RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 ZCRB1Q8TBF4 217 aaKnown RBP16.08■□□□□ 0.16
RAB5C-204ENST00000547517 ACSBG1Q96GR2 724 aa16.08■□□□□ 0.16
RAB5C-204ENST00000547517 EYA1Q99502 592 aa16.08■□□□□ 0.16
RAB5C-204ENST00000547517 RREB1Q92766 1687 aa16.08■□□□□ 0.16
RAB5C-204ENST00000547517 BCL11BQ9C0K0 894 aaPredicted RBP16.07■□□□□ 0.16
RAB5C-204ENST00000547517 PARD3Q8TEW0 1356 aa16.07■□□□□ 0.16
RAB5C-204ENST00000547517 PKD1L3Q7Z443 1732 aa16.07■□□□□ 0.16
RAB5C-204ENST00000547517 DOT1LQ8TEK3 1739 aa16.07■□□□□ 0.16
RAB5C-204ENST00000547517 RGPD3A6NKT7 1758 aaPredicted RBP16.06■□□□□ 0.16
RAB5C-204ENST00000547517 RGPD4Q7Z3J3 1758 aa16.06■□□□□ 0.16
RAB5C-204ENST00000547517 CAMKK2Q96RR4 588 aa16.06■□□□□ 0.16
RAB5C-204ENST00000547517 NUP188Q5SRE5 1749 aa16.05■□□□□ 0.16
RAB5C-204ENST00000547517 IGSF1Q8N6C5 1336 aa16.05■□□□□ 0.16
RAB5C-204ENST00000547517 PCDH11XQ9BZA7 1347 aa16.05■□□□□ 0.16
RAB5C-204ENST00000547517 PCDH11YQ9BZA8 1340 aa16.05■□□□□ 0.16
RAB5C-204ENST00000547517 KCNQ2O43526 872 aa16.05■□□□□ 0.16
RAB5C-204ENST00000547517 ZEB1P37275 1124 aaPredicted RBP16.04■□□□□ 0.16
RAB5C-204ENST00000547517 MTHFSP49914 203 aa16.04■□□□□ 0.16
RAB5C-204ENST00000547517 BTAF1O14981 1849 aa16.03■□□□□ 0.16
RAB5C-204ENST00000547517 SYTL4Q96C24 671 aaPredicted RBP16.01■□□□□ 0.15
RAB5C-204ENST00000547517 COL3A1P02461 1466 aaPredicted RBP16■□□□□ 0.15
RAB5C-204ENST00000547517 IL13P35225 146 aa16■□□□□ 0.15
RAB5C-204ENST00000547517 AEBP1Q8IUX7 1158 aa16■□□□□ 0.15
RAB5C-204ENST00000547517 SPG7Q9UQ90 795 aa16■□□□□ 0.15
RAB5C-204ENST00000547517 PSDA5PKW4 1024 aaPredicted RBP15.99■□□□□ 0.15
RAB5C-204ENST00000547517 PLSCR1O15162 318 aa15.99■□□□□ 0.15
RAB5C-204ENST00000547517 CYP27B1O15528 508 aa15.99■□□□□ 0.15
RAB5C-204ENST00000547517 TOGARAM1Q9Y4F4 1720 aa15.99■□□□□ 0.15
RAB5C-204ENST00000547517 PRIM1P49642 420 aaKnown RBP15.98■□□□□ 0.15
RAB5C-204ENST00000547517 SULT6B1Q6IMI4 303 aa15.98■□□□□ 0.15
RAB5C-204ENST00000547517 PLEKHG2Q9H7P9 1386 aa15.98■□□□□ 0.15
RAB5C-204ENST00000547517 KAT6BQ8WYB5 2073 aa15.98■□□□□ 0.15
RAB5C-204ENST00000547517 R3HDM1Q15032 1099 aaKnown RBP15.97■□□□□ 0.15
RAB5C-204ENST00000547517 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.97■□□□□ 0.15
RAB5C-204ENST00000547517 DIAPH1O60610 1272 aaKnown RBP15.96■□□□□ 0.15
RAB5C-204ENST00000547517 TXNRD1Q16881 649 aa15.96■□□□□ 0.15
RAB5C-204ENST00000547517 KDRP35968 1356 aa15.96■□□□□ 0.15
RAB5C-204ENST00000547517 DDX10Q13206 875 aaKnown RBP15.95■□□□□ 0.14
RAB5C-204ENST00000547517 HMOX1P09601 288 aa15.94■□□□□ 0.14
RAB5C-204ENST00000547517 PHKG2P15735 406 aa15.94■□□□□ 0.14
RAB5C-204ENST00000547517 PPP2R1AP30153 589 aa15.94■□□□□ 0.14
RAB5C-204ENST00000547517 NBPF14Q5TI25 921 aa15.94■□□□□ 0.14
RAB5C-204ENST00000547517 PROM2Q8N271 834 aa15.94■□□□□ 0.14
RAB5C-204ENST00000547517 ANO8Q9HCE9 1232 aaPredicted RBP15.94■□□□□ 0.14
RAB5C-204ENST00000547517 PLEKHO1Q53GL0 409 aaPredicted RBP15.93■□□□□ 0.14
RAB5C-204ENST00000547517 IFNL2Q8IZJ0 200 aa15.93■□□□□ 0.14
RAB5C-204ENST00000547517 CFAP53Q96M91 514 aa15.93■□□□□ 0.14
RAB5C-204ENST00000547517 ITGB4P16144 1822 aa15.92■□□□□ 0.14
RAB5C-204ENST00000547517 U2SURPO15042 1029 aaKnown RBP15.92■□□□□ 0.14
RAB5C-204ENST00000547517 ZNF530Q6P9A1 599 aaPredicted RBP15.92■□□□□ 0.14
RAB5C-204ENST00000547517 PAPPAQ13219 1627 aa15.92■□□□□ 0.14
RAB5C-204ENST00000547517 LY75O60449 1722 aa15.91■□□□□ 0.14
RAB5C-204ENST00000547517 NKX1-1Q15270 411 aaPredicted RBP15.91■□□□□ 0.14
RAB5C-204ENST00000547517 AMOTQ4VCS5 1084 aa15.91■□□□□ 0.14
RAB5C-204ENST00000547517 MPRIPQ6WCQ1 1025 aa15.91■□□□□ 0.14
RAB5C-204ENST00000547517 SRCAPQ6ZRS2 3230 aa15.89■□□□□ 0.13
RAB5C-204ENST00000547517 KDM6AO15550 1401 aaPredicted RBP15.89■□□□□ 0.13
RAB5C-204ENST00000547517 C1orf141Q5JVX7 400 aa15.89■□□□□ 0.13
RAB5C-204ENST00000547517 PALLDQ8WX93 1383 aa15.88■□□□□ 0.13
RAB5C-204ENST00000547517 HSP90AB1P08238 724 aaKnown RBP15.88■□□□□ 0.13
RAB5C-204ENST00000547517 KCNQ4P56696 695 aa15.88■□□□□ 0.13
RAB5C-204ENST00000547517 LRRC4BQ9NT99 713 aa15.88■□□□□ 0.13
RAB5C-204ENST00000547517 STK32BQ9NY57 414 aa15.88■□□□□ 0.13
RAB5C-204ENST00000547517 TMOD3Q9NYL9 352 aa15.88■□□□□ 0.13
RAB5C-204ENST00000547517 LRP5O75197 1615 aa15.87■□□□□ 0.13
RAB5C-204ENST00000547517 SLC27A3Q5K4L6 730 aa15.87■□□□□ 0.13
RAB5C-204ENST00000547517 PIGBQ92521 554 aa15.87■□□□□ 0.13
RAB5C-204ENST00000547517 DCAF5Q96JK2 942 aa15.86■□□□□ 0.13
RAB5C-204ENST00000547517 CCNL1Q9UK58 526 aaPredicted RBP15.86■□□□□ 0.13
RAB5C-204ENST00000547517 NUDCQ9Y266 331 aa15.86■□□□□ 0.13
RAB5C-204ENST00000547517 CASZ1Q86V15 1759 aa15.85■□□□□ 0.13
RAB5C-204ENST00000547517 SLC15A2Q16348 729 aa15.85■□□□□ 0.13
RAB5C-204ENST00000547517 ZNF827Q17R98 1081 aa15.85■□□□□ 0.13
RAB5C-204ENST00000547517 C5P01031 1676 aa15.84■□□□□ 0.13
RAB5C-204ENST00000547517 U2AF1L5P0DN76 240 aaPredicted RBP15.84■□□□□ 0.13
RAB5C-204ENST00000547517 U2AF1Q01081 240 aaKnown RBP eCLIP15.84■□□□□ 0.13
RAB5C-204ENST00000547517 RALBP1Q15311 655 aa15.84■□□□□ 0.13
RAB5C-204ENST00000547517 MTHFSDQ2M296 383 aaKnown RBP15.84■□□□□ 0.13
RAB5C-204ENST00000547517 SCN11AQ9UI33 1791 aa15.83■□□□□ 0.12
RAB5C-204ENST00000547517 ERVV-2B6SEH9 535 aa15.83■□□□□ 0.12
RAB5C-204ENST00000547517 PRKAR2BP31323 418 aa15.83■□□□□ 0.12
RAB5C-204ENST00000547517 CABP4P57796 275 aa15.83■□□□□ 0.12
RAB5C-204ENST00000547517 AKAP4Q5JQC9 854 aa15.83■□□□□ 0.12
RAB5C-204ENST00000547517 SMARCC1Q92922 1105 aaPredicted RBP15.83■□□□□ 0.12
RAB5C-204ENST00000547517 RSPH6AQ9H0K4 717 aa15.83■□□□□ 0.12
RAB5C-204ENST00000547517 PDGFDQ9GZP0 370 aaPredicted RBP15.82■□□□□ 0.12
RAB5C-204ENST00000547517 ASAP1Q9ULH1 1129 aa15.82■□□□□ 0.12
RAB5C-204ENST00000547517 MRC1P22897 1456 aa15.81■□□□□ 0.12
RAB5C-204ENST00000547517 AKT1S1Q96B36 256 aa15.81■□□□□ 0.12
RAB5C-204ENST00000547517 TUBGCP6Q96RT7 1819 aa15.81■□□□□ 0.12
RAB5C-204ENST00000547517 VIRMAQ69YN4 1812 aaKnown RBP15.8■□□□□ 0.12
RAB5C-204ENST00000547517 MAP3K5Q99683 1374 aa15.8■□□□□ 0.12
RAB5C-204ENST00000547517 MYBBP1AQ9BQG0 1328 aaKnown RBP15.8■□□□□ 0.12
RAB5C-204ENST00000547517 GAS2L2Q8NHY3 880 aa15.8■□□□□ 0.12
RAB5C-204ENST00000547517 ATG3Q9NT62 314 aa15.8■□□□□ 0.12
RAB5C-204ENST00000547517 TAF1LQ8IZX4 1826 aa15.8■□□□□ 0.12
RAB5C-204ENST00000547517 ADAMTS7Q9UKP4 1686 aa15.79■□□□□ 0.12
RAB5C-204ENST00000547517 LOC102724428A0A0B4J2F2 783 aa15.79■□□□□ 0.12
RAB5C-204ENST00000547517 ZNF316A6NFI3 1004 aaPredicted RBP15.79■□□□□ 0.12
RAB5C-204ENST00000547517 SIK1P57059 783 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms