RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 CRB1P82279 1406 aa24.47■■□□□ 1.51
BRF1-215ENST00000549655 STRCQ7RTU9 1775 aa24.46■■□□□ 1.51
BRF1-215ENST00000549655 ARHGEF25Q86VW2 580 aa24.45■■□□□ 1.51
BRF1-215ENST00000549655 MRPL50Q8N5N7 158 aaKnown RBP24.45■■□□□ 1.51
BRF1-215ENST00000549655 USHBP1Q8N6Y0 703 aa24.45■■□□□ 1.5
BRF1-215ENST00000549655 MSH6P52701 1360 aa24.45■■□□□ 1.5
BRF1-215ENST00000549655 PCDHB15Q9Y5E8 787 aa24.44■■□□□ 1.5
BRF1-215ENST00000549655 ITPRIPQ8IWB1 547 aa24.43■■□□□ 1.5
BRF1-215ENST00000549655 HTATSF1O43719 755 aaKnown RBP24.43■■□□□ 1.5
BRF1-215ENST00000549655 NBPF6Q5VWK0 638 aa24.43■■□□□ 1.5
BRF1-215ENST00000549655 NBPF4Q96M43 638 aa24.43■■□□□ 1.5
BRF1-215ENST00000549655 TMEM57Q8N5G2 664 aa24.42■■□□□ 1.5
BRF1-215ENST00000549655 DDX17Q92841 729 aaKnown RBP24.42■■□□□ 1.5
BRF1-215ENST00000549655 DDX19BQ9UMR2 479 aa24.42■■□□□ 1.5
BRF1-215ENST00000549655 ALS2Q96Q42 1657 aa24.42■■□□□ 1.5
BRF1-215ENST00000549655 GNAT3A8MTJ3 354 aa24.41■■□□□ 1.5
BRF1-215ENST00000549655 ARHGAP45Q92619 1136 aa24.41■■□□□ 1.5
BRF1-215ENST00000549655 XIRP1Q702N8 1843 aaKnown RBP24.4■■□□□ 1.5
BRF1-215ENST00000549655 KIAA0232Q92628 1395 aa24.4■■□□□ 1.5
BRF1-215ENST00000549655 KRT24Q2M2I5 525 aa24.39■■□□□ 1.49
BRF1-215ENST00000549655 NPHP3Q7Z494 1330 aa24.39■■□□□ 1.49
BRF1-215ENST00000549655 HAP1P54257 671 aaPredicted RBP24.38■■□□□ 1.49
BRF1-215ENST00000549655 MIS18AQ9NYP9 233 aa24.38■■□□□ 1.49
BRF1-215ENST00000549655 MAP3K5Q99683 1374 aa24.38■■□□□ 1.49
BRF1-215ENST00000549655 LRRC59Q96AG4 307 aaKnown RBP24.38■■□□□ 1.49
BRF1-215ENST00000549655 RGPD2P0DJD1 1756 aa24.37■■□□□ 1.49
BRF1-215ENST00000549655 TSPYL4Q9UJ04 414 aa24.37■■□□□ 1.49
BRF1-215ENST00000549655 PDE4AP27815 886 aa24.36■■□□□ 1.49
BRF1-215ENST00000549655 MED1Q15648 1581 aaPredicted RBP24.36■■□□□ 1.49
BRF1-215ENST00000549655 RWDD1Q9H446 243 aaPredicted RBP24.36■■□□□ 1.49
BRF1-215ENST00000549655 ANKRD24Q8TF21 1146 aa24.35■■□□□ 1.49
BRF1-215ENST00000549655 LRRC37A3O60309 1634 aa24.35■■□□□ 1.49
BRF1-215ENST00000549655 ZNF335Q9H4Z2 1342 aaPredicted RBP24.35■■□□□ 1.49
BRF1-215ENST00000549655 AXIN2Q9Y2T1 843 aa24.34■■□□□ 1.49
BRF1-215ENST00000549655 IL17REQ8NFR9 667 aa24.34■■□□□ 1.49
BRF1-215ENST00000549655 BACH2Q9BYV9 841 aa24.34■■□□□ 1.49
BRF1-215ENST00000549655 RGS3P49796 1198 aa24.33■■□□□ 1.49
BRF1-215ENST00000549655 ZC3H6P61129 1189 aaKnown RBP24.33■■□□□ 1.49
BRF1-215ENST00000549655 ZBTB40Q9NUA8 1239 aa24.33■■□□□ 1.49
BRF1-215ENST00000549655 API5Q9BZZ5 524 aaKnown RBP24.31■■□□□ 1.48
BRF1-215ENST00000549655 TNS3Q68CZ2 1445 aa24.31■■□□□ 1.48
BRF1-215ENST00000549655 PXDNQ92626 1479 aa24.31■■□□□ 1.48
BRF1-215ENST00000549655 ABCC4O15439 1325 aa24.31■■□□□ 1.48
BRF1-215ENST00000549655 NCAPD2Q15021 1401 aa24.31■■□□□ 1.48
BRF1-215ENST00000549655 BRINP3Q76B58 766 aa24.29■■□□□ 1.48
BRF1-215ENST00000549655 RGPD5Q99666 1765 aa24.29■■□□□ 1.48
BRF1-215ENST00000549655 SPATA31A3Q5VYP0 1347 aa24.28■■□□□ 1.48
BRF1-215ENST00000549655 TAF7Q15545 349 aaPredicted RBP24.28■■□□□ 1.48
BRF1-215ENST00000549655 HDAC1Q13547 482 aaPredicted RBP24.27■■□□□ 1.48
BRF1-215ENST00000549655 PLEKHO1Q53GL0 409 aaPredicted RBP24.27■■□□□ 1.48
BRF1-215ENST00000549655 ZBTB7BO15156 539 aaPredicted RBP24.27■■□□□ 1.48
BRF1-215ENST00000549655 CABLES1Q8TDN4 633 aa24.27■■□□□ 1.48
BRF1-215ENST00000549655 CHMP4BQ9H444 224 aaKnown RBP24.27■■□□□ 1.48
BRF1-215ENST00000549655 BABAM1Q9NWV8 329 aa24.27■■□□□ 1.48
BRF1-215ENST00000549655 ERBB3P21860 1342 aa24.26■■□□□ 1.47
BRF1-215ENST00000549655 CAMTA1Q9Y6Y1 1673 aa24.26■■□□□ 1.47
BRF1-215ENST00000549655 AMOTQ4VCS5 1084 aa24.26■■□□□ 1.47
BRF1-215ENST00000549655 CEMIPQ8WUJ3 1361 aa24.26■■□□□ 1.47
BRF1-215ENST00000549655 SLAIN2Q9P270 581 aa24.25■■□□□ 1.47
BRF1-215ENST00000549655 ZNF530Q6P9A1 599 aaPredicted RBP24.25■■□□□ 1.47
BRF1-215ENST00000549655 AKAP4Q5JQC9 854 aa24.23■■□□□ 1.47
BRF1-215ENST00000549655 PDZRN3Q9UPQ7 1066 aa24.23■■□□□ 1.47
BRF1-215ENST00000549655 SLC4A2P04920 1241 aa24.23■■□□□ 1.47
BRF1-215ENST00000549655 LGR6Q9HBX8 967 aa24.23■■□□□ 1.47
BRF1-215ENST00000549655 LMO7Q8WWI1 1683 aa24.22■■□□□ 1.47
BRF1-215ENST00000549655 PTPRCP08575 1304 aa24.22■■□□□ 1.47
BRF1-215ENST00000549655 FAM161AQ3B820 660 aa24.21■■□□□ 1.47
BRF1-215ENST00000549655 RGS12O14924 1447 aa24.21■■□□□ 1.47
BRF1-215ENST00000549655 COL18A1P39060 1754 aa24.21■■□□□ 1.47
BRF1-215ENST00000549655 CRYBG1Q9Y4K1 1723 aa24.2■■□□□ 1.46
BRF1-215ENST00000549655 C1orf141Q5JVX7 400 aa24.2■■□□□ 1.46
BRF1-215ENST00000549655 INTS3Q68E01 1043 aaKnown RBP24.19■■□□□ 1.46
BRF1-215ENST00000549655 SOS1Q07889 1333 aaPredicted RBP24.18■■□□□ 1.46
BRF1-215ENST00000549655 ANP32AP39687 249 aaKnown RBP24.18■■□□□ 1.46
BRF1-215ENST00000549655 CHRNA2Q15822 529 aa24.18■■□□□ 1.46
BRF1-215ENST00000549655 C8orf34Q49A92 452 aa24.18■■□□□ 1.46
BRF1-215ENST00000549655 NLRP2Q9NX02 1062 aa24.18■■□□□ 1.46
BRF1-215ENST00000549655 MPRIPQ6WCQ1 1025 aa24.18■■□□□ 1.46
BRF1-215ENST00000549655 SOS2Q07890 1332 aaPredicted RBP24.17■■□□□ 1.46
BRF1-215ENST00000549655 MSH5O43196 834 aa24.17■■□□□ 1.46
BRF1-215ENST00000549655 CCDC30Q5VVM6 783 aa24.17■■□□□ 1.46
BRF1-215ENST00000549655 STK31Q9BXU1 1019 aa24.17■■□□□ 1.46
BRF1-215ENST00000549655 SMC5Q8IY18 1101 aa24.16■■□□□ 1.46
BRF1-215ENST00000549655 C1orf115Q9H7X2 142 aa24.16■■□□□ 1.46
BRF1-215ENST00000549655 CPDO75976 1380 aa24.16■■□□□ 1.46
BRF1-215ENST00000549655 ABCC6O95255 1503 aa24.16■■□□□ 1.46
BRF1-215ENST00000549655 TEFQ10587 303 aa24.16■■□□□ 1.46
BRF1-215ENST00000549655 RNMTO43148 476 aaKnown RBP24.15■■□□□ 1.46
BRF1-215ENST00000549655 G2E3Q7L622 706 aa24.15■■□□□ 1.46
BRF1-215ENST00000549655 CSB-PGBD3P0DP91 1061 aa24.14■■□□□ 1.46
BRF1-215ENST00000549655 RAPGEF4Q8WZA2 1011 aa24.14■■□□□ 1.46
BRF1-215ENST00000549655 NPM2Q86SE8 214 aaKnown RBP24.13■■□□□ 1.45
BRF1-215ENST00000549655 NECTIN2Q92692 538 aa24.13■■□□□ 1.45
BRF1-215ENST00000549655 FAM208AQ9UK61 1670 aaKnown RBP24.13■■□□□ 1.45
BRF1-215ENST00000549655 OVOS2A0A0G2JMS6 1433 aa24.12■■□□□ 1.45
BRF1-215ENST00000549655 KDM3BQ7LBC6 1761 aa24.12■■□□□ 1.45
BRF1-215ENST00000549655 VIRMAQ69YN4 1812 aaKnown RBP24.12■■□□□ 1.45
BRF1-215ENST00000549655 BTBD11A6QL63 1104 aa24.11■■□□□ 1.45
BRF1-215ENST00000549655 EIF4A1P60842 406 aaKnown RBP24.11■■□□□ 1.45
BRF1-215ENST00000549655 CACNA1FO60840 1977 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms