RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 SERPINA10Q9UK55 444 aa7.21□□□□□ -1.26
LIMA1-203ENST00000547825 ARID4BQ4LE39 1312 aaPredicted RBP7.21□□□□□ -1.26
LIMA1-203ENST00000547825 ZNF428Q96B54 188 aa7.21□□□□□ -1.26
LIMA1-203ENST00000547825 RGPD8O14715 1765 aaPredicted RBP7.21□□□□□ -1.26
LIMA1-203ENST00000547825 TECPR2O15040 1411 aa7.21□□□□□ -1.26
LIMA1-203ENST00000547825 PTPRUQ92729 1446 aa7.21□□□□□ -1.26
LIMA1-203ENST00000547825 L3MBTL3Q96JM7 780 aaPredicted RBP7.2□□□□□ -1.26
LIMA1-203ENST00000547825 COL16A1Q07092 1604 aaPredicted RBP7.2□□□□□ -1.26
LIMA1-203ENST00000547825 SEC24BO95487 1268 aa7.2□□□□□ -1.26
LIMA1-203ENST00000547825 TRPM3Q9HCF6 1732 aaPredicted RBP7.2□□□□□ -1.26
LIMA1-203ENST00000547825 AHDC1Q5TGY3 1603 aaPredicted RBP7.2□□□□□ -1.26
LIMA1-203ENST00000547825 NCOA3Q9Y6Q9 1424 aa7.2□□□□□ -1.26
LIMA1-203ENST00000547825 C3orf80F5H4A9 247 aa7.2□□□□□ -1.26
LIMA1-203ENST00000547825 DLC1Q96QB1 1528 aa7.2□□□□□ -1.26
LIMA1-203ENST00000547825 PIK3C2GO75747 1445 aa7.2□□□□□ -1.26
LIMA1-203ENST00000547825 ROBO1Q9Y6N7 1651 aa7.19□□□□□ -1.26
LIMA1-203ENST00000547825 TBC1D2BQ9UPU7 963 aa7.19□□□□□ -1.26
LIMA1-203ENST00000547825 RGS3P49796 1198 aa7.19□□□□□ -1.26
LIMA1-203ENST00000547825 TRAIPQ9BWF2 469 aa7.19□□□□□ -1.26
LIMA1-203ENST00000547825 GLIPR1L2Q4G1C9 344 aa7.19□□□□□ -1.26
LIMA1-203ENST00000547825 EPAS1Q99814 870 aa7.19□□□□□ -1.26
LIMA1-203ENST00000547825 CDC42BPGQ6DT37 1551 aa7.18□□□□□ -1.26
LIMA1-203ENST00000547825 C6orf132Q5T0Z8 1188 aa7.18□□□□□ -1.26
LIMA1-203ENST00000547825 KHSRPQ92945 711 aaKnown RBP eCLIP7.18□□□□□ -1.26
LIMA1-203ENST00000547825 FAM198AQ9UFP1 575 aa7.18□□□□□ -1.26
LIMA1-203ENST00000547825 ABL2P42684 1182 aa7.18□□□□□ -1.26
LIMA1-203ENST00000547825 ANKRD30BQ9BXX2 1392 aa7.18□□□□□ -1.26
LIMA1-203ENST00000547825 WASHC2CQ9Y4E1 1318 aa7.18□□□□□ -1.26
LIMA1-203ENST00000547825 TYW1BQ6NUM6 668 aa7.17□□□□□ -1.26
LIMA1-203ENST00000547825 SPIRE2Q8WWL2 714 aa7.17□□□□□ -1.26
LIMA1-203ENST00000547825 PCDHB15Q9Y5E8 787 aa7.17□□□□□ -1.26
LIMA1-203ENST00000547825 PCDHGA4Q9Y5G9 962 aa7.17□□□□□ -1.26
LIMA1-203ENST00000547825 KANK1Q14678 1352 aa7.17□□□□□ -1.26
LIMA1-203ENST00000547825 PIK3R4Q99570 1358 aa7.17□□□□□ -1.26
LIMA1-203ENST00000547825 PTCH1Q13635 1447 aa7.17□□□□□ -1.26
LIMA1-203ENST00000547825 SLC34A2O95436 690 aa7.17□□□□□ -1.26
LIMA1-203ENST00000547825 FANCIQ9NVI1 1328 aa7.16□□□□□ -1.26
LIMA1-203ENST00000547825 LTKP29376 864 aa7.16□□□□□ -1.26
LIMA1-203ENST00000547825 RIMS2Q9UQ26 1411 aa7.16□□□□□ -1.26
LIMA1-203ENST00000547825 ALS2Q96Q42 1657 aa7.16□□□□□ -1.26
LIMA1-203ENST00000547825 OATP04181 439 aa7.16□□□□□ -1.26
LIMA1-203ENST00000547825 HSP90AA1P07900 732 aaKnown RBP7.16□□□□□ -1.26
LIMA1-203ENST00000547825 NDUFV2P19404 249 aa7.16□□□□□ -1.26
LIMA1-203ENST00000547825 SLC4A3P48751 1232 aa7.16□□□□□ -1.26
LIMA1-203ENST00000547825 NRKQ7Z2Y5 1582 aa7.16□□□□□ -1.26
LIMA1-203ENST00000547825 GLMNQ92990 594 aa7.16□□□□□ -1.26
LIMA1-203ENST00000547825 NAP1L5Q96NT1 182 aaPredicted RBP7.16□□□□□ -1.26
LIMA1-203ENST00000547825 ADAM33Q9BZ11 813 aa7.16□□□□□ -1.26
LIMA1-203ENST00000547825 MTMR7Q9Y216 660 aa7.16□□□□□ -1.26
LIMA1-203ENST00000547825 AKAP12Q02952 1782 aa7.15□□□□□ -1.26
LIMA1-203ENST00000547825 MOXD2PA6NHM9 499 aa7.15□□□□□ -1.26
LIMA1-203ENST00000547825 IDI1Q13907 227 aa7.15□□□□□ -1.26
LIMA1-203ENST00000547825 FOXD4L5Q5VV16 416 aaPredicted RBP7.15□□□□□ -1.26
LIMA1-203ENST00000547825 GGT6Q6P531 493 aa7.15□□□□□ -1.26
LIMA1-203ENST00000547825 RIC3Q7Z5B4 369 aa7.15□□□□□ -1.26
LIMA1-203ENST00000547825 FOXD4L4Q8WXT5 416 aaPredicted RBP7.15□□□□□ -1.26
LIMA1-203ENST00000547825 GZF1Q9H116 711 aaPredicted RBP7.15□□□□□ -1.26
LIMA1-203ENST00000547825 SLC52A1Q9NWF4 448 aa7.15□□□□□ -1.26
LIMA1-203ENST00000547825 ADAMTS19Q8TE59 1207 aa7.15□□□□□ -1.26
LIMA1-203ENST00000547825 L3MBTL2Q969R5 705 aa7.15□□□□□ -1.26
LIMA1-203ENST00000547825 CCDC7Q96M83 1385 aa7.15□□□□□ -1.27
LIMA1-203ENST00000547825 ITSN1Q15811 1721 aa7.15□□□□□ -1.27
LIMA1-203ENST00000547825 PPM1GO15355 546 aaPredicted RBP7.15□□□□□ -1.27
LIMA1-203ENST00000547825 CALR3Q96L12 384 aaKnown RBP7.15□□□□□ -1.27
LIMA1-203ENST00000547825 KIF1AQ12756 1690 aa7.14□□□□□ -1.27
LIMA1-203ENST00000547825 HSPA2P54652 639 aa7.14□□□□□ -1.27
LIMA1-203ENST00000547825 MLECQ14165 292 aa7.14□□□□□ -1.27
LIMA1-203ENST00000547825 C3orf67Q6ZVT6 689 aa7.14□□□□□ -1.27
LIMA1-203ENST00000547825 DCCP43146 1447 aa7.14□□□□□ -1.27
LIMA1-203ENST00000547825 RFX1P22670 979 aa7.14□□□□□ -1.27
LIMA1-203ENST00000547825 FOSBP53539 338 aa7.14□□□□□ -1.27
LIMA1-203ENST00000547825 ZNF454Q8N9F8 522 aa7.14□□□□□ -1.27
LIMA1-203ENST00000547825 TTC13Q8NBP0 860 aa7.14□□□□□ -1.27
LIMA1-203ENST00000547825 PRKRIP1Q9H875 184 aaPredicted RBP7.14□□□□□ -1.27
LIMA1-203ENST00000547825 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.14□□□□□ -1.27
LIMA1-203ENST00000547825 NUP155O75694 1391 aa7.14□□□□□ -1.27
LIMA1-203ENST00000547825 CDCA7LQ96GN5 454 aa7.13□□□□□ -1.27
LIMA1-203ENST00000547825 IPO9Q96P70 1041 aaKnown RBP7.13□□□□□ -1.27
LIMA1-203ENST00000547825 PHLPP1O60346 1717 aa7.13□□□□□ -1.27
LIMA1-203ENST00000547825 KIF7Q2M1P5 1343 aa7.13□□□□□ -1.27
LIMA1-203ENST00000547825 PPP2R2DQ66LE6 453 aa7.13□□□□□ -1.27
LIMA1-203ENST00000547825 SKAP1Q86WV1 359 aa7.13□□□□□ -1.27
LIMA1-203ENST00000547825 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.13□□□□□ -1.27
LIMA1-203ENST00000547825 NUDT7P0C024 238 aa7.13□□□□□ -1.27
LIMA1-203ENST00000547825 CABLES1Q8TDN4 633 aa7.13□□□□□ -1.27
LIMA1-203ENST00000547825 QRICH2Q9H0J4 1663 aa7.13□□□□□ -1.27
LIMA1-203ENST00000547825 RCCD1A6NED2 376 aa7.12□□□□□ -1.27
LIMA1-203ENST00000547825 AP1G2O75843 785 aa7.12□□□□□ -1.27
LIMA1-203ENST00000547825 RGS22Q8NE09 1264 aa7.12□□□□□ -1.27
LIMA1-203ENST00000547825 UPF2Q9HAU5 1272 aaKnown RBP7.12□□□□□ -1.27
LIMA1-203ENST00000547825 ERICH6BQ5W0A0 696 aa7.12□□□□□ -1.27
LIMA1-203ENST00000547825 BANK1Q8NDB2 785 aa7.12□□□□□ -1.27
LIMA1-203ENST00000547825 DDX11L8A8MPP1 907 aa7.11□□□□□ -1.27
LIMA1-203ENST00000547825 COL9A1P20849 921 aa7.11□□□□□ -1.27
LIMA1-203ENST00000547825 HLA-CQ95604 372 aa7.11□□□□□ -1.27
LIMA1-203ENST00000547825 RSBN1LQ6PCB5 846 aaPredicted RBP7.11□□□□□ -1.27
LIMA1-203ENST00000547825 HMX1Q9NP08 348 aaPredicted RBP7.11□□□□□ -1.27
LIMA1-203ENST00000547825 WNK3Q9BYP7 1800 aa7.11□□□□□ -1.27
LIMA1-203ENST00000547825 FBXW7Q969H0 707 aa7.11□□□□□ -1.27
LIMA1-203ENST00000547825 MST1RQ04912 1400 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms