RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 ZCRB1Q8TBF4 217 aaKnown RBP16.22■□□□□ 0.19
LETMD1-221ENST00000550100 EYA1Q99502 592 aa16.22■□□□□ 0.19
LETMD1-221ENST00000550100 EIF4A2Q14240 407 aaKnown RBP16.22■□□□□ 0.19
LETMD1-221ENST00000550100 PARD3Q8TEW0 1356 aa16.22■□□□□ 0.19
LETMD1-221ENST00000550100 MORC1Q86VD1 984 aa16.21■□□□□ 0.19
LETMD1-221ENST00000550100 KNSTRNQ9Y448 316 aa16.21■□□□□ 0.19
LETMD1-221ENST00000550100 NCAPD2Q15021 1401 aa16.2■□□□□ 0.18
LETMD1-221ENST00000550100 NHSQ6T4R5 1651 aa16.2■□□□□ 0.18
LETMD1-221ENST00000550100 ANO8Q9HCE9 1232 aaPredicted RBP16.2■□□□□ 0.18
LETMD1-221ENST00000550100 SMG6Q86US8 1419 aaKnown RBP16.2■□□□□ 0.18
LETMD1-221ENST00000550100 NSD2O96028 1365 aa16.18■□□□□ 0.18
LETMD1-221ENST00000550100 PRIM1P49642 420 aaKnown RBP16.18■□□□□ 0.18
LETMD1-221ENST00000550100 TXNRD1Q16881 649 aa16.18■□□□□ 0.18
LETMD1-221ENST00000550100 RAPGEF4Q8WZA2 1011 aa16.18■□□□□ 0.18
LETMD1-221ENST00000550100 CYP27B1O15528 508 aa16.17■□□□□ 0.18
LETMD1-221ENST00000550100 TATP17735 454 aaPredicted RBP16.17■□□□□ 0.18
LETMD1-221ENST00000550100 PDGFDQ9GZP0 370 aaPredicted RBP16.17■□□□□ 0.18
LETMD1-221ENST00000550100 BTAF1O14981 1849 aa16.17■□□□□ 0.18
LETMD1-221ENST00000550100 RGPD3A6NKT7 1758 aaPredicted RBP16.16■□□□□ 0.18
LETMD1-221ENST00000550100 RGPD4Q7Z3J3 1758 aa16.16■□□□□ 0.18
LETMD1-221ENST00000550100 CC2D1BQ5T0F9 858 aaKnown RBP16.16■□□□□ 0.18
LETMD1-221ENST00000550100 LRRC4BQ9NT99 713 aa16.16■□□□□ 0.18
LETMD1-221ENST00000550100 KCNQ4P56696 695 aa16.15■□□□□ 0.18
LETMD1-221ENST00000550100 CNGB1Q14028 1251 aaPredicted RBP16.15■□□□□ 0.18
LETMD1-221ENST00000550100 DOT1LQ8TEK3 1739 aa16.13■□□□□ 0.17
LETMD1-221ENST00000550100 AEBP1Q8IUX7 1158 aa16.13■□□□□ 0.17
LETMD1-221ENST00000550100 SYTL4Q96C24 671 aaPredicted RBP16.13■□□□□ 0.17
LETMD1-221ENST00000550100 IGSF1Q8N6C5 1336 aa16.13■□□□□ 0.17
LETMD1-221ENST00000550100 IL13P35225 146 aa16.12■□□□□ 0.17
LETMD1-221ENST00000550100 MTHFSP49914 203 aa16.12■□□□□ 0.17
LETMD1-221ENST00000550100 NBPF14Q5TI25 921 aa16.12■□□□□ 0.17
LETMD1-221ENST00000550100 PKD1L3Q7Z443 1732 aa16.12■□□□□ 0.17
LETMD1-221ENST00000550100 PCDH11XQ9BZA7 1347 aa16.1■□□□□ 0.17
LETMD1-221ENST00000550100 PCDH11YQ9BZA8 1340 aa16.1■□□□□ 0.17
LETMD1-221ENST00000550100 TOGARAM1Q9Y4F4 1720 aa16.1■□□□□ 0.17
LETMD1-221ENST00000550100 LRP5O75197 1615 aa16.09■□□□□ 0.17
LETMD1-221ENST00000550100 NKX1-1Q15270 411 aaPredicted RBP16.09■□□□□ 0.17
LETMD1-221ENST00000550100 ZNF827Q17R98 1081 aa16.09■□□□□ 0.17
LETMD1-221ENST00000550100 PAPPAQ13219 1627 aa16.08■□□□□ 0.16
LETMD1-221ENST00000550100 SLC15A2Q16348 729 aa16.08■□□□□ 0.16
LETMD1-221ENST00000550100 NPC1L1Q9UHC9 1359 aa16.07■□□□□ 0.16
LETMD1-221ENST00000550100 PHKG2P15735 406 aa16.07■□□□□ 0.16
LETMD1-221ENST00000550100 MPRIPQ6WCQ1 1025 aa16.07■□□□□ 0.16
LETMD1-221ENST00000550100 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.07■□□□□ 0.16
LETMD1-221ENST00000550100 SPG7Q9UQ90 795 aa16.07■□□□□ 0.16
LETMD1-221ENST00000550100 ITGB4P16144 1822 aa16.06■□□□□ 0.16
LETMD1-221ENST00000550100 SULT6B1Q6IMI4 303 aa16.06■□□□□ 0.16
LETMD1-221ENST00000550100 PIGBQ92521 554 aa16.06■□□□□ 0.16
LETMD1-221ENST00000550100 CASZ1Q86V15 1759 aa16.06■□□□□ 0.16
LETMD1-221ENST00000550100 AKT1S1Q96B36 256 aa16.05■□□□□ 0.16
LETMD1-221ENST00000550100 LY75O60449 1722 aa16.05■□□□□ 0.16
LETMD1-221ENST00000550100 STK32BQ9NY57 414 aa16.04■□□□□ 0.16
LETMD1-221ENST00000550100 ZBTB7AO95365 584 aa16.03■□□□□ 0.16
LETMD1-221ENST00000550100 IFNL2Q8IZJ0 200 aa16.03■□□□□ 0.16
LETMD1-221ENST00000550100 KDRP35968 1356 aa16.03■□□□□ 0.16
LETMD1-221ENST00000550100 COL3A1P02461 1466 aaPredicted RBP16.03■□□□□ 0.16
LETMD1-221ENST00000550100 HMOX1P09601 288 aa16.03■□□□□ 0.16
LETMD1-221ENST00000550100 SLC27A3Q5K4L6 730 aa16.03■□□□□ 0.16
LETMD1-221ENST00000550100 ASAP1Q9ULH1 1129 aa16.02■□□□□ 0.15
LETMD1-221ENST00000550100 PLEKHO1Q53GL0 409 aaPredicted RBP16.01■□□□□ 0.15
LETMD1-221ENST00000550100 CCNL1Q9UK58 526 aaPredicted RBP16.01■□□□□ 0.15
LETMD1-221ENST00000550100 ATF5Q9Y2D1 282 aaPredicted RBP16.01■□□□□ 0.15
LETMD1-221ENST00000550100 KDM6AO15550 1401 aaPredicted RBP16■□□□□ 0.15
LETMD1-221ENST00000550100 PTGER2P43116 358 aa16■□□□□ 0.15
LETMD1-221ENST00000550100 ZNF530Q6P9A1 599 aaPredicted RBP16■□□□□ 0.15
LETMD1-221ENST00000550100 SPON1Q9HCB6 807 aa16■□□□□ 0.15
LETMD1-221ENST00000550100 DIAPH1O60610 1272 aaKnown RBP15.99■□□□□ 0.15
LETMD1-221ENST00000550100 SMIM5Q71RC9 77 aa15.99■□□□□ 0.15
LETMD1-221ENST00000550100 AMIGO3Q86WK7 504 aa15.99■□□□□ 0.15
LETMD1-221ENST00000550100 TUBGCP6Q96RT7 1819 aa15.99■□□□□ 0.15
LETMD1-221ENST00000550100 PALLDQ8WX93 1383 aa15.99■□□□□ 0.15
LETMD1-221ENST00000550100 PNPLA7Q6ZV29 1317 aa15.99■□□□□ 0.15
LETMD1-221ENST00000550100 PPP2R1AP30153 589 aa15.98■□□□□ 0.15
LETMD1-221ENST00000550100 ATG3Q9NT62 314 aa15.98■□□□□ 0.15
LETMD1-221ENST00000550100 AMOTQ4VCS5 1084 aa15.97■□□□□ 0.15
LETMD1-221ENST00000550100 SGIP1Q9BQI5 828 aa15.97■□□□□ 0.15
LETMD1-221ENST00000550100 PLEKHG2Q9H7P9 1386 aa15.97■□□□□ 0.15
LETMD1-221ENST00000550100 SLC4A9Q96Q91 983 aa15.97■□□□□ 0.15
LETMD1-221ENST00000550100 TMOD3Q9NYL9 352 aa15.97■□□□□ 0.15
LETMD1-221ENST00000550100 ITPK1Q13572 414 aa15.96■□□□□ 0.14
LETMD1-221ENST00000550100 DCAF5Q96JK2 942 aa15.96■□□□□ 0.14
LETMD1-221ENST00000550100 LGR6Q9HBX8 967 aa15.96■□□□□ 0.14
LETMD1-221ENST00000550100 TFCP2L1Q9NZI6 479 aa15.96■□□□□ 0.14
LETMD1-221ENST00000550100 TAF1LQ8IZX4 1826 aa15.96■□□□□ 0.14
LETMD1-221ENST00000550100 ERVV-2B6SEH9 535 aa15.95■□□□□ 0.14
LETMD1-221ENST00000550100 MTHFSDQ2M296 383 aaKnown RBP15.95■□□□□ 0.14
LETMD1-221ENST00000550100 LOC102724428A0A0B4J2F2 783 aa15.94■□□□□ 0.14
LETMD1-221ENST00000550100 SIK1P57059 783 aa15.94■□□□□ 0.14
LETMD1-221ENST00000550100 COL23A1Q86Y22 540 aaPredicted RBP15.94■□□□□ 0.14
LETMD1-221ENST00000550100 LINC00116Q8NCU8 138 aa15.94■□□□□ 0.14
LETMD1-221ENST00000550100 SMARCC1Q92922 1105 aaPredicted RBP15.94■□□□□ 0.14
LETMD1-221ENST00000550100 U2SURPO15042 1029 aaKnown RBP15.93■□□□□ 0.14
LETMD1-221ENST00000550100 NFATC2IPQ8NCF5 419 aa15.93■□□□□ 0.14
LETMD1-221ENST00000550100 MTFR1LQ9H019 292 aa15.93■□□□□ 0.14
LETMD1-221ENST00000550100 C5P01031 1676 aa15.93■□□□□ 0.14
LETMD1-221ENST00000550100 DDX10Q13206 875 aaKnown RBP15.92■□□□□ 0.14
LETMD1-221ENST00000550100 PHACTR3Q96KR7 559 aa15.92■□□□□ 0.14
LETMD1-221ENST00000550100 QSER1Q2KHR3 1735 aa15.92■□□□□ 0.14
LETMD1-221ENST00000550100 HSP90AB1P08238 724 aaKnown RBP15.91■□□□□ 0.14
LETMD1-221ENST00000550100 CABP4P57796 275 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms