RNA–Protein interactions for RNA: ENST00000548265.1

PACS2-207, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 2

Gene PACS2, Length 402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-207ENST00000548265 SALL2Q9Y467 1007 aaPredicted RBP20.29■□□□□ 0.84
PACS2-207ENST00000548265 SLIT2O94813 1529 aa20.28■□□□□ 0.84
PACS2-207ENST00000548265 NRAPQ86VF7 1730 aa20.28■□□□□ 0.84
PACS2-207ENST00000548265 TMPOP42166 694 aaKnown RBP20.28■□□□□ 0.84
PACS2-207ENST00000548265 LMOD3Q0VAK6 560 aa20.28■□□□□ 0.84
PACS2-207ENST00000548265 NEUROD2Q15784 382 aa20.28■□□□□ 0.84
PACS2-207ENST00000548265 NFE2L2Q16236 605 aa20.28■□□□□ 0.84
PACS2-207ENST00000548265 AMOTQ4VCS5 1084 aa20.28■□□□□ 0.84
PACS2-207ENST00000548265 UNC5CLQ8IV45 518 aa20.28■□□□□ 0.84
PACS2-207ENST00000548265 CCDC9Q9Y3X0 531 aaKnown RBP20.28■□□□□ 0.84
PACS2-207ENST00000548265 PLEKHG2Q9H7P9 1386 aa20.27■□□□□ 0.84
PACS2-207ENST00000548265 CENPBP07199 599 aaPredicted RBP20.26■□□□□ 0.83
PACS2-207ENST00000548265 RIPK4P57078 832 aa20.26■□□□□ 0.83
PACS2-207ENST00000548265 PHACTR3Q96KR7 559 aa20.25■□□□□ 0.83
PACS2-207ENST00000548265 RRP7AQ9Y3A4 280 aaKnown RBP20.25■□□□□ 0.83
PACS2-207ENST00000548265 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.24■□□□□ 0.83
PACS2-207ENST00000548265 PARP4Q9UKK3 1724 aaKnown RBP20.24■□□□□ 0.83
PACS2-207ENST00000548265 SENP3-EIF4A1A0A087X0R7 540 aa20.24■□□□□ 0.83
PACS2-207ENST00000548265 IL2RBP14784 551 aa20.24■□□□□ 0.83
PACS2-207ENST00000548265 CCDC27Q2M243 656 aa20.24■□□□□ 0.83
PACS2-207ENST00000548265 USP35Q9P2H5 1018 aa20.24■□□□□ 0.83
PACS2-207ENST00000548265 SPG7Q9UQ90 795 aa20.24■□□□□ 0.83
PACS2-207ENST00000548265 THRAP3Q9Y2W1 955 aaKnown RBP20.24■□□□□ 0.83
PACS2-207ENST00000548265 BCL9LQ86UU0 1499 aa20.24■□□□□ 0.83
PACS2-207ENST00000548265 RTF1Q92541 710 aaKnown RBP20.23■□□□□ 0.83
PACS2-207ENST00000548265 DLG5Q8TDM6 1919 aa20.22■□□□□ 0.83
PACS2-207ENST00000548265 VPS72Q15906 364 aa20.22■□□□□ 0.83
PACS2-207ENST00000548265 C1orf141Q5JVX7 400 aa20.22■□□□□ 0.83
PACS2-207ENST00000548265 CDCA7Q9BWT1 371 aaPredicted RBP20.22■□□□□ 0.83
PACS2-207ENST00000548265 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.22■□□□□ 0.83
PACS2-207ENST00000548265 CALD1Q05682 793 aaKnown RBP20.21■□□□□ 0.83
PACS2-207ENST00000548265 PDE3BQ13370 1112 aa20.21■□□□□ 0.83
PACS2-207ENST00000548265 MTHFSDQ2M296 383 aaKnown RBP20.21■□□□□ 0.83
PACS2-207ENST00000548265 ZNF530Q6P9A1 599 aaPredicted RBP20.2■□□□□ 0.82
PACS2-207ENST00000548265 SPATA31A1Q5TZJ5 1347 aa20.2■□□□□ 0.82
PACS2-207ENST00000548265 SPATA31A5Q5VU36 1347 aa20.2■□□□□ 0.82
PACS2-207ENST00000548265 SPATA31A7Q8IWB4 1347 aa20.2■□□□□ 0.82
PACS2-207ENST00000548265 GNAT3A8MTJ3 354 aa20.19■□□□□ 0.82
PACS2-207ENST00000548265 MEGF6O75095 1541 aa20.18■□□□□ 0.82
PACS2-207ENST00000548265 HTATSF1O43719 755 aaKnown RBP20.18■□□□□ 0.82
PACS2-207ENST00000548265 GOLGA2Q08379 1002 aa20.18■□□□□ 0.82
PACS2-207ENST00000548265 WDR63Q8IWG1 891 aa20.18■□□□□ 0.82
PACS2-207ENST00000548265 WWC1Q8IX03 1113 aa20.18■□□□□ 0.82
PACS2-207ENST00000548265 OVOS2A0A0G2JMS6 1433 aa20.18■□□□□ 0.82
PACS2-207ENST00000548265 GLI3P10071 1580 aa20.17■□□□□ 0.82
PACS2-207ENST00000548265 AKAP4Q5JQC9 854 aa20.17■□□□□ 0.82
PACS2-207ENST00000548265 ZCRB1Q8TBF4 217 aaKnown RBP20.17■□□□□ 0.82
PACS2-207ENST00000548265 GJD4Q96KN9 370 aaPredicted RBP20.17■□□□□ 0.82
PACS2-207ENST00000548265 WNK3Q9BYP7 1800 aa20.17■□□□□ 0.82
PACS2-207ENST00000548265 MAP3K5Q99683 1374 aa20.17■□□□□ 0.82
PACS2-207ENST00000548265 PKD1L3Q7Z443 1732 aa20.16■□□□□ 0.82
PACS2-207ENST00000548265 PCDH11XQ9BZA7 1347 aa20.16■□□□□ 0.82
PACS2-207ENST00000548265 PCDH11YQ9BZA8 1340 aa20.16■□□□□ 0.82
PACS2-207ENST00000548265 HSP90AB1P08238 724 aaKnown RBP20.15■□□□□ 0.82
PACS2-207ENST00000548265 BARGINQ6ZT62 677 aa20.15■□□□□ 0.82
PACS2-207ENST00000548265 IFNL2Q8IZJ0 200 aa20.15■□□□□ 0.82
PACS2-207ENST00000548265 EXOC5O00471 708 aa20.14■□□□□ 0.81
PACS2-207ENST00000548265 TRIM35Q9UPQ4 493 aa20.14■□□□□ 0.81
PACS2-207ENST00000548265 E9PSI1 815 aa20.13■□□□□ 0.81
PACS2-207ENST00000548265 DEFB132Q7Z7B7 95 aa20.13■□□□□ 0.81
PACS2-207ENST00000548265 IL16Q14005 1332 aa20.12■□□□□ 0.81
PACS2-207ENST00000548265 ZNF521Q96K83 1311 aa20.12■□□□□ 0.81
PACS2-207ENST00000548265 BRWD3Q6RI45 1802 aa20.12■□□□□ 0.81
PACS2-207ENST00000548265 A0A0G2JS52 829 aa20.12■□□□□ 0.81
PACS2-207ENST00000548265 MYT1Q01538 1121 aa20.12■□□□□ 0.81
PACS2-207ENST00000548265 MYH16Q9H6N6 1097 aa20.12■□□□□ 0.81
PACS2-207ENST00000548265 DISP2A7MBM2 1401 aa20.11■□□□□ 0.81
PACS2-207ENST00000548265 DDB1Q16531 1140 aa20.11■□□□□ 0.81
PACS2-207ENST00000548265 PHKG2P15735 406 aa20.1■□□□□ 0.81
PACS2-207ENST00000548265 SF3B2Q13435 895 aaKnown RBP20.1■□□□□ 0.81
PACS2-207ENST00000548265 GNAI1P63096 354 aa20.09■□□□□ 0.81
PACS2-207ENST00000548265 TEFQ10587 303 aa20.09■□□□□ 0.81
PACS2-207ENST00000548265 FAM98CQ17RN3 349 aaKnown RBP20.09■□□□□ 0.81
PACS2-207ENST00000548265 MCM10Q7L590 875 aa20.09■□□□□ 0.81
PACS2-207ENST00000548265 DDX54Q8TDD1 881 aaKnown RBP20.09■□□□□ 0.81
PACS2-207ENST00000548265 VIRMAQ69YN4 1812 aaKnown RBP20.09■□□□□ 0.81
PACS2-207ENST00000548265 DCTN1Q14203 1278 aa20.08■□□□□ 0.81
PACS2-207ENST00000548265 LAS1LQ9Y4W2 734 aaKnown RBP20.08■□□□□ 0.81
PACS2-207ENST00000548265 TNS2Q63HR2 1409 aa20.08■□□□□ 0.8
PACS2-207ENST00000548265 SLFN5Q08AF3 891 aa20.07■□□□□ 0.8
PACS2-207ENST00000548265 DCAF5Q96JK2 942 aa20.07■□□□□ 0.8
PACS2-207ENST00000548265 IFT57Q9NWB7 429 aa20.07■□□□□ 0.8
PACS2-207ENST00000548265 RNMTO43148 476 aaKnown RBP20.06■□□□□ 0.8
PACS2-207ENST00000548265 MPRIPQ6WCQ1 1025 aa20.06■□□□□ 0.8
PACS2-207ENST00000548265 CYP27B1O15528 508 aa20.05■□□□□ 0.8
PACS2-207ENST00000548265 CDCA7LQ96GN5 454 aa20.05■□□□□ 0.8
PACS2-207ENST00000548265 THUMPD2Q9BTF0 503 aaKnown RBP20.05■□□□□ 0.8
PACS2-207ENST00000548265 SCN11AQ9UI33 1791 aa20.04■□□□□ 0.8
PACS2-207ENST00000548265 IL17REQ8NFR9 667 aa20.04■□□□□ 0.8
PACS2-207ENST00000548265 CFAP44Q96MT7 982 aa20.04■□□□□ 0.8
PACS2-207ENST00000548265 SHANK3Q9BYB0 1731 aa20.04■□□□□ 0.8
PACS2-207ENST00000548265 LRRC37A3O60309 1634 aa20.03■□□□□ 0.8
PACS2-207ENST00000548265 TAF7Q15545 349 aaPredicted RBP20.03■□□□□ 0.8
PACS2-207ENST00000548265 BABAM1Q9NWV8 329 aa20.03■□□□□ 0.8
PACS2-207ENST00000548265 LGR6Q9HBX8 967 aa20.02■□□□□ 0.8
PACS2-207ENST00000548265 CEMIPQ8WUJ3 1361 aa20.02■□□□□ 0.8
PACS2-207ENST00000548265 PSDA5PKW4 1024 aaPredicted RBP20.01■□□□□ 0.79
PACS2-207ENST00000548265 NKX1-1Q15270 411 aaPredicted RBP20.01■□□□□ 0.79
PACS2-207ENST00000548265 TSPYL4Q9UJ04 414 aa20.01■□□□□ 0.79
PACS2-207ENST00000548265 KAT6BQ8WYB5 2073 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms