RNA–Protein interactions for RNA: ENST00000547967.5

RNF41-203, Transcript of ring finger protein 41, humanhuman

TSL 1 (best)

Gene RNF41, Length 2,552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-203ENST00000547967 MSH5O43196 834 aa14.99□□□□□ -0.01
RNF41-203ENST00000547967 TSPYL4Q9UJ04 414 aa14.99□□□□□ -0.01
RNF41-203ENST00000547967 GNAT3A8MTJ3 354 aa14.98□□□□□ -0.01
RNF41-203ENST00000547967 ZC3H6P61129 1189 aaKnown RBP14.98□□□□□ -0.01
RNF41-203ENST00000547967 RWDD1Q9H446 243 aaPredicted RBP14.98□□□□□ -0.01
RNF41-203ENST00000547967 LTN1O94822 1766 aa14.98□□□□□ -0.01
RNF41-203ENST00000547967 NFAT5O94916 1531 aa14.97□□□□□ -0.01
RNF41-203ENST00000547967 BRPF1P55201 1214 aaPredicted RBP14.97□□□□□ -0.01
RNF41-203ENST00000547967 ARHGEF25Q86VW2 580 aa14.97□□□□□ -0.01
RNF41-203ENST00000547967 CRB1P82279 1406 aa14.97□□□□□ -0.01
RNF41-203ENST00000547967 RTL1A6NKG5 1358 aa14.97□□□□□ -0.01
RNF41-203ENST00000547967 AXIN2Q9Y2T1 843 aa14.96□□□□□ -0.01
RNF41-203ENST00000547967 STRCP1A6NGW2 1772 aa14.96□□□□□ -0.01
RNF41-203ENST00000547967 CADPS2Q86UW7 1296 aa14.96□□□□□ -0.01
RNF41-203ENST00000547967 ZBTB40Q9NUA8 1239 aa14.96□□□□□ -0.01
RNF41-203ENST00000547967 IL17REQ8NFR9 667 aa14.95□□□□□ -0.02
RNF41-203ENST00000547967 USP54Q70EL1 1684 aa14.95□□□□□ -0.02
RNF41-203ENST00000547967 CABLES1Q8TDN4 633 aa14.95□□□□□ -0.02
RNF41-203ENST00000547967 MST1RQ04912 1400 aa14.95□□□□□ -0.02
RNF41-203ENST00000547967 ANP32AP39687 249 aaKnown RBP14.94□□□□□ -0.02
RNF41-203ENST00000547967 ARHGAP45Q92619 1136 aa14.94□□□□□ -0.02
RNF41-203ENST00000547967 ANKRD24Q8TF21 1146 aa14.94□□□□□ -0.02
RNF41-203ENST00000547967 C1orf115Q9H7X2 142 aa14.93□□□□□ -0.02
RNF41-203ENST00000547967 PDZRN3Q9UPQ7 1066 aa14.93□□□□□ -0.02
RNF41-203ENST00000547967 SLC4A2P04920 1241 aa14.92□□□□□ -0.02
RNF41-203ENST00000547967 MSH6P52701 1360 aa14.92□□□□□ -0.02
RNF41-203ENST00000547967 MAP3K5Q99683 1374 aa14.92□□□□□ -0.02
RNF41-203ENST00000547967 ZBTB7BO15156 539 aaPredicted RBP14.92□□□□□ -0.02
RNF41-203ENST00000547967 HTATSF1O43719 755 aaKnown RBP14.92□□□□□ -0.02
RNF41-203ENST00000547967 NECTIN2Q92692 538 aa14.92□□□□□ -0.02
RNF41-203ENST00000547967 USP19O94966 1318 aa14.92□□□□□ -0.02
RNF41-203ENST00000547967 HAP1P54257 671 aaPredicted RBP14.91□□□□□ -0.02
RNF41-203ENST00000547967 FAM161AQ3B820 660 aa14.91□□□□□ -0.02
RNF41-203ENST00000547967 ZNF335Q9H4Z2 1342 aaPredicted RBP14.91□□□□□ -0.02
RNF41-203ENST00000547967 KIAA0232Q92628 1395 aa14.91□□□□□ -0.02
RNF41-203ENST00000547967 C8orf34Q49A92 452 aa14.91□□□□□ -0.02
RNF41-203ENST00000547967 API5Q9BZZ5 524 aaKnown RBP14.91□□□□□ -0.02
RNF41-203ENST00000547967 LGR6Q9HBX8 967 aa14.91□□□□□ -0.02
RNF41-203ENST00000547967 ABCC4O15439 1325 aa14.9□□□□□ -0.02
RNF41-203ENST00000547967 NPHP3Q7Z494 1330 aa14.9□□□□□ -0.02
RNF41-203ENST00000547967 LMTK3Q96Q04 1460 aa14.9□□□□□ -0.02
RNF41-203ENST00000547967 HDAC1Q13547 482 aaPredicted RBP14.89□□□□□ -0.03
RNF41-203ENST00000547967 TAF7Q15545 349 aaPredicted RBP14.89□□□□□ -0.03
RNF41-203ENST00000547967 ZNF530Q6P9A1 599 aaPredicted RBP14.89□□□□□ -0.03
RNF41-203ENST00000547967 RGPD2P0DJD1 1756 aa14.89□□□□□ -0.03
RNF41-203ENST00000547967 TRPM3Q9HCF6 1732 aaPredicted RBP14.89□□□□□ -0.03
RNF41-203ENST00000547967 MPRIPQ6WCQ1 1025 aa14.89□□□□□ -0.03
RNF41-203ENST00000547967 CHRNA2Q15822 529 aa14.88□□□□□ -0.03
RNF41-203ENST00000547967 SLIT3O75094 1523 aa14.88□□□□□ -0.03
RNF41-203ENST00000547967 DCCP43146 1447 aa14.88□□□□□ -0.03
RNF41-203ENST00000547967 KIF1AQ12756 1690 aa14.88□□□□□ -0.03
RNF41-203ENST00000547967 G2E3Q7L622 706 aa14.88□□□□□ -0.03
RNF41-203ENST00000547967 PLEKHO1Q53GL0 409 aaPredicted RBP14.87□□□□□ -0.03
RNF41-203ENST00000547967 BRINP3Q76B58 766 aa14.87□□□□□ -0.03
RNF41-203ENST00000547967 IPO9Q96P70 1041 aaKnown RBP14.87□□□□□ -0.03
RNF41-203ENST00000547967 NLRP2Q9NX02 1062 aa14.87□□□□□ -0.03
RNF41-203ENST00000547967 NCOA3Q9Y6Q9 1424 aa14.87□□□□□ -0.03
RNF41-203ENST00000547967 SLC4A10Q6U841 1118 aa14.86□□□□□ -0.03
RNF41-203ENST00000547967 ERICH6Q7L0X2 663 aa14.86□□□□□ -0.03
RNF41-203ENST00000547967 F6X3S4 739 aa14.86□□□□□ -0.03
RNF41-203ENST00000547967 ERBB3P21860 1342 aa14.86□□□□□ -0.03
RNF41-203ENST00000547967 STK31Q9BXU1 1019 aa14.85□□□□□ -0.03
RNF41-203ENST00000547967 MED1Q15648 1581 aaPredicted RBP14.85□□□□□ -0.03
RNF41-203ENST00000547967 CSB-PGBD3P0DP91 1061 aa14.85□□□□□ -0.03
RNF41-203ENST00000547967 C1orf141Q5JVX7 400 aa14.85□□□□□ -0.03
RNF41-203ENST00000547967 BCL11AQ9H165 835 aa14.85□□□□□ -0.03
RNF41-203ENST00000547967 CHMP4BQ9H444 224 aaKnown RBP14.85□□□□□ -0.03
RNF41-203ENST00000547967 SLAIN2Q9P270 581 aa14.85□□□□□ -0.03
RNF41-203ENST00000547967 STRCQ7RTU9 1775 aa14.85□□□□□ -0.03
RNF41-203ENST00000547967 TEFQ10587 303 aa14.84□□□□□ -0.03
RNF41-203ENST00000547967 AKAP4Q5JQC9 854 aa14.84□□□□□ -0.03
RNF41-203ENST00000547967 AMOTQ4VCS5 1084 aa14.84□□□□□ -0.03
RNF41-203ENST00000547967 SMC5Q8IY18 1101 aa14.84□□□□□ -0.03
RNF41-203ENST00000547967 PTPRCP08575 1304 aa14.84□□□□□ -0.03
RNF41-203ENST00000547967 SPATA31A3Q5VYP0 1347 aa14.84□□□□□ -0.03
RNF41-203ENST00000547967 KCNQ3O43525 872 aa14.83□□□□□ -0.03
RNF41-203ENST00000547967 INTS3Q68E01 1043 aaKnown RBP14.83□□□□□ -0.03
RNF41-203ENST00000547967 SIRT2Q8IXJ6 389 aa14.83□□□□□ -0.03
RNF41-203ENST00000547967 EIF2S2P20042 333 aaKnown RBP14.83□□□□□ -0.04
RNF41-203ENST00000547967 CCDC30Q5VVM6 783 aa14.83□□□□□ -0.04
RNF41-203ENST00000547967 LNPKQ9C0E8 428 aa14.83□□□□□ -0.04
RNF41-203ENST00000547967 RGS12O14924 1447 aa14.83□□□□□ -0.04
RNF41-203ENST00000547967 RGPD5Q99666 1765 aa14.83□□□□□ -0.04
RNF41-203ENST00000547967 ALS2Q96Q42 1657 aa14.83□□□□□ -0.04
RNF41-203ENST00000547967 CEMIPQ8WUJ3 1361 aa14.83□□□□□ -0.04
RNF41-203ENST00000547967 PHRF1Q9P1Y6 1649 aaKnown RBP14.83□□□□□ -0.04
RNF41-203ENST00000547967 TNS3Q68CZ2 1445 aa14.82□□□□□ -0.04
RNF41-203ENST00000547967 BTBD11A6QL63 1104 aa14.82□□□□□ -0.04
RNF41-203ENST00000547967 SEC24BO95487 1268 aa14.81□□□□□ -0.04
RNF41-203ENST00000547967 FKBP5Q13451 457 aaPredicted RBP14.81□□□□□ -0.04
RNF41-203ENST00000547967 RAPGEF4Q8WZA2 1011 aa14.81□□□□□ -0.04
RNF41-203ENST00000547967 ZBTB47Q9UFB7 747 aaPredicted RBP14.81□□□□□ -0.04
RNF41-203ENST00000547967 NOP58Q9Y2X3 529 aaKnown RBP14.81□□□□□ -0.04
RNF41-203ENST00000547967 HDGFL1Q5TGJ6 251 aa14.81□□□□□ -0.04
RNF41-203ENST00000547967 ANKRD45Q5TZF3 282 aa14.81□□□□□ -0.04
RNF41-203ENST00000547967 MEIS3Q99687 375 aa14.81□□□□□ -0.04
RNF41-203ENST00000547967 PXDNQ92626 1479 aa14.81□□□□□ -0.04
RNF41-203ENST00000547967 XIRP1Q702N8 1843 aaKnown RBP14.81□□□□□ -0.04
RNF41-203ENST00000547967 RNMTO43148 476 aaKnown RBP14.8□□□□□ -0.04
RNF41-203ENST00000547967 FLIIQ13045 1269 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms