RNA–Protein interactions for RNA: ENST00000549128.5

CHPT1-204, Transcript of choline phosphotransferase 1, humanhuman

TSL 5

Gene CHPT1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-204ENST00000549128 ADAMTS8Q9UP79 889 aa35.16■■■■□ 3.22
CHPT1-204ENST00000549128 CCER2I3L3R5 266 aa35.15■■■■□ 3.22
CHPT1-204ENST00000549128 WDR43Q15061 677 aaKnown RBP eCLIP35.15■■■■□ 3.22
CHPT1-204ENST00000549128 DDB1Q16531 1140 aa35.14■■■■□ 3.22
CHPT1-204ENST00000549128 PARP4Q9UKK3 1724 aaKnown RBP35.14■■■■□ 3.22
CHPT1-204ENST00000549128 PRKAR2BP31323 418 aa35.13■■■■□ 3.21
CHPT1-204ENST00000549128 LRRC37A3O60309 1634 aa35.13■■■■□ 3.21
CHPT1-204ENST00000549128 EXOC5O00471 708 aa35.13■■■■□ 3.21
CHPT1-204ENST00000549128 FCHSD2O94868 740 aa35.13■■■■□ 3.21
CHPT1-204ENST00000549128 ZCRB1Q8TBF4 217 aaKnown RBP35.11■■■■□ 3.21
CHPT1-204ENST00000549128 BRWD3Q6RI45 1802 aa35.1■■■■□ 3.21
CHPT1-204ENST00000549128 PHACTR3Q96KR7 559 aa35.09■■■■□ 3.21
CHPT1-204ENST00000549128 TNS2Q63HR2 1409 aa35.09■■■■□ 3.21
CHPT1-204ENST00000549128 FAM182BQ5T319 152 aa35.07■■■■□ 3.2
CHPT1-204ENST00000549128 PLEKHF1Q96S99 279 aa35.07■■■■□ 3.2
CHPT1-204ENST00000549128 PDE3BQ13370 1112 aa35.05■■■■□ 3.2
CHPT1-204ENST00000549128 MARCH10Q8NA82 808 aaPredicted RBP35.05■■■■□ 3.2
CHPT1-204ENST00000549128 DDX54Q8TDD1 881 aaKnown RBP35.05■■■■□ 3.2
CHPT1-204ENST00000549128 PKD1L3Q7Z443 1732 aa35.05■■■■□ 3.2
CHPT1-204ENST00000549128 SHANK3Q9BYB0 1731 aa35.05■■■■□ 3.2
CHPT1-204ENST00000549128 CCDC146Q8IYE0 955 aa35.04■■■■□ 3.2
CHPT1-204ENST00000549128 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.04■■■■□ 3.24e-10■□□□□ 9.9
CHPT1-204ENST00000549128 PLEKHO1Q53GL0 409 aaPredicted RBP35.04■■■■□ 3.2
CHPT1-204ENST00000549128 KRT27Q7Z3Y8 459 aa35.04■■■■□ 3.2
CHPT1-204ENST00000549128 FAM9BQ8IZU0 186 aa35.04■■■■□ 3.2
CHPT1-204ENST00000549128 MTHFSDQ2M296 383 aaKnown RBP35.03■■■■□ 3.2
CHPT1-204ENST00000549128 SPG7Q9UQ90 795 aa35.03■■■■□ 3.2
CHPT1-204ENST00000549128 CYP27B1O15528 508 aa35.02■■■■□ 3.2
CHPT1-204ENST00000549128 ILDR2Q71H61 639 aa35.01■■■■□ 3.2
CHPT1-204ENST00000549128 AMOTQ4VCS5 1084 aa35■■■■□ 3.19
CHPT1-204ENST00000549128 PLEKHG2Q9H7P9 1386 aa35■■■■□ 3.19
CHPT1-204ENST00000549128 PCDH11XQ9BZA7 1347 aa34.98■■■■□ 3.19
CHPT1-204ENST00000549128 PCDH11YQ9BZA8 1340 aa34.98■■■■□ 3.19
CHPT1-204ENST00000549128 ZNF530Q6P9A1 599 aaPredicted RBP34.98■■■■□ 3.19
CHPT1-204ENST00000549128 PHKG2P15735 406 aa34.96■■■■□ 3.19
CHPT1-204ENST00000549128 PNNQ9H307 717 aaKnown RBP34.96■■■■□ 3.19
CHPT1-204ENST00000549128 RUNDC1Q96C34 613 aa34.94■■■■□ 3.18
CHPT1-204ENST00000549128 IFNL2Q8IZJ0 200 aa34.93■■■■□ 3.18
CHPT1-204ENST00000549128 EP400Q96L91 3159 aa34.93■■■■□ 3.18
CHPT1-204ENST00000549128 MAPK8IP3Q9UPT6 1336 aa34.92■■■■□ 3.18
CHPT1-204ENST00000549128 GAS2L2Q8NHY3 880 aa34.91■■■■□ 3.18
CHPT1-204ENST00000549128 NEFMP07197 916 aa34.9■■■■□ 3.18
CHPT1-204ENST00000549128 SENP3-EIF4A1A0A087X0R7 540 aa34.89■■■■□ 3.18
CHPT1-204ENST00000549128 AKAP4Q5JQC9 854 aa34.88■■■■□ 3.17
CHPT1-204ENST00000549128 C1orf141Q5JVX7 400 aa34.88■■■■□ 3.17
CHPT1-204ENST00000549128 NKX1-1Q15270 411 aaPredicted RBP34.87■■■■□ 3.17
CHPT1-204ENST00000549128 RRP7AQ9Y3A4 280 aaKnown RBP34.87■■■■□ 3.17
CHPT1-204ENST00000549128 NFE2L2Q16236 605 aa34.86■■■■□ 3.17
CHPT1-204ENST00000549128 MPRIPQ6WCQ1 1025 aa34.86■■■■□ 3.17
CHPT1-204ENST00000549128 APAF1O14727 1248 aa34.85■■■■□ 3.17
CHPT1-204ENST00000549128 TMPOP42166 694 aaKnown RBP34.84■■■■□ 3.17
CHPT1-204ENST00000549128 FAM196AQ6ZSG2 479 aa34.84■■■■□ 3.17
CHPT1-204ENST00000549128 ACSBG1Q96GR2 724 aa34.83■■■■□ 3.17
CHPT1-204ENST00000549128 LGR6Q9HBX8 967 aa34.83■■■■□ 3.17
CHPT1-204ENST00000549128 KDM6AO15550 1401 aaPredicted RBP34.82■■■■□ 3.17
CHPT1-204ENST00000549128 GNAT3A8MTJ3 354 aa34.82■■■■□ 3.16
CHPT1-204ENST00000549128 NEUROD2Q15784 382 aa34.82■■■■□ 3.16
CHPT1-204ENST00000549128 MAP3K5Q99683 1374 aa34.82■■■■□ 3.16
CHPT1-204ENST00000549128 BCL9O00512 1426 aa34.81■■■■□ 3.16
CHPT1-204ENST00000549128 PTF1AQ7RTS3 328 aa34.8■■■■□ 3.16
CHPT1-204ENST00000549128 KCNQ2O43526 872 aa34.79■■■■□ 3.16
CHPT1-204ENST00000549128 RIPK4P57078 832 aa34.79■■■■□ 3.16
CHPT1-204ENST00000549128 DCAF5Q96JK2 942 aa34.79■■■■□ 3.16
CHPT1-204ENST00000549128 DLG5Q8TDM6 1919 aa34.79■■■■□ 3.16
CHPT1-204ENST00000549128 HSP90AB1P08238 724 aaKnown RBP34.79■■■■□ 3.16
CHPT1-204ENST00000549128 IL17REQ8NFR9 667 aa34.79■■■■□ 3.16
CHPT1-204ENST00000549128 TOGARAM1Q9Y4F4 1720 aa34.78■■■■□ 3.16
CHPT1-204ENST00000549128 DCTN1Q14203 1278 aa34.78■■■■□ 3.16
CHPT1-204ENST00000549128 RNMTO43148 476 aaKnown RBP34.77■■■■□ 3.16
CHPT1-204ENST00000549128 PRIM1P49642 420 aaKnown RBP34.76■■■■□ 3.16
CHPT1-204ENST00000549128 KAT6BQ8WYB5 2073 aa34.76■■■■□ 3.15
CHPT1-204ENST00000549128 DOT1LQ8TEK3 1739 aa34.76■■■■□ 3.15
CHPT1-204ENST00000549128 TRIM37O94972 964 aa34.75■■■■□ 3.15
CHPT1-204ENST00000549128 MCM10Q7L590 875 aa34.75■■■■□ 3.15
CHPT1-204ENST00000549128 SBF2Q86WG5 1849 aa34.75■■■■□ 3.15
CHPT1-204ENST00000549128 SYTL4Q96C24 671 aaPredicted RBP34.74■■■■□ 3.15
CHPT1-204ENST00000549128 TRIM35Q9UPQ4 493 aa34.73■■■■□ 3.15
CHPT1-204ENST00000549128 ADAMTS7Q9UKP4 1686 aa34.72■■■■□ 3.15
CHPT1-204ENST00000549128 SCN11AQ9UI33 1791 aa34.71■■■■□ 3.15
CHPT1-204ENST00000549128 RTF1Q92541 710 aaKnown RBP34.71■■■■□ 3.15
CHPT1-204ENST00000549128 THUMPD2Q9BTF0 503 aaKnown RBP34.71■■■■□ 3.15
CHPT1-204ENST00000549128 HTATSF1O43719 755 aaKnown RBP34.7■■■■□ 3.15
CHPT1-204ENST00000549128 ERVV-2B6SEH9 535 aa34.7■■■■□ 3.14
CHPT1-204ENST00000549128 SALL2Q9Y467 1007 aaPredicted RBP34.7■■■■□ 3.14
CHPT1-204ENST00000549128 CEMIPQ8WUJ3 1361 aa34.7■■■■□ 3.14
CHPT1-204ENST00000549128 VIRMAQ69YN4 1812 aaKnown RBP34.69■■■■□ 3.14
CHPT1-204ENST00000549128 NHSQ6T4R5 1651 aa34.67■■■■□ 3.14
CHPT1-204ENST00000549128 CABP4P57796 275 aa34.67■■■■□ 3.14
CHPT1-204ENST00000549128 NFATC2IPQ8NCF5 419 aa34.67■■■■□ 3.14
CHPT1-204ENST00000549128 BCL11BQ9C0K0 894 aaPredicted RBP34.67■■■■□ 3.14
CHPT1-204ENST00000549128 ITGB4P16144 1822 aa34.67■■■■□ 3.14
CHPT1-204ENST00000549128 PIGBQ92521 554 aa34.66■■■■□ 3.14
CHPT1-204ENST00000549128 SLC52A2Q9HAB3 445 aa34.65■■■■□ 3.14
CHPT1-204ENST00000549128 TMOD3Q9NYL9 352 aa34.65■■■■□ 3.14
CHPT1-204ENST00000549128 LMOD3Q0VAK6 560 aa34.62■■■■□ 3.13
CHPT1-204ENST00000549128 MRC1P22897 1456 aa34.62■■■■□ 3.13
CHPT1-204ENST00000549128 TEFQ10587 303 aa34.61■■■■□ 3.13
CHPT1-204ENST00000549128 UPF1Q92900 1129 aaKnown RBP eCLIP34.61■■■■□ 3.13
CHPT1-204ENST00000549128 BTAF1O14981 1849 aa34.58■■■■□ 3.13
CHPT1-204ENST00000549128 WWC1Q8IX03 1113 aa34.58■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms