B2Q13435 895 aaKnown RBP6.57□□□□□ -1.36
LSM6P2-201ENST00000552208 COL19A1Q14993 1142 aa6.57□□□□□ -1.36
LSM6P2-201ENST00000552208 GLYCTKQ8IVS8 523 aa6.57□□□□□ -1.36
LSM6P2-201ENST00000552208 TSEN2Q8NCE0 465 aaKnown RBP6.57□□□□□ -1.36
LSM6P2-201ENST00000552208 ASB16Q96NS5 453 aa6.57□□□□□ -1.36
LSM6P2-201ENST00000552208 CDV3Q9UKY7 258 aaKnown RBP6.57□□□□□ -1.36
LSM6P2-201ENST00000552208 SHROOM4Q9ULL8 1493 aa6.56□□□□□ -1.36
LSM6P2-201ENST00000552208 NPR3P17342 541 aa6.56□□□□□ -1.36
LSM6P2-201ENST00000552208 PSME1Q06323 249 aa6.56□□□□□ -1.36
LSM6P2-201ENST00000552208 AGERQ15109 404 aa6.56□□□□□ -1.36
LSM6P2-201ENST00000552208 ZNF326Q5BKZ1 582 aaKnown RBP6.56□□□□□ -1.36
LSM6P2-201ENST00000552208 HINFPQ9BQA5 517 aa6.56□□□□□ -1.36
LSM6P2-201ENST00000552208 IL21Q9HBE4 155 aa6.56□□□□□ -1.36
LSM6P2-201ENST00000552208 DCTN4Q9UJW0 460 aa6.56□□□□□ -1.36
LSM6P2-201ENST00000552208 TMEM229AB2RXF0 380 aa6.55□□□□□ -1.36
LSM6P2-201ENST00000552208 PTCD1O75127 700 aaKnown RBP6.55□□□□□ -1.36
LSM6P2-201ENST00000552208 SCTRP47872 440 aa6.55□□□□□ -1.36
LSM6P2-201ENST00000552208 PTPN5P54829 565 aa6.55□□□□□ -1.36
LSM6P2-201ENST00000552208 TAGLNQ01995 201 aaKnown RBP6.55□□□□□ -1.36
LSM6P2-201ENST00000552208 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.55□□□□□ -1.36
LSM6P2-201ENST00000552208 ZNF358Q9NW07 568 aa6.55□□□□□ -1.36
LSM6P2-201ENST00000552208 FCF1Q9Y324 198 aaKnown RBP6.55□□□□□ -1.36
LSM6P2-201ENST00000552208 TCF3P15923 654 aa6.54□□□□□ -1.36
LSM6P2-201ENST00000552208 IGFBP4P22692 258 aa6.54□□□□□ -1.36
LSM6P2-201ENST00000552208 MTMR3Q13615 1198 aa6.54□□□□□ -1.36
LSM6P2-201ENST00000552208 LAPTM4AQ15012 233 aa6.54□□□□□ -1.36
LSM6P2-201ENST00000552208 KCTD15Q96SI1 283 aaPredicted RBP6.54□□□□□ -1.36
LSM6P2-201ENST00000552208 WASLO00401 505 aaPredicted RBP6.53□□□□□ -1.36
LSM6P2-201ENST00000552208 S1PR4O95977 384 aa6.53□□□□□ -1.36
LSM6P2-201ENST00000552208 MAPK1P28482 360 aa6.53□□□□□ -1.36
LSM6P2-201ENST00000552208 SCNN1DP51172 638 aa6.53□□□□□ -1.36
LSM6P2-201ENST00000552208 ERVK-9P63128 1117 aa6.53□□□□□ -1.36
LSM6P2-201ENST00000552208 NKX2-3Q8TAU0 364 aa6.53□□□□□ -1.36
LSM6P2-201ENST00000552208 HELQQ8TDG4 1101 aa6.53□□□□□ -1.36
LSM6P2-201ENST00000552208 MKNK1Q9BUB5 465 aa6.53□□□□□ -1.36
LSM6P2-201ENST00000552208 MAP4K5Q9Y4K4 846 aa6.53□□□□□ -1.36
LSM6P2-201ENST00000552208 ERVH48-1M5A8F1 160 aa6.52□□□□□ -1.37
LSM6P2-201ENST00000552208 FOXO3O43524 673 aa6.52□□□□□ -1.37
LSM6P2-201ENST00000552208 EPHA4P54764 986 aa6.52□□□□□ -1.37
LSM6P2-201ENST00000552208 INTS6LQ5JSJ4 861 aaKnown RBP6.52□□□□□ -1.37
LSM6P2-201ENST00000552208 RGL4Q8IZJ4 473 aa6.52□□□□□ -1.37
LSM6P2-201ENST00000552208 GAS2L2Q8NHY3 880 aa6.52□□□□□ -1.37
LSM6P2-201ENST00000552208 RECKO95980 971 aa6.51□□□□□ -1.37
LSM6P2-201ENST00000552208 MYCP01106 439 aaPredicted RBP6.51□□□□□ -1.37
LSM6P2-201ENST00000552208 ZSCAN29Q8IWY8 852 aaPredicted RBP6.51□□□□□ -1.37
LSM6P2-201ENST00000552208 OSBPL3Q9H4L5 887 aa6.51□□□□□ -1.37
LSM6P2-201ENST00000552208 USP35Q9P2H5 1018 aa6.51□□□□□ -1.37
LSM6P2-201ENST00000552208 VARSP26640 1264 aaKnown RBP6.5□□□□□ -1.37
LSM6P2-201ENST00000552208 NAA30Q147X3 362 aaPredicted RBP6.5□□□□□ -1.37
LSM6P2-201ENST00000552208 SLC4A9Q96Q91 983 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms