RNA–Protein interactions for RNA: ENST00000546918.1

TUBA1A-203, Transcript of tubulin alpha 1a, humanhuman

TSL 3 BASIC

Gene TUBA1A, Length 984 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-203ENST00000546918 IL2RBP14784 551 aa23■■□□□ 1.27
TUBA1A-203ENST00000546918 TATP17735 454 aaPredicted RBP23■■□□□ 1.27
TUBA1A-203ENST00000546918 BARGINQ6ZT62 677 aa22.99■■□□□ 1.27
TUBA1A-203ENST00000546918 GJD4Q96KN9 370 aaPredicted RBP22.99■■□□□ 1.27
TUBA1A-203ENST00000546918 PHF23Q9BUL5 403 aaPredicted RBP22.99■■□□□ 1.27
TUBA1A-203ENST00000546918 QTRT2Q9H974 415 aaKnown RBP22.99■■□□□ 1.27
TUBA1A-203ENST00000546918 CDCA7Q9BWT1 371 aaPredicted RBP22.98■■□□□ 1.27
TUBA1A-203ENST00000546918 PHACTR3Q96KR7 559 aa22.97■■□□□ 1.27
TUBA1A-203ENST00000546918 DLG5Q8TDM6 1919 aa22.97■■□□□ 1.27
TUBA1A-203ENST00000546918 TNS2Q63HR2 1409 aa22.97■■□□□ 1.27
TUBA1A-203ENST00000546918 FAM98CQ17RN3 349 aaKnown RBP22.94■■□□□ 1.26
TUBA1A-203ENST00000546918 AMOTQ4VCS5 1084 aa22.94■■□□□ 1.26
TUBA1A-203ENST00000546918 PLEKHO1Q53GL0 409 aaPredicted RBP22.94■■□□□ 1.26
TUBA1A-203ENST00000546918 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.94■■□□□ 1.26
TUBA1A-203ENST00000546918 RGS17Q9UGC6 210 aaPredicted RBP22.93■■□□□ 1.26
TUBA1A-203ENST00000546918 APAF1O14727 1248 aa22.92■■□□□ 1.26
TUBA1A-203ENST00000546918 NFE2L2Q16236 605 aa22.92■■□□□ 1.26
TUBA1A-203ENST00000546918 MTHFSDQ2M296 383 aaKnown RBP22.92■■□□□ 1.26
TUBA1A-203ENST00000546918 GAS2L2Q8NHY3 880 aa22.92■■□□□ 1.26
TUBA1A-203ENST00000546918 SPG7Q9UQ90 795 aa22.92■■□□□ 1.26
TUBA1A-203ENST00000546918 PCDH11XQ9BZA7 1347 aa22.9■■□□□ 1.26
TUBA1A-203ENST00000546918 PCDH11YQ9BZA8 1340 aa22.9■■□□□ 1.26
TUBA1A-203ENST00000546918 VIRMAQ69YN4 1812 aaKnown RBP22.9■■□□□ 1.26
TUBA1A-203ENST00000546918 RBM6P78332 1123 aaKnown RBP22.9■■□□□ 1.26
TUBA1A-203ENST00000546918 ZNF530Q6P9A1 599 aaPredicted RBP22.9■■□□□ 1.26
TUBA1A-203ENST00000546918 ZCRB1Q8TBF4 217 aaKnown RBP22.9■■□□□ 1.26
TUBA1A-203ENST00000546918 TMPOP42166 694 aaKnown RBP22.89■■□□□ 1.25
TUBA1A-203ENST00000546918 MAP3K5Q99683 1374 aa22.89■■□□□ 1.25
TUBA1A-203ENST00000546918 ONECUT3O60422 494 aaPredicted RBP22.88■■□□□ 1.25
TUBA1A-203ENST00000546918 DDB1Q16531 1140 aa22.88■■□□□ 1.25
TUBA1A-203ENST00000546918 RRP7AQ9Y3A4 280 aaKnown RBP22.88■■□□□ 1.25
TUBA1A-203ENST00000546918 ADAMTS7Q9UKP4 1686 aa22.87■■□□□ 1.25
TUBA1A-203ENST00000546918 A0A0G2JS52 829 aa22.87■■□□□ 1.25
TUBA1A-203ENST00000546918 MYT1Q01538 1121 aa22.87■■□□□ 1.25
TUBA1A-203ENST00000546918 POTEAQ6S8J7 498 aa22.87■■□□□ 1.25
TUBA1A-203ENST00000546918 EXOC5O00471 708 aa22.86■■□□□ 1.25
TUBA1A-203ENST00000546918 HNRNPUQ00839 825 aaKnown RBP eCLIP22.86■■□□□ 1.25
TUBA1A-203ENST00000546918 BRWD3Q6RI45 1802 aa22.86■■□□□ 1.25
TUBA1A-203ENST00000546918 SCN11AQ9UI33 1791 aa22.86■■□□□ 1.25
TUBA1A-203ENST00000546918 SENP3-EIF4A1A0A087X0R7 540 aa22.85■■□□□ 1.25
TUBA1A-203ENST00000546918 RXRBP28702 533 aa22.85■■□□□ 1.25
TUBA1A-203ENST00000546918 RIPK4P57078 832 aa22.85■■□□□ 1.25
TUBA1A-203ENST00000546918 NEUROD2Q15784 382 aa22.85■■□□□ 1.25
TUBA1A-203ENST00000546918 AKAP4Q5JQC9 854 aa22.85■■□□□ 1.25
TUBA1A-203ENST00000546918 C1orf141Q5JVX7 400 aa22.85■■□□□ 1.25
TUBA1A-203ENST00000546918 NGEFQ8N5V2 710 aa22.85■■□□□ 1.25
TUBA1A-203ENST00000546918 CYP27B1O15528 508 aa22.84■■□□□ 1.25
TUBA1A-203ENST00000546918 PHKG2P15735 406 aa22.84■■□□□ 1.25
TUBA1A-203ENST00000546918 NCBP3Q53F19 620 aaKnown RBP22.84■■□□□ 1.25
TUBA1A-203ENST00000546918 IFNL2Q8IZJ0 200 aa22.84■■□□□ 1.25
TUBA1A-203ENST00000546918 RGS12O14924 1447 aa22.83■■□□□ 1.25
TUBA1A-203ENST00000546918 GNAT3A8MTJ3 354 aa22.83■■□□□ 1.25
TUBA1A-203ENST00000546918 LMOD3Q0VAK6 560 aa22.83■■□□□ 1.25
TUBA1A-203ENST00000546918 SEPT12Q8IYM1 358 aa22.83■■□□□ 1.25
TUBA1A-203ENST00000546918 TOGARAM1Q9Y4F4 1720 aa22.82■■□□□ 1.24
TUBA1A-203ENST00000546918 HTATSF1O43719 755 aaKnown RBP22.81■■□□□ 1.24
TUBA1A-203ENST00000546918 CCDC27Q2M243 656 aa22.81■■□□□ 1.24
TUBA1A-203ENST00000546918 DDX54Q8TDD1 881 aaKnown RBP22.81■■□□□ 1.24
TUBA1A-203ENST00000546918 YTHDC1Q96MU7 727 aaKnown RBP22.81■■□□□ 1.24
TUBA1A-203ENST00000546918 KDM6AO15550 1401 aaPredicted RBP22.81■■□□□ 1.24
TUBA1A-203ENST00000546918 DOT1LQ8TEK3 1739 aa22.8■■□□□ 1.24
TUBA1A-203ENST00000546918 TRIM35Q9UPQ4 493 aa22.8■■□□□ 1.24
TUBA1A-203ENST00000546918 SALL2Q9Y467 1007 aaPredicted RBP22.8■■□□□ 1.24
TUBA1A-203ENST00000546918 HSP90AB1P08238 724 aaKnown RBP22.79■■□□□ 1.24
TUBA1A-203ENST00000546918 RTF1Q92541 710 aaKnown RBP22.79■■□□□ 1.24
TUBA1A-203ENST00000546918 MRC1P22897 1456 aa22.79■■□□□ 1.24
TUBA1A-203ENST00000546918 SIPA1L3O60292 1781 aaPredicted RBP22.78■■□□□ 1.24
TUBA1A-203ENST00000546918 PDE3BQ13370 1112 aa22.78■■□□□ 1.24
TUBA1A-203ENST00000546918 MARCH10Q8NA82 808 aaPredicted RBP22.78■■□□□ 1.24
TUBA1A-203ENST00000546918 ZBED9Q6R2W3 1325 aa22.78■■□□□ 1.24
TUBA1A-203ENST00000546918 CEMIPQ8WUJ3 1361 aa22.77■■□□□ 1.24
TUBA1A-203ENST00000546918 NKX1-1Q15270 411 aaPredicted RBP22.77■■□□□ 1.24
TUBA1A-203ENST00000546918 WWC1Q8IX03 1113 aa22.77■■□□□ 1.24
TUBA1A-203ENST00000546918 DCAF5Q96JK2 942 aa22.77■■□□□ 1.24
TUBA1A-203ENST00000546918 MPRIPQ6WCQ1 1025 aa22.76■■□□□ 1.23
TUBA1A-203ENST00000546918 MCM10Q7L590 875 aa22.76■■□□□ 1.23
TUBA1A-203ENST00000546918 ZNF521Q96K83 1311 aa22.76■■□□□ 1.23
TUBA1A-203ENST00000546918 RNMTO43148 476 aaKnown RBP22.75■■□□□ 1.23
TUBA1A-203ENST00000546918 DCTN1Q14203 1278 aa22.75■■□□□ 1.23
TUBA1A-203ENST00000546918 ITGB4P16144 1822 aa22.74■■□□□ 1.23
TUBA1A-203ENST00000546918 IL17REQ8NFR9 667 aa22.74■■□□□ 1.23
TUBA1A-203ENST00000546918 THUMPD2Q9BTF0 503 aaKnown RBP22.73■■□□□ 1.23
TUBA1A-203ENST00000546918 LGR6Q9HBX8 967 aa22.73■■□□□ 1.23
TUBA1A-203ENST00000546918 BCL9O00512 1426 aa22.73■■□□□ 1.23
TUBA1A-203ENST00000546918 NHSQ6T4R5 1651 aa22.72■■□□□ 1.23
TUBA1A-203ENST00000546918 KRT27Q7Z3Y8 459 aa22.72■■□□□ 1.23
TUBA1A-203ENST00000546918 SBF2Q86WG5 1849 aa22.71■■□□□ 1.23
TUBA1A-203ENST00000546918 CALD1Q05682 793 aaKnown RBP22.71■■□□□ 1.23
TUBA1A-203ENST00000546918 WDR63Q8IWG1 891 aa22.7■■□□□ 1.22
TUBA1A-203ENST00000546918 KDM3BQ7LBC6 1761 aa22.69■■□□□ 1.22
TUBA1A-203ENST00000546918 PAPPAQ13219 1627 aa22.69■■□□□ 1.22
TUBA1A-203ENST00000546918 IL16Q14005 1332 aa22.69■■□□□ 1.22
TUBA1A-203ENST00000546918 ERVV-2B6SEH9 535 aa22.69■■□□□ 1.22
TUBA1A-203ENST00000546918 TEFQ10587 303 aa22.69■■□□□ 1.22
TUBA1A-203ENST00000546918 SLC52A2Q9HAB3 445 aa22.67■■□□□ 1.22
TUBA1A-203ENST00000546918 CABP4P57796 275 aa22.66■■□□□ 1.22
TUBA1A-203ENST00000546918 GOLGA2Q08379 1002 aa22.66■■□□□ 1.22
TUBA1A-203ENST00000546918 FAM182BQ5T319 152 aa22.66■■□□□ 1.22
TUBA1A-203ENST00000546918 IFT57Q9NWB7 429 aa22.64■■□□□ 1.21
TUBA1A-203ENST00000546918 TMOD3Q9NYL9 352 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms