RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 TATP17735 454 aaPredicted RBP17.45■□□□□ 0.38
RAB5C-206ENST00000550406 U2AF1Q01081 240 aaKnown RBP eCLIP17.45■□□□□ 0.38
RAB5C-206ENST00000550406 RAPGEF4Q8WZA2 1011 aa17.45■□□□□ 0.38
RAB5C-206ENST00000550406 PNISRQ8TF01 805 aaKnown RBP17.44■□□□□ 0.38
RAB5C-206ENST00000550406 MRS2Q9HD23 443 aa17.44■□□□□ 0.38
RAB5C-206ENST00000550406 A0A0G2JS52 829 aa17.43■□□□□ 0.38
RAB5C-206ENST00000550406 EXOC5O00471 708 aa17.43■□□□□ 0.38
RAB5C-206ENST00000550406 MYT1Q01538 1121 aa17.43■□□□□ 0.38
RAB5C-206ENST00000550406 DDB1Q16531 1140 aa17.43■□□□□ 0.38
RAB5C-206ENST00000550406 ADAMTS8Q9UP79 889 aa17.43■□□□□ 0.38
RAB5C-206ENST00000550406 TNS2Q63HR2 1409 aa17.43■□□□□ 0.38
RAB5C-206ENST00000550406 FCHSD2O94868 740 aa17.42■□□□□ 0.38
RAB5C-206ENST00000550406 MARCH10Q8NA82 808 aaPredicted RBP17.42■□□□□ 0.38
RAB5C-206ENST00000550406 ZCRB1Q8TBF4 217 aaKnown RBP17.42■□□□□ 0.38
RAB5C-206ENST00000550406 VIRMAQ69YN4 1812 aaKnown RBP17.42■□□□□ 0.38
RAB5C-206ENST00000550406 CCER2I3L3R5 266 aa17.41■□□□□ 0.38
RAB5C-206ENST00000550406 PRKAR2BP31323 418 aa17.41■□□□□ 0.38
RAB5C-206ENST00000550406 FAM182BQ5T319 152 aa17.41■□□□□ 0.38
RAB5C-206ENST00000550406 KRT27Q7Z3Y8 459 aa17.41■□□□□ 0.38
RAB5C-206ENST00000550406 PHACTR3Q96KR7 559 aa17.41■□□□□ 0.38
RAB5C-206ENST00000550406 PLEKHF1Q96S99 279 aa17.41■□□□□ 0.38
RAB5C-206ENST00000550406 SBF2Q86WG5 1849 aa17.41■□□□□ 0.38
RAB5C-206ENST00000550406 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.4■□□□□ 0.38
RAB5C-206ENST00000550406 DLG5Q8TDM6 1919 aa17.4■□□□□ 0.38
RAB5C-206ENST00000550406 PLEKHG2Q9H7P9 1386 aa17.4■□□□□ 0.38
RAB5C-206ENST00000550406 CYP27B1O15528 508 aa17.39■□□□□ 0.37
RAB5C-206ENST00000550406 PDE3BQ13370 1112 aa17.38■□□□□ 0.37
RAB5C-206ENST00000550406 WDR43Q15061 677 aaKnown RBP eCLIP17.38■□□□□ 0.37
RAB5C-206ENST00000550406 MTHFSDQ2M296 383 aaKnown RBP17.38■□□□□ 0.37
RAB5C-206ENST00000550406 PLEKHO1Q53GL0 409 aaPredicted RBP17.38■□□□□ 0.37
RAB5C-206ENST00000550406 DDX54Q8TDD1 881 aaKnown RBP17.38■□□□□ 0.37
RAB5C-206ENST00000550406 SPG7Q9UQ90 795 aa17.37■□□□□ 0.37
RAB5C-206ENST00000550406 TOGARAM1Q9Y4F4 1720 aa17.36■□□□□ 0.37
RAB5C-206ENST00000550406 AMOTQ4VCS5 1084 aa17.36■□□□□ 0.37
RAB5C-206ENST00000550406 CCDC146Q8IYE0 955 aa17.36■□□□□ 0.37
RAB5C-206ENST00000550406 KAT6BQ8WYB5 2073 aa17.36■□□□□ 0.37
RAB5C-206ENST00000550406 PHKG2P15735 406 aa17.35■□□□□ 0.37
RAB5C-206ENST00000550406 PCDH11XQ9BZA7 1347 aa17.35■□□□□ 0.37
RAB5C-206ENST00000550406 PCDH11YQ9BZA8 1340 aa17.35■□□□□ 0.37
RAB5C-206ENST00000550406 SCN11AQ9UI33 1791 aa17.35■□□□□ 0.37
RAB5C-206ENST00000550406 ITGB4P16144 1822 aa17.35■□□□□ 0.37
RAB5C-206ENST00000550406 NKX1-1Q15270 411 aaPredicted RBP17.34■□□□□ 0.37
RAB5C-206ENST00000550406 ZNF530Q6P9A1 599 aaPredicted RBP17.34■□□□□ 0.37
RAB5C-206ENST00000550406 DOT1LQ8TEK3 1739 aa17.33■□□□□ 0.37
RAB5C-206ENST00000550406 BCL9O00512 1426 aa17.33■□□□□ 0.36
RAB5C-206ENST00000550406 IFNL2Q8IZJ0 200 aa17.33■□□□□ 0.36
RAB5C-206ENST00000550406 ADAMTS7Q9UKP4 1686 aa17.32■□□□□ 0.36
RAB5C-206ENST00000550406 FAM9BQ8IZU0 186 aa17.32■□□□□ 0.36
RAB5C-206ENST00000550406 RUNDC1Q96C34 613 aa17.32■□□□□ 0.36
RAB5C-206ENST00000550406 PNNQ9H307 717 aaKnown RBP17.32■□□□□ 0.36
RAB5C-206ENST00000550406 FAM196AQ6ZSG2 479 aa17.31■□□□□ 0.36
RAB5C-206ENST00000550406 KDM6AO15550 1401 aaPredicted RBP17.3■□□□□ 0.36
RAB5C-206ENST00000550406 AKAP4Q5JQC9 854 aa17.3■□□□□ 0.36
RAB5C-206ENST00000550406 PTF1AQ7RTS3 328 aa17.3■□□□□ 0.36
RAB5C-206ENST00000550406 GAS2L2Q8NHY3 880 aa17.3■□□□□ 0.36
RAB5C-206ENST00000550406 NHSQ6T4R5 1651 aa17.29■□□□□ 0.36
RAB5C-206ENST00000550406 NFE2L2Q16236 605 aa17.29■□□□□ 0.36
RAB5C-206ENST00000550406 LGR6Q9HBX8 967 aa17.29■□□□□ 0.36
RAB5C-206ENST00000550406 TNS1Q9HBL0 1735 aaKnown RBP17.28■□□□□ 0.36
RAB5C-206ENST00000550406 KCNQ2O43526 872 aa17.28■□□□□ 0.36
RAB5C-206ENST00000550406 TMPOP42166 694 aaKnown RBP17.28■□□□□ 0.36
RAB5C-206ENST00000550406 C1orf141Q5JVX7 400 aa17.28■□□□□ 0.36
RAB5C-206ENST00000550406 MPRIPQ6WCQ1 1025 aa17.28■□□□□ 0.36
RAB5C-206ENST00000550406 ACSBG1Q96GR2 724 aa17.28■□□□□ 0.36
RAB5C-206ENST00000550406 SIPA1L3O60292 1781 aaPredicted RBP17.28■□□□□ 0.36
RAB5C-206ENST00000550406 MAPK8IP3Q9UPT6 1336 aa17.27■□□□□ 0.36
RAB5C-206ENST00000550406 BTAF1O14981 1849 aa17.27■□□□□ 0.36
RAB5C-206ENST00000550406 APAF1O14727 1248 aa17.27■□□□□ 0.36
RAB5C-206ENST00000550406 IL17REQ8NFR9 667 aa17.27■□□□□ 0.36
RAB5C-206ENST00000550406 RRP7AQ9Y3A4 280 aaKnown RBP17.27■□□□□ 0.36
RAB5C-206ENST00000550406 MAP3K5Q99683 1374 aa17.27■□□□□ 0.35
RAB5C-206ENST00000550406 SENP3-EIF4A1A0A087X0R7 540 aa17.26■□□□□ 0.35
RAB5C-206ENST00000550406 GNAT3A8MTJ3 354 aa17.26■□□□□ 0.35
RAB5C-206ENST00000550406 RNMTO43148 476 aaKnown RBP17.26■□□□□ 0.35
RAB5C-206ENST00000550406 DCAF5Q96JK2 942 aa17.26■□□□□ 0.35
RAB5C-206ENST00000550406 TRIM37O94972 964 aa17.25■□□□□ 0.35
RAB5C-206ENST00000550406 NEFMP07197 916 aa17.25■□□□□ 0.35
RAB5C-206ENST00000550406 HSP90AB1P08238 724 aaKnown RBP17.25■□□□□ 0.35
RAB5C-206ENST00000550406 PRIM1P49642 420 aaKnown RBP17.25■□□□□ 0.35
RAB5C-206ENST00000550406 EP400Q96L91 3159 aa17.25■□□□□ 0.35
RAB5C-206ENST00000550406 RIPK4P57078 832 aa17.24■□□□□ 0.35
RAB5C-206ENST00000550406 DCTN1Q14203 1278 aa17.24■□□□□ 0.35
RAB5C-206ENST00000550406 TRIM35Q9UPQ4 493 aa17.24■□□□□ 0.35
RAB5C-206ENST00000550406 ERVV-2B6SEH9 535 aa17.23■□□□□ 0.35
RAB5C-206ENST00000550406 NEUROD2Q15784 382 aa17.23■□□□□ 0.35
RAB5C-206ENST00000550406 MCM10Q7L590 875 aa17.23■□□□□ 0.35
RAB5C-206ENST00000550406 UPF1Q92900 1129 aaKnown RBP eCLIP17.23■□□□□ 0.35
RAB5C-206ENST00000550406 CEMIPQ8WUJ3 1361 aa17.23■□□□□ 0.35
RAB5C-206ENST00000550406 HTATSF1O43719 755 aaKnown RBP17.22■□□□□ 0.35
RAB5C-206ENST00000550406 BCL11BQ9C0K0 894 aaPredicted RBP17.22■□□□□ 0.35
RAB5C-206ENST00000550406 MRC1P22897 1456 aa17.22■□□□□ 0.35
RAB5C-206ENST00000550406 PIGBQ92521 554 aa17.21■□□□□ 0.35
RAB5C-206ENST00000550406 THUMPD2Q9BTF0 503 aaKnown RBP17.21■□□□□ 0.35
RAB5C-206ENST00000550406 NFATC2IPQ8NCF5 419 aa17.2■□□□□ 0.34
RAB5C-206ENST00000550406 SYTL4Q96C24 671 aaPredicted RBP17.2■□□□□ 0.34
RAB5C-206ENST00000550406 SLC52A2Q9HAB3 445 aa17.19■□□□□ 0.34
RAB5C-206ENST00000550406 PAPPAQ13219 1627 aa17.18■□□□□ 0.34
RAB5C-206ENST00000550406 CABP4P57796 275 aa17.18■□□□□ 0.34
RAB5C-206ENST00000550406 RTF1Q92541 710 aaKnown RBP17.18■□□□□ 0.34
RAB5C-206ENST00000550406 LY75O60449 1722 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms