RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 QSER1Q2KHR3 1735 aa16.22■□□□□ 0.19
PRPF40B-212ENST00000551111 MAP2P11137 1827 aaKnown RBP16.22■□□□□ 0.19
PRPF40B-212ENST00000551111 TMF1P82094 1093 aa16.21■□□□□ 0.19
PRPF40B-212ENST00000551111 CARD14Q9BXL6 1004 aa16.21■□□□□ 0.19
PRPF40B-212ENST00000551111 FHDC1Q9C0D6 1143 aaPredicted RBP16.21■□□□□ 0.19
PRPF40B-212ENST00000551111 NSD2O96028 1365 aa16.21■□□□□ 0.19
PRPF40B-212ENST00000551111 SYTL4Q96C24 671 aaPredicted RBP16.2■□□□□ 0.18
PRPF40B-212ENST00000551111 MTFR1LQ9H019 292 aa16.2■□□□□ 0.18
PRPF40B-212ENST00000551111 HSP90AB2PQ58FF8 381 aa16.19■□□□□ 0.18
PRPF40B-212ENST00000551111 ZCRB1Q8TBF4 217 aaKnown RBP16.19■□□□□ 0.18
PRPF40B-212ENST00000551111 AKT1S1Q96B36 256 aa16.19■□□□□ 0.18
PRPF40B-212ENST00000551111 SYT17Q9BSW7 474 aa16.19■□□□□ 0.18
PRPF40B-212ENST00000551111 CHD4Q14839 1912 aa16.19■□□□□ 0.18
PRPF40B-212ENST00000551111 ITGB4P16144 1822 aa16.19■□□□□ 0.18
PRPF40B-212ENST00000551111 COL24A1Q17RW2 1714 aa16.19■□□□□ 0.18
PRPF40B-212ENST00000551111 RTL1A6NKG5 1358 aa16.16■□□□□ 0.18
PRPF40B-212ENST00000551111 EMILIN1Q9Y6C2 1016 aa16.16■□□□□ 0.18
PRPF40B-212ENST00000551111 TAF1LQ8IZX4 1826 aa16.16■□□□□ 0.18
PRPF40B-212ENST00000551111 TOGARAM1Q9Y4F4 1720 aa16.16■□□□□ 0.18
PRPF40B-212ENST00000551111 PNPLA7Q6ZV29 1317 aa16.16■□□□□ 0.18
PRPF40B-212ENST00000551111 SLC24A1O60721 1099 aa16.15■□□□□ 0.18
PRPF40B-212ENST00000551111 ARXQ96QS3 562 aa16.14■□□□□ 0.17
PRPF40B-212ENST00000551111 GOLGB1Q14789 3259 aaKnown RBP16.14■□□□□ 0.17
PRPF40B-212ENST00000551111 ANKRD26Q9UPS8 1709 aa16.14■□□□□ 0.17
PRPF40B-212ENST00000551111 INSRP06213 1382 aa16.13■□□□□ 0.17
PRPF40B-212ENST00000551111 NSD3Q9BZ95 1437 aa16.13■□□□□ 0.17
PRPF40B-212ENST00000551111 SLC27A3Q5K4L6 730 aa16.13■□□□□ 0.17
PRPF40B-212ENST00000551111 FLT4P35916 1363 aa16.12■□□□□ 0.17
PRPF40B-212ENST00000551111 C5P01031 1676 aa16.11■□□□□ 0.17
PRPF40B-212ENST00000551111 PKD1L3Q7Z443 1732 aa16.11■□□□□ 0.17
PRPF40B-212ENST00000551111 DCAF8L1A6NGE4 600 aa16.11■□□□□ 0.17
PRPF40B-212ENST00000551111 CYP27B1O15528 508 aa16.11■□□□□ 0.17
PRPF40B-212ENST00000551111 RAPGEF4Q8WZA2 1011 aa16.11■□□□□ 0.17
PRPF40B-212ENST00000551111 PCGF6Q9BYE7 350 aa16.11■□□□□ 0.17
PRPF40B-212ENST00000551111 TFCP2L1Q9NZI6 479 aa16.11■□□□□ 0.17
PRPF40B-212ENST00000551111 TATP17735 454 aaPredicted RBP16.1■□□□□ 0.17
PRPF40B-212ENST00000551111 CCNL1Q9UK58 526 aaPredicted RBP16.1■□□□□ 0.17
PRPF40B-212ENST00000551111 SMG6Q86US8 1419 aaKnown RBP16.09■□□□□ 0.17
PRPF40B-212ENST00000551111 PPM1GO15355 546 aaPredicted RBP16.08■□□□□ 0.16
PRPF40B-212ENST00000551111 CDCA8Q53HL2 280 aa16.08■□□□□ 0.16
PRPF40B-212ENST00000551111 COL23A1Q86Y22 540 aaPredicted RBP16.08■□□□□ 0.16
PRPF40B-212ENST00000551111 CGNL1Q0VF96 1302 aa16.08■□□□□ 0.16
PRPF40B-212ENST00000551111 SMIM5Q71RC9 77 aa16.07■□□□□ 0.16
PRPF40B-212ENST00000551111 KLHL34Q8N239 644 aa16.07■□□□□ 0.16
PRPF40B-212ENST00000551111 SLC16A10Q8TF71 515 aa16.07■□□□□ 0.16
PRPF40B-212ENST00000551111 POLR3GLQ9BT43 218 aa16.07■□□□□ 0.16
PRPF40B-212ENST00000551111 UBR3Q6ZT12 1888 aa16.06■□□□□ 0.16
PRPF40B-212ENST00000551111 NCAPD2Q15021 1401 aa16.06■□□□□ 0.16
PRPF40B-212ENST00000551111 KIF24Q5T7B8 1368 aa16.06■□□□□ 0.16
PRPF40B-212ENST00000551111 MAP3K5Q99683 1374 aa16.06■□□□□ 0.16
PRPF40B-212ENST00000551111 MPRIPQ6WCQ1 1025 aa16.06■□□□□ 0.16
PRPF40B-212ENST00000551111 AMIGO3Q86WK7 504 aa16.06■□□□□ 0.16
PRPF40B-212ENST00000551111 NLGN2Q8NFZ4 835 aa16.06■□□□□ 0.16
PRPF40B-212ENST00000551111 PCDH11XQ9BZA7 1347 aa16.05■□□□□ 0.16
PRPF40B-212ENST00000551111 PCDH11YQ9BZA8 1340 aa16.05■□□□□ 0.16
PRPF40B-212ENST00000551111 MSL1Q68DK7 614 aa16.05■□□□□ 0.16
PRPF40B-212ENST00000551111 ZNF784Q8NCA9 323 aaPredicted RBP16.05■□□□□ 0.16
PRPF40B-212ENST00000551111 EYA1Q99502 592 aa16.05■□□□□ 0.16
PRPF40B-212ENST00000551111 POLKQ9UBT6 870 aa16.05■□□□□ 0.16
PRPF40B-212ENST00000551111 MSH5O43196 834 aa16.04■□□□□ 0.16
PRPF40B-212ENST00000551111 TNNT2P45379 298 aaPredicted RBP16.04■□□□□ 0.16
PRPF40B-212ENST00000551111 C4BP0C0L5 1744 aa16.04■□□□□ 0.16
PRPF40B-212ENST00000551111 PALLDQ8WX93 1383 aa16.03■□□□□ 0.16
PRPF40B-212ENST00000551111 WASHC2AQ641Q2 1341 aa16.03■□□□□ 0.16
PRPF40B-212ENST00000551111 TIMELESSQ9UNS1 1208 aa16.03■□□□□ 0.16
PRPF40B-212ENST00000551111 POLD1P28340 1107 aa16.02■□□□□ 0.16
PRPF40B-212ENST00000551111 PIGBQ92521 554 aa16.02■□□□□ 0.16
PRPF40B-212ENST00000551111 HSPA5P11021 654 aaKnown RBP16.01■□□□□ 0.15
PRPF40B-212ENST00000551111 GPR162Q16538 588 aa16.01■□□□□ 0.15
PRPF40B-212ENST00000551111 EIF4A2Q14240 407 aaKnown RBP16■□□□□ 0.15
PRPF40B-212ENST00000551111 NKX1-1Q15270 411 aaPredicted RBP16■□□□□ 0.15
PRPF40B-212ENST00000551111 PELP1Q8IZL8 1130 aaKnown RBP15.99■□□□□ 0.15
PRPF40B-212ENST00000551111 CLSPNQ9HAW4 1339 aa15.98■□□□□ 0.15
PRPF40B-212ENST00000551111 YBX3P16989 372 aaKnown RBP eCLIP15.98■□□□□ 0.15
PRPF40B-212ENST00000551111 PANK3Q9H999 370 aa15.98■□□□□ 0.15
PRPF40B-212ENST00000551111 ASAP1Q9ULH1 1129 aa15.98■□□□□ 0.15
PRPF40B-212ENST00000551111 LINC00116Q8NCU8 138 aa15.97■□□□□ 0.15
PRPF40B-212ENST00000551111 SPG7Q9UQ90 795 aa15.97■□□□□ 0.15
PRPF40B-212ENST00000551111 PHKG2P15735 406 aa15.96■□□□□ 0.15
PRPF40B-212ENST00000551111 ITPK1Q13572 414 aa15.96■□□□□ 0.15
PRPF40B-212ENST00000551111 MYH14Q7Z406 1995 aaKnown RBP15.95■□□□□ 0.14
PRPF40B-212ENST00000551111 EIF4G2P78344 907 aaKnown RBP eCLIP15.95■□□□□ 0.14
PRPF40B-212ENST00000551111 LOC102724428A0A0B4J2F2 783 aa15.94■□□□□ 0.14
PRPF40B-212ENST00000551111 PHF14O94880 888 aa15.94■□□□□ 0.14
PRPF40B-212ENST00000551111 SIK1P57059 783 aa15.94■□□□□ 0.14
PRPF40B-212ENST00000551111 SMARCC1Q92922 1105 aaPredicted RBP15.94■□□□□ 0.14
PRPF40B-212ENST00000551111 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.94■□□□□ 0.14
PRPF40B-212ENST00000551111 VIRMAQ69YN4 1812 aaKnown RBP15.94■□□□□ 0.14
PRPF40B-212ENST00000551111 IFNL2Q8IZJ0 200 aa15.93■□□□□ 0.14
PRPF40B-212ENST00000551111 AK7Q96M32 723 aa15.93■□□□□ 0.14
PRPF40B-212ENST00000551111 SLC4A9Q96Q91 983 aa15.93■□□□□ 0.14
PRPF40B-212ENST00000551111 ATG3Q9NT62 314 aa15.93■□□□□ 0.14
PRPF40B-212ENST00000551111 IGSF1Q8N6C5 1336 aa15.93■□□□□ 0.14
PRPF40B-212ENST00000551111 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.92■□□□□ 0.14
PRPF40B-212ENST00000551111 AEBP1Q8IUX7 1158 aa15.92■□□□□ 0.14
PRPF40B-212ENST00000551111 TMOD3Q9NYL9 352 aa15.92■□□□□ 0.14
PRPF40B-212ENST00000551111 COL5A3P25940 1745 aaPredicted RBP15.91■□□□□ 0.14
PRPF40B-212ENST00000551111 WWC3Q9ULE0 1092 aa15.91■□□□□ 0.14
PRPF40B-212ENST00000551111 ATP6V1AP38606 617 aa15.9■□□□□ 0.14
PRPF40B-212ENST00000551111 FLAD1Q8NFF5 587 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms