RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 KTN1Q86UP2 1357 aaKnown RBP9.79□□□□□ -0.84
PRPF40B-214ENST00000551320 YY1P25490 414 aa9.79□□□□□ -0.84
PRPF40B-214ENST00000551320 SPON1Q9HCB6 807 aa9.79□□□□□ -0.84
PRPF40B-214ENST00000551320 NLRP2Q9NX02 1062 aa9.79□□□□□ -0.84
PRPF40B-214ENST00000551320 OVOS2A0A0G2JMS6 1433 aa9.79□□□□□ -0.84
PRPF40B-214ENST00000551320 OVOS2A0A0J9YW53 1432 aa9.79□□□□□ -0.84
PRPF40B-214ENST00000551320 OVOS2Q6IE36 1432 aa9.79□□□□□ -0.84
PRPF40B-214ENST00000551320 SBF2Q86WG5 1849 aa9.79□□□□□ -0.84
PRPF40B-214ENST00000551320 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.78□□□□□ -0.84
PRPF40B-214ENST00000551320 STK25O00506 426 aa9.78□□□□□ -0.84
PRPF40B-214ENST00000551320 ZNF467Q7Z7K2 595 aaPredicted RBP9.78□□□□□ -0.84
PRPF40B-214ENST00000551320 ZFP91Q96JP5 570 aaPredicted RBP9.78□□□□□ -0.84
PRPF40B-214ENST00000551320 PCDHB8Q9UN66 801 aa9.78□□□□□ -0.84
PRPF40B-214ENST00000551320 PCDHB13Q9Y5F0 798 aa9.78□□□□□ -0.84
PRPF40B-214ENST00000551320 C19orf67A6NJJ6 358 aa9.77□□□□□ -0.85
PRPF40B-214ENST00000551320 TXNRD1Q16881 649 aa9.77□□□□□ -0.85
PRPF40B-214ENST00000551320 KIF12Q96FN5 646 aa9.77□□□□□ -0.85
PRPF40B-214ENST00000551320 CARD10Q9BWT7 1032 aa9.77□□□□□ -0.85
PRPF40B-214ENST00000551320 NFAT5O94916 1531 aa9.77□□□□□ -0.85
PRPF40B-214ENST00000551320 PARD3Q8TEW0 1356 aa9.76□□□□□ -0.85
PRPF40B-214ENST00000551320 EXOC5O00471 708 aa9.76□□□□□ -0.85
PRPF40B-214ENST00000551320 MAP3K13O43283 966 aa9.76□□□□□ -0.85
PRPF40B-214ENST00000551320 PTGER2P43116 358 aa9.76□□□□□ -0.85
PRPF40B-214ENST00000551320 PHF12Q96QT6 1004 aa9.76□□□□□ -0.85
PRPF40B-214ENST00000551320 CARD11Q9BXL7 1154 aa9.76□□□□□ -0.85
PRPF40B-214ENST00000551320 CD163L1Q9NR16 1453 aa9.76□□□□□ -0.85
PRPF40B-214ENST00000551320 KAT6BQ8WYB5 2073 aa9.75□□□□□ -0.85
PRPF40B-214ENST00000551320 PLSCR1O15162 318 aa9.75□□□□□ -0.85
PRPF40B-214ENST00000551320 PAXIP1Q6ZW49 1069 aaPredicted RBP9.75□□□□□ -0.85
PRPF40B-214ENST00000551320 ANKRD24Q8TF21 1146 aa9.75□□□□□ -0.85
PRPF40B-214ENST00000551320 SGIP1Q9BQI5 828 aa9.75□□□□□ -0.85
PRPF40B-214ENST00000551320 GOLGB1Q14789 3259 aaKnown RBP9.75□□□□□ -0.85
PRPF40B-214ENST00000551320 AKAP12Q02952 1782 aa9.75□□□□□ -0.85
PRPF40B-214ENST00000551320 WNK3Q9BYP7 1800 aa9.75□□□□□ -0.85
PRPF40B-214ENST00000551320 SBNO2Q9Y2G9 1366 aa9.75□□□□□ -0.85
PRPF40B-214ENST00000551320 ZNF827Q17R98 1081 aa9.74□□□□□ -0.85
PRPF40B-214ENST00000551320 ZNF579Q8NAF0 562 aaKnown RBP9.74□□□□□ -0.85
PRPF40B-214ENST00000551320 KCNH5Q8NCM2 988 aa9.74□□□□□ -0.85
PRPF40B-214ENST00000551320 DDX54Q8TDD1 881 aaKnown RBP9.74□□□□□ -0.85
PRPF40B-214ENST00000551320 FHDC1Q9C0D6 1143 aaPredicted RBP9.74□□□□□ -0.85
PRPF40B-214ENST00000551320 LRRC4BQ9NT99 713 aa9.74□□□□□ -0.85
PRPF40B-214ENST00000551320 MYOM1P52179 1685 aa9.74□□□□□ -0.85
PRPF40B-214ENST00000551320 SLC15A2Q16348 729 aa9.73□□□□□ -0.85
PRPF40B-214ENST00000551320 IFNL1Q8IU54 200 aa9.73□□□□□ -0.85
PRPF40B-214ENST00000551320 USHBP1Q8N6Y0 703 aa9.73□□□□□ -0.85
PRPF40B-214ENST00000551320 CFAP44Q96MT7 982 aa9.73□□□□□ -0.85
PRPF40B-214ENST00000551320 STK32BQ9NY57 414 aa9.73□□□□□ -0.85
PRPF40B-214ENST00000551320 STK24Q9Y6E0 443 aa9.73□□□□□ -0.85
PRPF40B-214ENST00000551320 CASZ1Q86V15 1759 aa9.73□□□□□ -0.85
PRPF40B-214ENST00000551320 SYTL4Q96C24 671 aaPredicted RBP9.72□□□□□ -0.85
PRPF40B-214ENST00000551320 ERBB3P21860 1342 aa9.72□□□□□ -0.85
PRPF40B-214ENST00000551320 TTC21AQ8NDW8 1320 aa9.72□□□□□ -0.85
PRPF40B-214ENST00000551320 A0A1W2PP64 1363 aa9.72□□□□□ -0.85
PRPF40B-214ENST00000551320 IL2RBP14784 551 aa9.71□□□□□ -0.86
PRPF40B-214ENST00000551320 PDAP1Q13442 181 aaKnown RBP9.71□□□□□ -0.86
PRPF40B-214ENST00000551320 SMIM5Q71RC9 77 aa9.71□□□□□ -0.86
PRPF40B-214ENST00000551320 BRD4O60885 1362 aaPredicted RBP9.71□□□□□ -0.86
PRPF40B-214ENST00000551320 ST20-MTHFSA0A0A6YYL1 179 aa9.7□□□□□ -0.86
PRPF40B-214ENST00000551320 HAX1O00165 279 aa9.7□□□□□ -0.86
PRPF40B-214ENST00000551320 RRS1Q15050 365 aaKnown RBP9.7□□□□□ -0.86
PRPF40B-214ENST00000551320 SPRYD3Q8NCJ5 442 aa9.7□□□□□ -0.86
PRPF40B-214ENST00000551320 SYT17Q9BSW7 474 aa9.7□□□□□ -0.86
PRPF40B-214ENST00000551320 TNS2Q63HR2 1409 aa9.7□□□□□ -0.86
PRPF40B-214ENST00000551320 MON2Q7Z3U7 1717 aa9.7□□□□□ -0.86
PRPF40B-214ENST00000551320 LTN1O94822 1766 aa9.7□□□□□ -0.86
PRPF40B-214ENST00000551320 PRIM1P49642 420 aaKnown RBP9.69□□□□□ -0.86
PRPF40B-214ENST00000551320 PSEN1P49768 467 aa9.69□□□□□ -0.86
PRPF40B-214ENST00000551320 NKX1-1Q15270 411 aaPredicted RBP9.69□□□□□ -0.86
PRPF40B-214ENST00000551320 HDGFL2Q7Z4V5 671 aaPredicted RBP9.69□□□□□ -0.86
PRPF40B-214ENST00000551320 PELP1Q8IZL8 1130 aaKnown RBP9.69□□□□□ -0.86
PRPF40B-214ENST00000551320 CCDC7Q96M83 1385 aa9.69□□□□□ -0.86
PRPF40B-214ENST00000551320 CDCA7Q9BWT1 371 aaPredicted RBP9.69□□□□□ -0.86
PRPF40B-214ENST00000551320 BTAF1O14981 1849 aa9.68□□□□□ -0.86
PRPF40B-214ENST00000551320 RGPD2P0DJD1 1756 aa9.68□□□□□ -0.86
PRPF40B-214ENST00000551320 USP31Q70CQ4 1352 aa9.68□□□□□ -0.86
PRPF40B-214ENST00000551320 NINLQ9Y2I6 1382 aa9.68□□□□□ -0.86
PRPF40B-214ENST00000551320 MAP3K19Q56UN5 1328 aa9.68□□□□□ -0.86
PRPF40B-214ENST00000551320 TESK2Q96S53 571 aa9.68□□□□□ -0.86
PRPF40B-214ENST00000551320 GGNBP2Q9H3C7 697 aa9.68□□□□□ -0.86
PRPF40B-214ENST00000551320 WWC3Q9ULE0 1092 aa9.68□□□□□ -0.86
PRPF40B-214ENST00000551320 MSL1Q68DK7 614 aa9.67□□□□□ -0.86
PRPF40B-214ENST00000551320 ZNF784Q8NCA9 323 aaPredicted RBP9.67□□□□□ -0.86
PRPF40B-214ENST00000551320 NLGN2Q8NFZ4 835 aa9.67□□□□□ -0.86
PRPF40B-214ENST00000551320 NHSQ6T4R5 1651 aa9.67□□□□□ -0.86
PRPF40B-214ENST00000551320 TONSLQ96HA7 1378 aa9.66□□□□□ -0.86
PRPF40B-214ENST00000551320 HOXC9P31274 260 aa9.66□□□□□ -0.86
PRPF40B-214ENST00000551320 AMPHP49418 695 aa9.66□□□□□ -0.86
PRPF40B-214ENST00000551320 NBPF6Q5VWK0 638 aa9.66□□□□□ -0.86
PRPF40B-214ENST00000551320 IP6K1Q92551 441 aa9.66□□□□□ -0.86
PRPF40B-214ENST00000551320 NBPF4Q96M43 638 aa9.66□□□□□ -0.86
PRPF40B-214ENST00000551320 ARXQ96QS3 562 aa9.66□□□□□ -0.86
PRPF40B-214ENST00000551320 MTFR1LQ9H019 292 aa9.66□□□□□ -0.86
PRPF40B-214ENST00000551320 EDC4Q6P2E9 1401 aaKnown RBP9.65□□□□□ -0.86
PRPF40B-214ENST00000551320 RGPD3A6NKT7 1758 aaPredicted RBP9.65□□□□□ -0.86
PRPF40B-214ENST00000551320 RGPD4Q7Z3J3 1758 aa9.65□□□□□ -0.86
PRPF40B-214ENST00000551320 PNPLA7Q6ZV29 1317 aa9.65□□□□□ -0.86
PRPF40B-214ENST00000551320 C11orf95C9JLR9 678 aaPredicted RBP9.65□□□□□ -0.86
PRPF40B-214ENST00000551320 EVX2Q03828 476 aa9.65□□□□□ -0.86
PRPF40B-214ENST00000551320 TERF2IPQ9NYB0 399 aa9.65□□□□□ -0.86
PRPF40B-214ENST00000551320 MEGF6O75095 1541 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms