RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 HMGB2P26583 209 aaKnown RBP6.76□□□□□ -1.33
SCAF11-212ENST00000549162 NBPF1Q3BBV0 1214 aa6.76□□□□□ -1.33
SCAF11-212ENST00000549162 PNISRQ8TF01 805 aaKnown RBP6.76□□□□□ -1.33
SCAF11-212ENST00000549162 HOXB7P09629 217 aa6.76□□□□□ -1.33
SCAF11-212ENST00000549162 RSPH6AQ9H0K4 717 aa6.76□□□□□ -1.33
SCAF11-212ENST00000549162 CFAP70Q5T0N1 1121 aa6.76□□□□□ -1.33
SCAF11-212ENST00000549162 DCAF11Q8TEB1 546 aa6.76□□□□□ -1.33
SCAF11-212ENST00000549162 KIF16BQ96L93 1317 aa6.75□□□□□ -1.33
SCAF11-212ENST00000549162 ZC3H15Q8WU90 426 aaKnown RBP6.75□□□□□ -1.33
SCAF11-212ENST00000549162 CARD11Q9BXL7 1154 aa6.75□□□□□ -1.33
SCAF11-212ENST00000549162 DICER1Q9UPY3 1922 aaKnown RBP6.74□□□□□ -1.33
SCAF11-212ENST00000549162 WDR63Q8IWG1 891 aa6.74□□□□□ -1.33
SCAF11-212ENST00000549162 TERF2IPQ9NYB0 399 aa6.74□□□□□ -1.33
SCAF11-212ENST00000549162 IL17RAQ96F46 866 aa6.73□□□□□ -1.33
SCAF11-212ENST00000549162 ST20-MTHFSA0A0A6YYL1 179 aa6.73□□□□□ -1.33
SCAF11-212ENST00000549162 BARGINQ6ZT62 677 aa6.73□□□□□ -1.33
SCAF11-212ENST00000549162 CADPS2Q86UW7 1296 aa6.73□□□□□ -1.33
SCAF11-212ENST00000549162 KCNH5Q8NCM2 988 aa6.73□□□□□ -1.33
SCAF11-212ENST00000549162 C10orf71Q711Q0 1435 aa6.73□□□□□ -1.33
SCAF11-212ENST00000549162 ERBB4Q15303 1308 aa6.73□□□□□ -1.33
SCAF11-212ENST00000549162 CCER1Q8TC90 406 aaPredicted RBP6.72□□□□□ -1.33
SCAF11-212ENST00000549162 IL13P35225 146 aa6.72□□□□□ -1.33
SCAF11-212ENST00000549162 MIER1Q8N108 512 aa6.72□□□□□ -1.33
SCAF11-212ENST00000549162 PNNQ9H307 717 aaKnown RBP6.72□□□□□ -1.33
SCAF11-212ENST00000549162 CCDC9Q9Y3X0 531 aaKnown RBP6.72□□□□□ -1.33
SCAF11-212ENST00000549162 NECTIN2Q92692 538 aa6.71□□□□□ -1.33
SCAF11-212ENST00000549162 AMOTL2Q9Y2J4 779 aa6.71□□□□□ -1.33
SCAF11-212ENST00000549162 MYH7P12883 1935 aa6.71□□□□□ -1.33
SCAF11-212ENST00000549162 TXNDC2Q86VQ3 553 aa6.71□□□□□ -1.34
SCAF11-212ENST00000549162 CDCA7Q9BWT1 371 aaPredicted RBP6.71□□□□□ -1.34
SCAF11-212ENST00000549162 NPHP3Q7Z494 1330 aa6.71□□□□□ -1.34
SCAF11-212ENST00000549162 TRIM52Q96A61 297 aa6.7□□□□□ -1.34
SCAF11-212ENST00000549162 AK9Q5TCS8 1911 aa6.7□□□□□ -1.34
SCAF11-212ENST00000549162 ANKRD31Q8N7Z5 1873 aa6.7□□□□□ -1.34
SCAF11-212ENST00000549162 FYB1O15117 783 aa6.7□□□□□ -1.34
SCAF11-212ENST00000549162 STAG3Q9UJ98 1225 aa6.7□□□□□ -1.34
SCAF11-212ENST00000549162 ARID3CA6NKF2 412 aa6.69□□□□□ -1.34
SCAF11-212ENST00000549162 FCHSD2O94868 740 aa6.69□□□□□ -1.34
SCAF11-212ENST00000549162 PPP2R1AP30153 589 aa6.69□□□□□ -1.34
SCAF11-212ENST00000549162 CDK19Q9BWU1 502 aa6.69□□□□□ -1.34
SCAF11-212ENST00000549162 GGT6Q6P531 493 aa6.69□□□□□ -1.34
SCAF11-212ENST00000549162 ARHGEF25Q86VW2 580 aa6.69□□□□□ -1.34
SCAF11-212ENST00000549162 GREB1LQ9C091 1923 aaPredicted RBP6.69□□□□□ -1.34
SCAF11-212ENST00000549162 NUDT16Q96DE0 195 aaKnown RBP6.69□□□□□ -1.34
SCAF11-212ENST00000549162 THSD7BQ9C0I4 1608 aa6.69□□□□□ -1.34
SCAF11-212ENST00000549162 TMED8Q6PL24 325 aaPredicted RBP6.69□□□□□ -1.34
SCAF11-212ENST00000549162 FNBP4Q8N3X1 1017 aaPredicted RBP6.68□□□□□ -1.34
SCAF11-212ENST00000549162 IP6K1Q92551 441 aa6.68□□□□□ -1.34
SCAF11-212ENST00000549162 ARHGAP45Q92619 1136 aa6.68□□□□□ -1.34
SCAF11-212ENST00000549162 KDM6AO15550 1401 aaPredicted RBP6.68□□□□□ -1.34
SCAF11-212ENST00000549162 CARMIL3Q8ND23 1372 aa6.67□□□□□ -1.34
SCAF11-212ENST00000549162 UTYO14607 1347 aa6.67□□□□□ -1.34
SCAF11-212ENST00000549162 ZBTB7CA1YPR0 619 aa6.67□□□□□ -1.34
SCAF11-212ENST00000549162 STK25O00506 426 aa6.67□□□□□ -1.34
SCAF11-212ENST00000549162 PRAM1Q96QH2 718 aa6.67□□□□□ -1.34
SCAF11-212ENST00000549162 RTL9Q8NET4 1388 aa6.67□□□□□ -1.34
SCAF11-212ENST00000549162 MEGF6O75095 1541 aa6.67□□□□□ -1.34
SCAF11-212ENST00000549162 POLA2Q14181 598 aa6.66□□□□□ -1.34
SCAF11-212ENST00000549162 PSME1Q06323 249 aa6.66□□□□□ -1.34
SCAF11-212ENST00000549162 ADAMTSL1Q8N6G6 1762 aa6.65□□□□□ -1.34
SCAF11-212ENST00000549162 SNED1Q8TER0 1413 aa6.65□□□□□ -1.34
SCAF11-212ENST00000549162 CDK5RAP2Q96SN8 1893 aa6.65□□□□□ -1.34
SCAF11-212ENST00000549162 PDIA4P13667 645 aaKnown RBP6.65□□□□□ -1.34
SCAF11-212ENST00000549162 GPBP1L1Q9HC44 474 aaPredicted RBP6.65□□□□□ -1.34
SCAF11-212ENST00000549162 ALDH1L2Q3SY69 923 aa6.65□□□□□ -1.35
SCAF11-212ENST00000549162 HDGFL2Q7Z4V5 671 aaPredicted RBP6.65□□□□□ -1.35
SCAF11-212ENST00000549162 ACEP12821 1306 aa6.65□□□□□ -1.35
SCAF11-212ENST00000549162 COL11A2P13942 1736 aaPredicted RBP6.64□□□□□ -1.35
SCAF11-212ENST00000549162 RIOK3O14730 519 aaKnown RBP6.64□□□□□ -1.35
SCAF11-212ENST00000549162 BRINP3Q76B58 766 aa6.64□□□□□ -1.35
SCAF11-212ENST00000549162 CHMP4AQ9BY43 222 aa6.63□□□□□ -1.35
SCAF11-212ENST00000549162 APBB1O00213 710 aa6.63□□□□□ -1.35
SCAF11-212ENST00000549162 POLKQ9UBT6 870 aa6.63□□□□□ -1.35
SCAF11-212ENST00000549162 FER1L6Q2WGJ9 1857 aa6.62□□□□□ -1.35
SCAF11-212ENST00000549162 RFX7Q2KHR2 1363 aa6.62□□□□□ -1.35
SCAF11-212ENST00000549162 ATP1B4Q9UN42 357 aaPredicted RBP6.62□□□□□ -1.35
SCAF11-212ENST00000549162 MYH15Q9Y2K3 1946 aa6.62□□□□□ -1.35
SCAF11-212ENST00000549162 PHF8Q9UPP1 1060 aa6.62□□□□□ -1.35
SCAF11-212ENST00000549162 MYH13Q9UKX3 1938 aa6.62□□□□□ -1.35
SCAF11-212ENST00000549162 WDR17Q8IZU2 1322 aa6.61□□□□□ -1.35
SCAF11-212ENST00000549162 EPB41L2O43491 1005 aaKnown RBP6.61□□□□□ -1.35
SCAF11-212ENST00000549162 RGS22Q8NE09 1264 aa6.61□□□□□ -1.35
SCAF11-212ENST00000549162 ZMYND10O75800 440 aa6.61□□□□□ -1.35
SCAF11-212ENST00000549162 CARD10Q9BWT7 1032 aa6.61□□□□□ -1.35
SCAF11-212ENST00000549162 IFT57Q9NWB7 429 aa6.61□□□□□ -1.35
SCAF11-212ENST00000549162 TAF1P21675 1872 aa6.61□□□□□ -1.35
SCAF11-212ENST00000549162 PANK3Q9H999 370 aa6.6□□□□□ -1.35
SCAF11-212ENST00000549162 SEMA3EO15041 775 aa6.6□□□□□ -1.35
SCAF11-212ENST00000549162 ABCC12Q96J65 1359 aa6.6□□□□□ -1.35
SCAF11-212ENST00000549162 NCKAP5LQ9HCH0 1330 aa6.6□□□□□ -1.35
SCAF11-212ENST00000549162 MKRN3Q13064 507 aaKnown RBP6.6□□□□□ -1.35
SCAF11-212ENST00000549162 WDR70Q9NW82 654 aa6.6□□□□□ -1.35
SCAF11-212ENST00000549162 ZC3H4Q9UPT8 1303 aaKnown RBP6.6□□□□□ -1.35
SCAF11-212ENST00000549162 CALD1Q05682 793 aaKnown RBP6.59□□□□□ -1.35
SCAF11-212ENST00000549162 AMOTQ4VCS5 1084 aa6.59□□□□□ -1.35
SCAF11-212ENST00000549162 RUNDC1Q96C34 613 aa6.59□□□□□ -1.35
SCAF11-212ENST00000549162 ESF1Q9H501 851 aaKnown RBP6.59□□□□□ -1.35
SCAF11-212ENST00000549162 FRMPD3Q5JV73 1810 aa6.59□□□□□ -1.35
SCAF11-212ENST00000549162 LRP10Q7Z4F1 713 aa6.59□□□□□ -1.35
SCAF11-212ENST00000549162 A0A0G2JMZ2 1700 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms