RNA–Protein interactions for RNA: ENST00000549282.5

ERBB3-209, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-209ENST00000549282 TERF2IPQ9NYB0 399 aa20.53■□□□□ 0.88
ERBB3-209ENST00000549282 ANKRD36BQ8N2N9 1353 aa20.53■□□□□ 0.88
ERBB3-209ENST00000549282 EDC4Q6P2E9 1401 aaKnown RBP20.53■□□□□ 0.88
ERBB3-209ENST00000549282 SHANK3Q9BYB0 1731 aa20.51■□□□□ 0.87
ERBB3-209ENST00000549282 MSH5O43196 834 aa20.51■□□□□ 0.87
ERBB3-209ENST00000549282 COL23A1Q86Y22 540 aaPredicted RBP20.51■□□□□ 0.87
ERBB3-209ENST00000549282 ZCRB1Q8TBF4 217 aaKnown RBP20.51■□□□□ 0.87
ERBB3-209ENST00000549282 CCNL1Q9UK58 526 aaPredicted RBP20.51■□□□□ 0.87
ERBB3-209ENST00000549282 CARD11Q9BXL7 1154 aa20.5■□□□□ 0.87
ERBB3-209ENST00000549282 LY75O60449 1722 aa20.5■□□□□ 0.87
ERBB3-209ENST00000549282 NSD2O96028 1365 aa20.49■□□□□ 0.87
ERBB3-209ENST00000549282 A0A1W2PP64 1363 aa20.48■□□□□ 0.87
ERBB3-209ENST00000549282 FBLN1P23142 703 aa20.48■□□□□ 0.87
ERBB3-209ENST00000549282 HOXC9P31274 260 aa20.47■□□□□ 0.87
ERBB3-209ENST00000549282 FAM208AQ9UK61 1670 aaKnown RBP20.46■□□□□ 0.87
ERBB3-209ENST00000549282 AMPHP49418 695 aa20.46■□□□□ 0.87
ERBB3-209ENST00000549282 PUS7Q96PZ0 661 aaKnown RBP20.46■□□□□ 0.87
ERBB3-209ENST00000549282 DOT1LQ8TEK3 1739 aa20.46■□□□□ 0.87
ERBB3-209ENST00000549282 MAP3K19Q56UN5 1328 aa20.46■□□□□ 0.87
ERBB3-209ENST00000549282 MSL1Q68DK7 614 aa20.45■□□□□ 0.86
ERBB3-209ENST00000549282 COG3Q96JB2 828 aa20.45■□□□□ 0.86
ERBB3-209ENST00000549282 USP47Q96K76 1375 aa20.45■□□□□ 0.86
ERBB3-209ENST00000549282 RGPD2P0DJD1 1756 aa20.44■□□□□ 0.86
ERBB3-209ENST00000549282 CD2APQ9Y5K6 639 aa20.43■□□□□ 0.86
ERBB3-209ENST00000549282 ATP10DQ9P241 1426 aa20.43■□□□□ 0.86
ERBB3-209ENST00000549282 NBPF6Q5VWK0 638 aa20.42■□□□□ 0.86
ERBB3-209ENST00000549282 NBPF4Q96M43 638 aa20.42■□□□□ 0.86
ERBB3-209ENST00000549282 MEGF6O75095 1541 aa20.42■□□□□ 0.86
ERBB3-209ENST00000549282 GPBP1L1Q9HC44 474 aaPredicted RBP20.41■□□□□ 0.86
ERBB3-209ENST00000549282 FLAD1Q8NFF5 587 aa20.4■□□□□ 0.86
ERBB3-209ENST00000549282 CGNL1Q0VF96 1302 aa20.39■□□□□ 0.85
ERBB3-209ENST00000549282 USHBP1Q8N6Y0 703 aa20.39■□□□□ 0.85
ERBB3-209ENST00000549282 HMGB2P26583 209 aaKnown RBP20.38■□□□□ 0.85
ERBB3-209ENST00000549282 RRS1Q15050 365 aaKnown RBP20.37■□□□□ 0.85
ERBB3-209ENST00000549282 RAPGEF4Q8WZA2 1011 aa20.37■□□□□ 0.85
ERBB3-209ENST00000549282 HSPA6P17066 643 aa20.35■□□□□ 0.85
ERBB3-209ENST00000549282 TATP17735 454 aaPredicted RBP20.35■□□□□ 0.85
ERBB3-209ENST00000549282 MPRIPQ6WCQ1 1025 aa20.35■□□□□ 0.85
ERBB3-209ENST00000549282 ZNF526Q8TF50 670 aaPredicted RBP20.35■□□□□ 0.85
ERBB3-209ENST00000549282 TESK2Q96S53 571 aa20.34■□□□□ 0.85
ERBB3-209ENST00000549282 C5P01031 1676 aa20.34■□□□□ 0.85
ERBB3-209ENST00000549282 PALLDQ8WX93 1383 aa20.34■□□□□ 0.85
ERBB3-209ENST00000549282 RTL1A6NKG5 1358 aa20.33■□□□□ 0.84
ERBB3-209ENST00000549282 ADCY9O60503 1353 aa20.33■□□□□ 0.84
ERBB3-209ENST00000549282 TAF1LQ8IZX4 1826 aa20.32■□□□□ 0.84
ERBB3-209ENST00000549282 ST20-MTHFSA0A0A6YYL1 179 aa20.32■□□□□ 0.84
ERBB3-209ENST00000549282 FYB1O15117 783 aa20.32■□□□□ 0.84
ERBB3-209ENST00000549282 PCDH11XQ9BZA7 1347 aa20.31■□□□□ 0.84
ERBB3-209ENST00000549282 PCDH11YQ9BZA8 1340 aa20.31■□□□□ 0.84
ERBB3-209ENST00000549282 AMIGO3Q86WK7 504 aa20.31■□□□□ 0.84
ERBB3-209ENST00000549282 AK7Q96M32 723 aa20.31■□□□□ 0.84
ERBB3-209ENST00000549282 GGNBP2Q9H3C7 697 aa20.31■□□□□ 0.84
ERBB3-209ENST00000549282 CYP27B1O15528 508 aa20.3■□□□□ 0.84
ERBB3-209ENST00000549282 HSP90AB2PQ58FF8 381 aa20.3■□□□□ 0.84
ERBB3-209ENST00000549282 SMIM5Q71RC9 77 aa20.3■□□□□ 0.84
ERBB3-209ENST00000549282 SMARCC1Q92922 1105 aaPredicted RBP20.3■□□□□ 0.84
ERBB3-209ENST00000549282 WWC3Q9ULE0 1092 aa20.3■□□□□ 0.84
ERBB3-209ENST00000549282 IGSF1Q8N6C5 1336 aa20.29■□□□□ 0.84
ERBB3-209ENST00000549282 SMG6Q86US8 1419 aaKnown RBP20.29■□□□□ 0.84
ERBB3-209ENST00000549282 SLC24A1O60721 1099 aa20.29■□□□□ 0.84
ERBB3-209ENST00000549282 PHF14O94880 888 aa20.28■□□□□ 0.84
ERBB3-209ENST00000549282 INSRP06213 1382 aa20.27■□□□□ 0.84
ERBB3-209ENST00000549282 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.27■□□□□ 0.84
ERBB3-209ENST00000549282 C4BP0C0L5 1744 aa20.27■□□□□ 0.83
ERBB3-209ENST00000549282 ITGB4P16144 1822 aa20.26■□□□□ 0.83
ERBB3-209ENST00000549282 PIGBQ92521 554 aa20.26■□□□□ 0.83
ERBB3-209ENST00000549282 UBR3Q6ZT12 1888 aa20.24■□□□□ 0.83
ERBB3-209ENST00000549282 TONSLQ96HA7 1378 aa20.24■□□□□ 0.83
ERBB3-209ENST00000549282 KIF3CO14782 793 aa20.24■□□□□ 0.83
ERBB3-209ENST00000549282 SSFA2P28290 1259 aa20.23■□□□□ 0.83
ERBB3-209ENST00000549282 TOGARAM1Q9Y4F4 1720 aa20.22■□□□□ 0.83
ERBB3-209ENST00000549282 NKX1-1Q15270 411 aaPredicted RBP20.22■□□□□ 0.83
ERBB3-209ENST00000549282 LINC00116Q8NCU8 138 aa20.22■□□□□ 0.83
ERBB3-209ENST00000549282 FLT4P35916 1363 aa20.21■□□□□ 0.83
ERBB3-209ENST00000549282 NSD3Q9BZ95 1437 aa20.21■□□□□ 0.83
ERBB3-209ENST00000549282 LOC102724428A0A0B4J2F2 783 aa20.21■□□□□ 0.83
ERBB3-209ENST00000549282 SIK1P57059 783 aa20.21■□□□□ 0.83
ERBB3-209ENST00000549282 KIF24Q5T7B8 1368 aa20.21■□□□□ 0.83
ERBB3-209ENST00000549282 SPG7Q9UQ90 795 aa20.19■□□□□ 0.82
ERBB3-209ENST00000549282 MAP2P11137 1827 aaKnown RBP20.18■□□□□ 0.82
ERBB3-209ENST00000549282 TMF1P82094 1093 aa20.18■□□□□ 0.82
ERBB3-209ENST00000549282 ITPK1Q13572 414 aa20.18■□□□□ 0.82
ERBB3-209ENST00000549282 EMILIN1Q9Y6C2 1016 aa20.18■□□□□ 0.82
ERBB3-209ENST00000549282 GNPATO15228 680 aa20.17■□□□□ 0.82
ERBB3-209ENST00000549282 ATP6V1AP38606 617 aa20.17■□□□□ 0.82
ERBB3-209ENST00000549282 APLP1P51693 650 aa20.17■□□□□ 0.82
ERBB3-209ENST00000549282 ASAP1Q9ULH1 1129 aa20.17■□□□□ 0.82
ERBB3-209ENST00000549282 MMP10P09238 476 aa20.16■□□□□ 0.82
ERBB3-209ENST00000549282 TMOD3Q9NYL9 352 aa20.16■□□□□ 0.82
ERBB3-209ENST00000549282 TOMM70O94826 608 aa20.15■□□□□ 0.82
ERBB3-209ENST00000549282 DNAJC5GQ8N7S2 189 aa20.15■□□□□ 0.82
ERBB3-209ENST00000549282 PKD1L3Q7Z443 1732 aa20.15■□□□□ 0.82
ERBB3-209ENST00000549282 PPM1GO15355 546 aaPredicted RBP20.14■□□□□ 0.81
ERBB3-209ENST00000549282 TGFB2P61812 414 aa20.14■□□□□ 0.81
ERBB3-209ENST00000549282 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.14■□□□□ 0.81
ERBB3-209ENST00000549282 A0A0G2JLW4 131 aa20.13■□□□□ 0.81
ERBB3-209ENST00000549282 CARD14Q9BXL6 1004 aa20.13■□□□□ 0.81
ERBB3-209ENST00000549282 ATG3Q9NT62 314 aa20.13■□□□□ 0.81
ERBB3-209ENST00000549282 BCS1LQ9Y276 419 aa20.13■□□□□ 0.81
ERBB3-209ENST00000549282 KIF20BQ96Q89 1820 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms