RNA–Protein interactions for RNA: ENST00000550385.1

CHPT1-206, Transcript of choline phosphotransferase 1, humanhuman

TSL 5

Gene CHPT1, Length 754 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-206ENST00000550385 NFE2L2Q16236 605 aa13.95□□□□□ -0.18
CHPT1-206ENST00000550385 PLEKHO1Q53GL0 409 aaPredicted RBP13.95□□□□□ -0.18
CHPT1-206ENST00000550385 MEX3CQ5U5Q3 659 aaKnown RBP13.95□□□□□ -0.18
CHPT1-206ENST00000550385 GAS2L2Q8NHY3 880 aa13.95□□□□□ -0.18
CHPT1-206ENST00000550385 PLEKHG2Q9H7P9 1386 aa13.95□□□□□ -0.18
CHPT1-206ENST00000550385 LMO7Q8WWI1 1683 aa13.95□□□□□ -0.18
CHPT1-206ENST00000550385 TATP17735 454 aaPredicted RBP13.94□□□□□ -0.18
CHPT1-206ENST00000550385 RIPK4P57078 832 aa13.94□□□□□ -0.18
CHPT1-206ENST00000550385 NEUROD2Q15784 382 aa13.94□□□□□ -0.18
CHPT1-206ENST00000550385 USHBP1Q8N6Y0 703 aa13.94□□□□□ -0.18
CHPT1-206ENST00000550385 PHACTR3Q96KR7 559 aa13.94□□□□□ -0.18
CHPT1-206ENST00000550385 SALL2Q9Y467 1007 aaPredicted RBP13.94□□□□□ -0.18
CHPT1-206ENST00000550385 FAM208AQ9UK61 1670 aaKnown RBP13.94□□□□□ -0.18
CHPT1-206ENST00000550385 RGPD5Q99666 1765 aa13.94□□□□□ -0.18
CHPT1-206ENST00000550385 NCAPD2Q15021 1401 aa13.93□□□□□ -0.18
CHPT1-206ENST00000550385 LARP1Q6PKG0 1096 aaKnown RBP13.93□□□□□ -0.18
CHPT1-206ENST00000550385 FNBP4Q8N3X1 1017 aaPredicted RBP13.93□□□□□ -0.18
CHPT1-206ENST00000550385 C8orf37Q96NL8 207 aa13.93□□□□□ -0.18
CHPT1-206ENST00000550385 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.93□□□□□ -0.181e-9■□□□□ 9.2
CHPT1-206ENST00000550385 CRB1P82279 1406 aa13.92□□□□□ -0.18
CHPT1-206ENST00000550385 HTATSF1O43719 755 aaKnown RBP13.92□□□□□ -0.18
CHPT1-206ENST00000550385 CALD1Q05682 793 aaKnown RBP13.92□□□□□ -0.18
CHPT1-206ENST00000550385 UNC5CLQ8IV45 518 aa13.92□□□□□ -0.18
CHPT1-206ENST00000550385 WDR63Q8IWG1 891 aa13.92□□□□□ -0.18
CHPT1-206ENST00000550385 THRAP3Q9Y2W1 955 aaKnown RBP13.92□□□□□ -0.18
CHPT1-206ENST00000550385 WWC1Q8IX03 1113 aa13.91□□□□□ -0.18
CHPT1-206ENST00000550385 SPG7Q9UQ90 795 aa13.91□□□□□ -0.18
CHPT1-206ENST00000550385 RRP7AQ9Y3A4 280 aaKnown RBP13.91□□□□□ -0.18
CHPT1-206ENST00000550385 SLIT2O94813 1529 aa13.9□□□□□ -0.18
CHPT1-206ENST00000550385 IL2RBP14784 551 aa13.9□□□□□ -0.18
CHPT1-206ENST00000550385 GOLGA2Q08379 1002 aa13.9□□□□□ -0.18
CHPT1-206ENST00000550385 MTHFSDQ2M296 383 aaKnown RBP13.9□□□□□ -0.18
CHPT1-206ENST00000550385 RTF1Q92541 710 aaKnown RBP13.9□□□□□ -0.18
CHPT1-206ENST00000550385 CDCA7Q9BWT1 371 aaPredicted RBP13.9□□□□□ -0.18
CHPT1-206ENST00000550385 ZNF521Q96K83 1311 aa13.89□□□□□ -0.19
CHPT1-206ENST00000550385 NWD2Q9ULI1 1742 aa13.88□□□□□ -0.19
CHPT1-206ENST00000550385 SENP3-EIF4A1A0A087X0R7 540 aa13.88□□□□□ -0.19
CHPT1-206ENST00000550385 GNAT3A8MTJ3 354 aa13.88□□□□□ -0.19
CHPT1-206ENST00000550385 AKAP4Q5JQC9 854 aa13.88□□□□□ -0.19
CHPT1-206ENST00000550385 C1orf141Q5JVX7 400 aa13.88□□□□□ -0.19
CHPT1-206ENST00000550385 USP21Q9UK80 565 aa13.88□□□□□ -0.19
CHPT1-206ENST00000550385 TRIM35Q9UPQ4 493 aa13.88□□□□□ -0.19
CHPT1-206ENST00000550385 RGPD2P0DJD1 1756 aa13.87□□□□□ -0.19
CHPT1-206ENST00000550385 E9PSI1 815 aa13.87□□□□□ -0.19
CHPT1-206ENST00000550385 VPS72Q15906 364 aa13.87□□□□□ -0.19
CHPT1-206ENST00000550385 ZCRB1Q8TBF4 217 aaKnown RBP13.87□□□□□ -0.19
CHPT1-206ENST00000550385 USP35Q9P2H5 1018 aa13.87□□□□□ -0.19
CHPT1-206ENST00000550385 CCDC9Q9Y3X0 531 aaKnown RBP13.87□□□□□ -0.19
CHPT1-206ENST00000550385 IL16Q14005 1332 aa13.87□□□□□ -0.19
CHPT1-206ENST00000550385 SPATA31A1Q5TZJ5 1347 aa13.87□□□□□ -0.19
CHPT1-206ENST00000550385 LRP6O75581 1613 aa13.86□□□□□ -0.19
CHPT1-206ENST00000550385 HSP90AB1P08238 724 aaKnown RBP13.86□□□□□ -0.19
CHPT1-206ENST00000550385 ZNF530Q6P9A1 599 aaPredicted RBP13.86□□□□□ -0.19
CHPT1-206ENST00000550385 IFNL2Q8IZJ0 200 aa13.86□□□□□ -0.19
CHPT1-206ENST00000550385 SPATA31A5Q5VU36 1347 aa13.86□□□□□ -0.19
CHPT1-206ENST00000550385 SPATA31A7Q8IWB4 1347 aa13.86□□□□□ -0.19
CHPT1-206ENST00000550385 PLCH1Q4KWH8 1693 aa13.85□□□□□ -0.19
CHPT1-206ENST00000550385 BARGINQ6ZT62 677 aa13.85□□□□□ -0.19
CHPT1-206ENST00000550385 RBM42Q9BTD8 480 aaKnown RBP13.85□□□□□ -0.19
CHPT1-206ENST00000550385 MAP3K5Q99683 1374 aa13.84□□□□□ -0.19
CHPT1-206ENST00000550385 EXOC5O00471 708 aa13.84□□□□□ -0.19
CHPT1-206ENST00000550385 SLFN5Q08AF3 891 aa13.84□□□□□ -0.19
CHPT1-206ENST00000550385 MYH16Q9H6N6 1097 aa13.84□□□□□ -0.19
CHPT1-206ENST00000550385 TRPC5Q9UL62 973 aaPredicted RBP13.84□□□□□ -0.19
CHPT1-206ENST00000550385 BCL9LQ86UU0 1499 aa13.84□□□□□ -0.19
CHPT1-206ENST00000550385 AFF2P51816 1311 aa13.84□□□□□ -0.19
CHPT1-206ENST00000550385 OVOS2A0A0G2JMS6 1433 aa13.83□□□□□ -0.2
CHPT1-206ENST00000550385 GNAI1P63096 354 aa13.83□□□□□ -0.2
CHPT1-206ENST00000550385 PCDH11XQ9BZA7 1347 aa13.83□□□□□ -0.2
CHPT1-206ENST00000550385 PCDH11YQ9BZA8 1340 aa13.83□□□□□ -0.2
CHPT1-206ENST00000550385 NRAPQ86VF7 1730 aa13.82□□□□□ -0.2
CHPT1-206ENST00000550385 MEGF6O75095 1541 aa13.82□□□□□ -0.2
CHPT1-206ENST00000550385 PHKG2P15735 406 aa13.82□□□□□ -0.2
CHPT1-206ENST00000550385 ZNF772Q68DY9 489 aaPredicted RBP13.82□□□□□ -0.2
CHPT1-206ENST00000550385 TRMT2AQ8IZ69 625 aaKnown RBP13.82□□□□□ -0.2
CHPT1-206ENST00000550385 CDCA7LQ96GN5 454 aa13.82□□□□□ -0.2
CHPT1-206ENST00000550385 IFT57Q9NWB7 429 aa13.82□□□□□ -0.2
CHPT1-206ENST00000550385 MCM10Q7L590 875 aa13.81□□□□□ -0.2
CHPT1-206ENST00000550385 DCAF5Q96JK2 942 aa13.81□□□□□ -0.2
CHPT1-206ENST00000550385 CFAP44Q96MT7 982 aa13.81□□□□□ -0.2
CHPT1-206ENST00000550385 BABAM1Q9NWV8 329 aa13.81□□□□□ -0.2
CHPT1-206ENST00000550385 RNMTO43148 476 aaKnown RBP13.8□□□□□ -0.2
CHPT1-206ENST00000550385 DCTN1Q14203 1278 aa13.8□□□□□ -0.2
CHPT1-206ENST00000550385 IL17REQ8NFR9 667 aa13.8□□□□□ -0.2
CHPT1-206ENST00000550385 GJD4Q96KN9 370 aaPredicted RBP13.8□□□□□ -0.2
CHPT1-206ENST00000550385 QTRT2Q9H974 415 aaKnown RBP13.8□□□□□ -0.2
CHPT1-206ENST00000550385 PARP4Q9UKK3 1724 aaKnown RBP13.8□□□□□ -0.2
CHPT1-206ENST00000550385 TEFQ10587 303 aa13.79□□□□□ -0.2
CHPT1-206ENST00000550385 NKX1-1Q15270 411 aaPredicted RBP13.79□□□□□ -0.2
CHPT1-206ENST00000550385 TAF7Q15545 349 aaPredicted RBP13.79□□□□□ -0.2
CHPT1-206ENST00000550385 DDB1Q16531 1140 aa13.79□□□□□ -0.2
CHPT1-206ENST00000550385 DUSP27Q5VZP5 1158 aa13.79□□□□□ -0.2
CHPT1-206ENST00000550385 DDX54Q8TDD1 881 aaKnown RBP13.79□□□□□ -0.2
CHPT1-206ENST00000550385 LAS1LQ9Y4W2 734 aaKnown RBP13.79□□□□□ -0.2
CHPT1-206ENST00000550385 DISP2A7MBM2 1401 aa13.79□□□□□ -0.2
CHPT1-206ENST00000550385 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.78□□□□□ -0.2
CHPT1-206ENST00000550385 CYP27B1O15528 508 aa13.78□□□□□ -0.2
CHPT1-206ENST00000550385 ZNF853P0CG23 659 aa13.78□□□□□ -0.2
CHPT1-206ENST00000550385 MPRIPQ6WCQ1 1025 aa13.78□□□□□ -0.2
CHPT1-206ENST00000550385 DLG5Q8TDM6 1919 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms