RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 ADCY9O60503 1353 aa27.48■■□□□ 1.99
CTDSP2-204ENST00000548823 KTN1Q86UP2 1357 aaKnown RBP27.47■■□□□ 1.99
CTDSP2-204ENST00000548823 ANKRD24Q8TF21 1146 aa27.47■■□□□ 1.99
CTDSP2-204ENST00000548823 LY75O60449 1722 aa27.46■■□□□ 1.99
CTDSP2-204ENST00000548823 DDX54Q8TDD1 881 aaKnown RBP27.46■■□□□ 1.99
CTDSP2-204ENST00000548823 USP31Q70CQ4 1352 aa27.45■■□□□ 1.99
CTDSP2-204ENST00000548823 LTN1O94822 1766 aa27.45■■□□□ 1.98
CTDSP2-204ENST00000548823 CARD11Q9BXL7 1154 aa27.45■■□□□ 1.98
CTDSP2-204ENST00000548823 MSH5O43196 834 aa27.44■■□□□ 1.98
CTDSP2-204ENST00000548823 ZNF526Q8TF50 670 aaPredicted RBP27.44■■□□□ 1.98
CTDSP2-204ENST00000548823 CD2APQ9Y5K6 639 aa27.44■■□□□ 1.98
CTDSP2-204ENST00000548823 ROCK2O75116 1388 aaKnown RBP27.43■■□□□ 1.98
CTDSP2-204ENST00000548823 COL23A1Q86Y22 540 aaPredicted RBP27.43■■□□□ 1.98
CTDSP2-204ENST00000548823 SYTL4Q96C24 671 aaPredicted RBP27.43■■□□□ 1.98
CTDSP2-204ENST00000548823 USP54Q70EL1 1684 aa27.42■■□□□ 1.98
CTDSP2-204ENST00000548823 ANKRD36BQ8N2N9 1353 aa27.42■■□□□ 1.98
CTDSP2-204ENST00000548823 PRIM1P49642 420 aaKnown RBP27.42■■□□□ 1.98
CTDSP2-204ENST00000548823 MON2Q7Z3U7 1717 aa27.4■■□□□ 1.98
CTDSP2-204ENST00000548823 CCNL1Q9UK58 526 aaPredicted RBP27.4■■□□□ 1.98
CTDSP2-204ENST00000548823 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.39■■□□□ 1.98
CTDSP2-204ENST00000548823 MSL1Q68DK7 614 aa27.38■■□□□ 1.97
CTDSP2-204ENST00000548823 NSD2O96028 1365 aa27.38■■□□□ 1.97
CTDSP2-204ENST00000548823 DOT1LQ8TEK3 1739 aa27.37■■□□□ 1.97
CTDSP2-204ENST00000548823 NME9Q86XW9 330 aa27.35■■□□□ 1.97
CTDSP2-204ENST00000548823 KIF7Q2M1P5 1343 aa27.35■■□□□ 1.97
CTDSP2-204ENST00000548823 ANP32CO43423 234 aa27.35■■□□□ 1.97
CTDSP2-204ENST00000548823 CENPBP07199 599 aaPredicted RBP27.35■■□□□ 1.97
CTDSP2-204ENST00000548823 KIF3CO14782 793 aa27.34■■□□□ 1.97
CTDSP2-204ENST00000548823 APLP1P51693 650 aa27.34■■□□□ 1.97
CTDSP2-204ENST00000548823 CCER2I3L3R5 266 aa27.33■■□□□ 1.97
CTDSP2-204ENST00000548823 FAM208AQ9UK61 1670 aaKnown RBP27.32■■□□□ 1.96
CTDSP2-204ENST00000548823 FLAD1Q8NFF5 587 aa27.31■■□□□ 1.96
CTDSP2-204ENST00000548823 SBNO2Q9Y2G9 1366 aa27.3■■□□□ 1.96
CTDSP2-204ENST00000548823 IP6K1Q92551 441 aa27.3■■□□□ 1.96
CTDSP2-204ENST00000548823 HMGB2P26583 209 aaKnown RBP27.29■■□□□ 1.96
CTDSP2-204ENST00000548823 DNAJC5GQ8N7S2 189 aa27.28■■□□□ 1.96
CTDSP2-204ENST00000548823 ZCRB1Q8TBF4 217 aaKnown RBP27.27■■□□□ 1.96
CTDSP2-204ENST00000548823 LTV1Q96GA3 475 aaPredicted RBP27.26■■□□□ 1.95
CTDSP2-204ENST00000548823 ST20-MTHFSA0A0A6YYL1 179 aa27.25■■□□□ 1.95
CTDSP2-204ENST00000548823 CD163L1Q9NR16 1453 aa27.25■■□□□ 1.95
CTDSP2-204ENST00000548823 C5P01031 1676 aa27.25■■□□□ 1.95
CTDSP2-204ENST00000548823 IGSF1Q8N6C5 1336 aa27.25■■□□□ 1.95
CTDSP2-204ENST00000548823 HDGFL2Q7Z4V5 671 aaPredicted RBP27.22■■□□□ 1.95
CTDSP2-204ENST00000548823 TOMM70O94826 608 aa27.21■■□□□ 1.95
CTDSP2-204ENST00000548823 EDC4Q6P2E9 1401 aaKnown RBP27.2■■□□□ 1.95
CTDSP2-204ENST00000548823 TAF1LQ8IZX4 1826 aa27.2■■□□□ 1.95
CTDSP2-204ENST00000548823 WWC3Q9ULE0 1092 aa27.2■■□□□ 1.94
CTDSP2-204ENST00000548823 MEGF6O75095 1541 aa27.18■■□□□ 1.94
CTDSP2-204ENST00000548823 TMC1Q8TDI8 760 aa27.17■■□□□ 1.94
CTDSP2-204ENST00000548823 RGPD2P0DJD1 1756 aa27.16■■□□□ 1.94
CTDSP2-204ENST00000548823 CICQ96RK0 1608 aaPredicted RBP27.15■■□□□ 1.94
CTDSP2-204ENST00000548823 CGNL1Q0VF96 1302 aa27.14■■□□□ 1.94
CTDSP2-204ENST00000548823 HOXC9P31274 260 aa27.14■■□□□ 1.94
CTDSP2-204ENST00000548823 SLC12A5Q9H2X9 1139 aa27.14■■□□□ 1.94
CTDSP2-204ENST00000548823 PALLDQ8WX93 1383 aa27.14■■□□□ 1.93
CTDSP2-204ENST00000548823 TESK2Q96S53 571 aa27.13■■□□□ 1.93
CTDSP2-204ENST00000548823 TERF2IPQ9NYB0 399 aa27.13■■□□□ 1.93
CTDSP2-204ENST00000548823 C4BP0C0L5 1744 aa27.13■■□□□ 1.93
CTDSP2-204ENST00000548823 COL13A1Q5TAT6 717 aaPredicted RBP27.12■■□□□ 1.93
CTDSP2-204ENST00000548823 AK7Q96M32 723 aa27.12■■□□□ 1.93
CTDSP2-204ENST00000548823 MAP3K19Q56UN5 1328 aa27.12■■□□□ 1.93
CTDSP2-204ENST00000548823 AMPHP49418 695 aa27.11■■□□□ 1.93
CTDSP2-204ENST00000548823 YTHDC1Q96MU7 727 aaKnown RBP27.11■■□□□ 1.93
CTDSP2-204ENST00000548823 UBR3Q6ZT12 1888 aa27.1■■□□□ 1.93
CTDSP2-204ENST00000548823 WDR90Q96KV7 1748 aa27.1■■□□□ 1.93
CTDSP2-204ENST00000548823 NSD3Q9BZ95 1437 aa27.1■■□□□ 1.93
CTDSP2-204ENST00000548823 AMIGO3Q86WK7 504 aa27.09■■□□□ 1.93
CTDSP2-204ENST00000548823 A0A1W2PP64 1363 aa27.09■■□□□ 1.93
CTDSP2-204ENST00000548823 TOGARAM1Q9Y4F4 1720 aa27.09■■□□□ 1.93
CTDSP2-204ENST00000548823 SLC24A1O60721 1099 aa27.09■■□□□ 1.93
CTDSP2-204ENST00000548823 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.08■■□□□ 1.93
CTDSP2-204ENST00000548823 PHF14O94880 888 aa27.08■■□□□ 1.93
CTDSP2-204ENST00000548823 MPRIPQ6WCQ1 1025 aa27.07■■□□□ 1.92
CTDSP2-204ENST00000548823 JMYQ8N9B5 988 aa27.07■■□□□ 1.92
CTDSP2-204ENST00000548823 RAPGEF4Q8WZA2 1011 aa27.07■■□□□ 1.92
CTDSP2-204ENST00000548823 SMARCC1Q92922 1105 aaPredicted RBP27.07■■□□□ 1.92
CTDSP2-204ENST00000548823 KLRG1Q96E93 195 aa27.07■■□□□ 1.92
CTDSP2-204ENST00000548823 PRKRIP1Q9H875 184 aaPredicted RBP27.07■■□□□ 1.92
CTDSP2-204ENST00000548823 SSFA2P28290 1259 aa27.06■■□□□ 1.92
CTDSP2-204ENST00000548823 NBPF6Q5VWK0 638 aa27.06■■□□□ 1.92
CTDSP2-204ENST00000548823 COG3Q96JB2 828 aa27.06■■□□□ 1.92
CTDSP2-204ENST00000548823 NBPF4Q96M43 638 aa27.06■■□□□ 1.92
CTDSP2-204ENST00000548823 CAPN15O75808 1086 aa27.05■■□□□ 1.92
CTDSP2-204ENST00000548823 TMF1P82094 1093 aa27.05■■□□□ 1.92
CTDSP2-204ENST00000548823 RBM46Q8TBY0 533 aaKnown RBP27.05■■□□□ 1.92
CTDSP2-204ENST00000548823 NMRK2Q9NPI5 230 aa27.05■■□□□ 1.92
CTDSP2-204ENST00000548823 PCDH11XQ9BZA7 1347 aa27.04■■□□□ 1.92
CTDSP2-204ENST00000548823 PCDH11YQ9BZA8 1340 aa27.04■■□□□ 1.92
CTDSP2-204ENST00000548823 TATP17735 454 aaPredicted RBP27.03■■□□□ 1.92
CTDSP2-204ENST00000548823 FBLN1P23142 703 aa27.03■■□□□ 1.92
CTDSP2-204ENST00000548823 SMIM5Q71RC9 77 aa27.03■■□□□ 1.92
CTDSP2-204ENST00000548823 RTL1A6NKG5 1358 aa27.02■■□□□ 1.92
CTDSP2-204ENST00000548823 PRELPP51888 382 aa27.01■■□□□ 1.91
CTDSP2-204ENST00000548823 TNS4Q8IZW8 715 aa27.01■■□□□ 1.91
CTDSP2-204ENST00000548823 USHBP1Q8N6Y0 703 aa27.01■■□□□ 1.91
CTDSP2-204ENST00000548823 PXDNLA1KZ92 1463 aa27■■□□□ 1.91
CTDSP2-204ENST00000548823 PUS7Q96PZ0 661 aaKnown RBP27■■□□□ 1.91
CTDSP2-204ENST00000548823 ITGB4P16144 1822 aa27■■□□□ 1.91
CTDSP2-204ENST00000548823 KIF13BQ9NQT8 1826 aa27■■□□□ 1.91
CTDSP2-204ENST00000548823 TGFB2P61812 414 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms