RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 FANCIQ9NVI1 1328 aa17.73■□□□□ 0.43
CALCOCO1-214ENST00000549613 COL22A1Q8NFW1 1626 aaPredicted RBP17.73■□□□□ 0.43
CALCOCO1-214ENST00000549613 ABCA3Q99758 1704 aa17.73■□□□□ 0.43
CALCOCO1-214ENST00000549613 RRP1P56182 461 aaKnown RBP17.73■□□□□ 0.43
CALCOCO1-214ENST00000549613 RAPGEF4Q8WZA2 1011 aa17.73■□□□□ 0.43
CALCOCO1-214ENST00000549613 CAMTA1Q9Y6Y1 1673 aa17.73■□□□□ 0.43
CALCOCO1-214ENST00000549613 RGPD2P0DJD1 1756 aa17.72■□□□□ 0.43
CALCOCO1-214ENST00000549613 FAM83GA6ND36 823 aa17.72■□□□□ 0.43
CALCOCO1-214ENST00000549613 ZNF853P0CG23 659 aa17.72■□□□□ 0.43
CALCOCO1-214ENST00000549613 EVA1CP58658 441 aa17.72■□□□□ 0.43
CALCOCO1-214ENST00000549613 THUMPD2Q9BTF0 503 aaKnown RBP17.72■□□□□ 0.43
CALCOCO1-214ENST00000549613 LAS1LQ9Y4W2 734 aaKnown RBP17.72■□□□□ 0.43
CALCOCO1-214ENST00000549613 WDR17Q8IZU2 1322 aa17.72■□□□□ 0.43
CALCOCO1-214ENST00000549613 TATP17735 454 aaPredicted RBP17.71■□□□□ 0.43
CALCOCO1-214ENST00000549613 TSR2Q969E8 191 aaKnown RBP17.71■□□□□ 0.43
CALCOCO1-214ENST00000549613 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.71■□□□□ 0.436e-7■■■■□ 21.9
CALCOCO1-214ENST00000549613 LMO7Q8WWI1 1683 aa17.71■□□□□ 0.42
CALCOCO1-214ENST00000549613 MAP3K5Q99683 1374 aa17.7■□□□□ 0.42
CALCOCO1-214ENST00000549613 COL16A1Q07092 1604 aaPredicted RBP17.7■□□□□ 0.42
CALCOCO1-214ENST00000549613 EXOSC9Q06265 439 aaKnown RBP17.7■□□□□ 0.42
CALCOCO1-214ENST00000549613 DCTN1Q14203 1278 aa17.7■□□□□ 0.42
CALCOCO1-214ENST00000549613 AKAP4Q5JQC9 854 aa17.7■□□□□ 0.42
CALCOCO1-214ENST00000549613 C1orf141Q5JVX7 400 aa17.69■□□□□ 0.42
CALCOCO1-214ENST00000549613 ZNF530Q6P9A1 599 aaPredicted RBP17.69■□□□□ 0.42
CALCOCO1-214ENST00000549613 TOM1L2Q6ZVM7 507 aa17.69■□□□□ 0.42
CALCOCO1-214ENST00000549613 MCM10Q7L590 875 aa17.69■□□□□ 0.42
CALCOCO1-214ENST00000549613 ZNF428Q96B54 188 aa17.69■□□□□ 0.42
CALCOCO1-214ENST00000549613 SPG7Q9UQ90 795 aa17.69■□□□□ 0.42
CALCOCO1-214ENST00000549613 CHL1O00533 1208 aa17.68■□□□□ 0.42
CALCOCO1-214ENST00000549613 CARD10Q9BWT7 1032 aa17.68■□□□□ 0.42
CALCOCO1-214ENST00000549613 BABAM1Q9NWV8 329 aa17.68■□□□□ 0.42
CALCOCO1-214ENST00000549613 IRX6P78412 446 aaPredicted RBP17.67■□□□□ 0.42
CALCOCO1-214ENST00000549613 MBIPQ9NS73 344 aa17.67■□□□□ 0.42
CALCOCO1-214ENST00000549613 COL5A2P05997 1499 aaPredicted RBP17.67■□□□□ 0.42
CALCOCO1-214ENST00000549613 CRB1P82279 1406 aa17.66■□□□□ 0.42
CALCOCO1-214ENST00000549613 RARSP54136 660 aaKnown RBP17.66■□□□□ 0.42
CALCOCO1-214ENST00000549613 COL14A1Q05707 1796 aaKnown RBP17.66■□□□□ 0.42
CALCOCO1-214ENST00000549613 STRN4Q9NRL3 753 aa17.65■□□□□ 0.42
CALCOCO1-214ENST00000549613 TAF7Q15545 349 aaPredicted RBP17.64■□□□□ 0.41
CALCOCO1-214ENST00000549613 IL17REQ8NFR9 667 aa17.64■□□□□ 0.41
CALCOCO1-214ENST00000549613 BTG4Q9NY30 223 aa17.64■□□□□ 0.41
CALCOCO1-214ENST00000549613 ALDH1L2Q3SY69 923 aa17.63■□□□□ 0.41
CALCOCO1-214ENST00000549613 JCADQ9P266 1359 aa17.63■□□□□ 0.41
CALCOCO1-214ENST00000549613 BCAR3O75815 825 aa17.62■□□□□ 0.41
CALCOCO1-214ENST00000549613 HSP90AB1P08238 724 aaKnown RBP17.62■□□□□ 0.41
CALCOCO1-214ENST00000549613 PPP4R2Q9NY27 417 aa17.62■□□□□ 0.41
CALCOCO1-214ENST00000549613 TSPYL4Q9UJ04 414 aa17.62■□□□□ 0.41
CALCOCO1-214ENST00000549613 RNMTO43148 476 aaKnown RBP17.61■□□□□ 0.41
CALCOCO1-214ENST00000549613 IL2RBP14784 551 aa17.61■□□□□ 0.41
CALCOCO1-214ENST00000549613 CANXP27824 592 aaKnown RBP17.61■□□□□ 0.41
CALCOCO1-214ENST00000549613 LARP1Q6PKG0 1096 aaKnown RBP17.61■□□□□ 0.41
CALCOCO1-214ENST00000549613 IFNL2Q8IZJ0 200 aa17.61■□□□□ 0.41
CALCOCO1-214ENST00000549613 CEMIPQ8WUJ3 1361 aa17.61■□□□□ 0.41
CALCOCO1-214ENST00000549613 OVOS2A0A0G2JMS6 1433 aa17.61■□□□□ 0.41
CALCOCO1-214ENST00000549613 NUTM2BA6NNL0 878 aaPredicted RBP17.6■□□□□ 0.41
CALCOCO1-214ENST00000549613 NUTM2EB1AL46 878 aaPredicted RBP17.6■□□□□ 0.41
CALCOCO1-214ENST00000549613 PLIN1O60240 522 aa17.6■□□□□ 0.41
CALCOCO1-214ENST00000549613 VAMP4O75379 141 aa17.6■□□□□ 0.41
CALCOCO1-214ENST00000549613 ADAMTS2O95450 1211 aa17.6■□□□□ 0.41
CALCOCO1-214ENST00000549613 MS4A1P11836 297 aa17.6■□□□□ 0.41
CALCOCO1-214ENST00000549613 TEFQ10587 303 aa17.6■□□□□ 0.41
CALCOCO1-214ENST00000549613 TWISTNBQ3B726 338 aaPredicted RBP17.6■□□□□ 0.41
CALCOCO1-214ENST00000549613 NUTM2AQ8IVF1 878 aaPredicted RBP17.6■□□□□ 0.41
CALCOCO1-214ENST00000549613 PDE3AQ14432 1141 aa17.59■□□□□ 0.41
CALCOCO1-214ENST00000549613 MPRIPQ6WCQ1 1025 aa17.59■□□□□ 0.41
CALCOCO1-214ENST00000549613 ZCRB1Q8TBF4 217 aaKnown RBP17.59■□□□□ 0.41
CALCOCO1-214ENST00000549613 LGR6Q9HBX8 967 aa17.59■□□□□ 0.41
CALCOCO1-214ENST00000549613 SMC4Q9NTJ3 1288 aa17.59■□□□□ 0.41
CALCOCO1-214ENST00000549613 MEGF6O75095 1541 aa17.58■□□□□ 0.41
CALCOCO1-214ENST00000549613 SOS1Q07889 1333 aaPredicted RBP17.58■□□□□ 0.4
CALCOCO1-214ENST00000549613 PHKG2P15735 406 aa17.58■□□□□ 0.4
CALCOCO1-214ENST00000549613 C8orf58Q8NAV2 365 aa17.58■□□□□ 0.4
CALCOCO1-214ENST00000549613 LRRC37A3O60309 1634 aa17.58■□□□□ 0.4
CALCOCO1-214ENST00000549613 SPATA31A6Q5VVP1 1343 aa17.57■□□□□ 0.4
CALCOCO1-214ENST00000549613 IPO8O15397 1037 aaKnown RBP17.57■□□□□ 0.4
CALCOCO1-214ENST00000549613 BRPF1P55201 1214 aaPredicted RBP17.57■□□□□ 0.4
CALCOCO1-214ENST00000549613 SSH1Q8WYL5 1049 aa17.57■□□□□ 0.4
CALCOCO1-214ENST00000549613 CHMP4AQ9BY43 222 aa17.57■□□□□ 0.4
CALCOCO1-214ENST00000549613 PARP4Q9UKK3 1724 aaKnown RBP17.56■□□□□ 0.4
CALCOCO1-214ENST00000549613 ZKSCAN2Q63HK3 967 aa17.56■□□□□ 0.4
CALCOCO1-214ENST00000549613 TSPYL6Q8N831 410 aa17.56■□□□□ 0.4
CALCOCO1-214ENST00000549613 FRAT1Q92837 279 aaPredicted RBP17.56■□□□□ 0.4
CALCOCO1-214ENST00000549613 DCAF5Q96JK2 942 aa17.56■□□□□ 0.4
CALCOCO1-214ENST00000549613 MIS18AQ9NYP9 233 aa17.56■□□□□ 0.4
CALCOCO1-214ENST00000549613 SRCAPQ6ZRS2 3230 aa17.56■□□□□ 0.4
CALCOCO1-214ENST00000549613 KIF16BQ96L93 1317 aa17.55■□□□□ 0.4
CALCOCO1-214ENST00000549613 PCDH11XQ9BZA7 1347 aa17.55■□□□□ 0.4
CALCOCO1-214ENST00000549613 PCDH11YQ9BZA8 1340 aa17.55■□□□□ 0.4
CALCOCO1-214ENST00000549613 ELL2O00472 640 aaPredicted RBP17.55■□□□□ 0.4
CALCOCO1-214ENST00000549613 ZNF772Q68DY9 489 aaPredicted RBP17.55■□□□□ 0.4
CALCOCO1-214ENST00000549613 CDCA7Q9BWT1 371 aaPredicted RBP17.55■□□□□ 0.4
CALCOCO1-214ENST00000549613 PKD1L3Q7Z443 1732 aa17.55■□□□□ 0.4
CALCOCO1-214ENST00000549613 BCL2L13Q9BXK5 485 aa17.54■□□□□ 0.4
CALCOCO1-214ENST00000549613 BTBD11A6QL63 1104 aa17.53■□□□□ 0.4
CALCOCO1-214ENST00000549613 CYP27B1O15528 508 aa17.53■□□□□ 0.4
CALCOCO1-214ENST00000549613 EXOC6Q8TAG9 804 aa17.53■□□□□ 0.4
CALCOCO1-214ENST00000549613 CRBNQ96SW2 442 aa17.53■□□□□ 0.4
CALCOCO1-214ENST00000549613 THRAP3Q9Y2W1 955 aaKnown RBP17.53■□□□□ 0.4
CALCOCO1-214ENST00000549613 MRPL50Q8N5N7 158 aaKnown RBP17.52■□□□□ 0.4
CALCOCO1-214ENST00000549613 ARHGAP45Q92619 1136 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms