RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 PLEKHO1Q53GL0 409 aaPredicted RBP25.19■■□□□ 1.62
SKP2-208ENST00000546211 AMOTQ4VCS5 1084 aa25.18■■□□□ 1.62
SKP2-208ENST00000546211 MCM10Q7L590 875 aa25.18■■□□□ 1.62
SKP2-208ENST00000546211 CFAP44Q96MT7 982 aa25.18■■□□□ 1.62
SKP2-208ENST00000546211 MAP3K5Q99683 1374 aa25.18■■□□□ 1.62
SKP2-208ENST00000546211 ZNF853P0CG23 659 aa25.18■■□□□ 1.62
SKP2-208ENST00000546211 EXOSC9Q06265 439 aaKnown RBP25.18■■□□□ 1.62
SKP2-208ENST00000546211 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.18■■□□□ 1.62
SKP2-208ENST00000546211 RAPGEF4Q8WZA2 1011 aa25.16■■□□□ 1.62
SKP2-208ENST00000546211 CERKQ8TCT0 537 aa25.15■■□□□ 1.62
SKP2-208ENST00000546211 COL5A2P05997 1499 aaPredicted RBP25.15■■□□□ 1.62
SKP2-208ENST00000546211 WDR17Q8IZU2 1322 aa25.15■■□□□ 1.62
SKP2-208ENST00000546211 MBIPQ9NS73 344 aa25.14■■□□□ 1.61
SKP2-208ENST00000546211 TATP17735 454 aaPredicted RBP25.13■■□□□ 1.61
SKP2-208ENST00000546211 CRB1P82279 1406 aa25.13■■□□□ 1.61
SKP2-208ENST00000546211 RARSP54136 660 aaKnown RBP25.12■■□□□ 1.61
SKP2-208ENST00000546211 ZNF530Q6P9A1 599 aaPredicted RBP25.12■■□□□ 1.61
SKP2-208ENST00000546211 PLEKHG2Q9H7P9 1386 aa25.12■■□□□ 1.61
SKP2-208ENST00000546211 PLIN1O60240 522 aa25.11■■□□□ 1.61
SKP2-208ENST00000546211 BCAR3O75815 825 aa25.11■■□□□ 1.61
SKP2-208ENST00000546211 AKAP4Q5JQC9 854 aa25.11■■□□□ 1.61
SKP2-208ENST00000546211 TOM1L2Q6ZVM7 507 aa25.11■■□□□ 1.61
SKP2-208ENST00000546211 EVA1CP58658 441 aa25.1■■□□□ 1.61
SKP2-208ENST00000546211 CHL1O00533 1208 aa25.1■■□□□ 1.61
SKP2-208ENST00000546211 C1orf141Q5JVX7 400 aa25.1■■□□□ 1.61
SKP2-208ENST00000546211 COL14A1Q05707 1796 aaKnown RBP25.09■■□□□ 1.61
SKP2-208ENST00000546211 LRRC37A3O60309 1634 aa25.09■■□□□ 1.61
SKP2-208ENST00000546211 STRN4Q9NRL3 753 aa25.08■■□□□ 1.61
SKP2-208ENST00000546211 IL17REQ8NFR9 667 aa25.07■■□□□ 1.6
SKP2-208ENST00000546211 SPG7Q9UQ90 795 aa25.07■■□□□ 1.6
SKP2-208ENST00000546211 ZNF428Q96B54 188 aa25.06■■□□□ 1.6
SKP2-208ENST00000546211 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.06■■□□□ 1.6
SKP2-208ENST00000546211 MEGF6O75095 1541 aa25.06■■□□□ 1.6
SKP2-208ENST00000546211 CARD10Q9BWT7 1032 aa25.05■■□□□ 1.6
SKP2-208ENST00000546211 BTG4Q9NY30 223 aa25.05■■□□□ 1.6
SKP2-208ENST00000546211 CANXP27824 592 aaKnown RBP25.05■■□□□ 1.6
SKP2-208ENST00000546211 PPP4R2Q9NY27 417 aa25.05■■□□□ 1.6
SKP2-208ENST00000546211 CEMIPQ8WUJ3 1361 aa25.04■■□□□ 1.6
SKP2-208ENST00000546211 TSPYL4Q9UJ04 414 aa25.04■■□□□ 1.6
SKP2-208ENST00000546211 LARP1Q6PKG0 1096 aaKnown RBP25.03■■□□□ 1.6
SKP2-208ENST00000546211 BABAM1Q9NWV8 329 aa25.03■■□□□ 1.6
SKP2-208ENST00000546211 TWISTNBQ3B726 338 aaPredicted RBP25.02■■□□□ 1.6
SKP2-208ENST00000546211 BCL2L13Q9BXK5 485 aa25.02■■□□□ 1.6
SKP2-208ENST00000546211 SMC4Q9NTJ3 1288 aa25.02■■□□□ 1.6
SKP2-208ENST00000546211 TAF7Q15545 349 aaPredicted RBP25.01■■□□□ 1.59
SKP2-208ENST00000546211 ALDH1L2Q3SY69 923 aa25.01■■□□□ 1.59
SKP2-208ENST00000546211 OVOS2A0A0G2JMS6 1433 aa25.01■■□□□ 1.59
SKP2-208ENST00000546211 VAMP4O75379 141 aa25.01■■□□□ 1.59
SKP2-208ENST00000546211 FRAT1Q92837 279 aaPredicted RBP25.01■■□□□ 1.59
SKP2-208ENST00000546211 PARP4Q9UKK3 1724 aaKnown RBP25■■□□□ 1.59
SKP2-208ENST00000546211 NUTM2BA6NNL0 878 aaPredicted RBP25■■□□□ 1.59
SKP2-208ENST00000546211 NUTM2EB1AL46 878 aaPredicted RBP25■■□□□ 1.59
SKP2-208ENST00000546211 ADAMTS2O95450 1211 aa25■■□□□ 1.59
SKP2-208ENST00000546211 MPRIPQ6WCQ1 1025 aa25■■□□□ 1.59
SKP2-208ENST00000546211 NUTM2AQ8IVF1 878 aaPredicted RBP25■■□□□ 1.59
SKP2-208ENST00000546211 TSPYL6Q8N831 410 aa25■■□□□ 1.59
SKP2-208ENST00000546211 C8orf58Q8NAV2 365 aa25■■□□□ 1.59
SKP2-208ENST00000546211 SSH1Q8WYL5 1049 aa25■■□□□ 1.59
SKP2-208ENST00000546211 LGR6Q9HBX8 967 aa25■■□□□ 1.59
SKP2-208ENST00000546211 RNMTO43148 476 aaKnown RBP24.99■■□□□ 1.59
SKP2-208ENST00000546211 TEFQ10587 303 aa24.99■■□□□ 1.59
SKP2-208ENST00000546211 MIS18AQ9NYP9 233 aa24.99■■□□□ 1.59
SKP2-208ENST00000546211 JCADQ9P266 1359 aa24.99■■□□□ 1.59
SKP2-208ENST00000546211 PKD1L3Q7Z443 1732 aa24.99■■□□□ 1.59
SKP2-208ENST00000546211 ELL2O00472 640 aaPredicted RBP24.98■■□□□ 1.59
SKP2-208ENST00000546211 C20orf194Q5TEA3 1177 aa24.98■■□□□ 1.59
SKP2-208ENST00000546211 IFNL2Q8IZJ0 200 aa24.98■■□□□ 1.59
SKP2-208ENST00000546211 EXOC6Q8TAG9 804 aa24.98■■□□□ 1.59
SKP2-208ENST00000546211 IL2RBP14784 551 aa24.97■■□□□ 1.59
SKP2-208ENST00000546211 PHKG2P15735 406 aa24.97■■□□□ 1.59
SKP2-208ENST00000546211 PDE3AQ14432 1141 aa24.97■■□□□ 1.59
SKP2-208ENST00000546211 CRBNQ96SW2 442 aa24.97■■□□□ 1.59
SKP2-208ENST00000546211 KIF16BQ96L93 1317 aa24.95■■□□□ 1.58
SKP2-208ENST00000546211 PLCH1Q4KWH8 1693 aa24.95■■□□□ 1.58
SKP2-208ENST00000546211 ZKSCAN2Q63HK3 967 aa24.94■■□□□ 1.58
SKP2-208ENST00000546211 ZCRB1Q8TBF4 217 aaKnown RBP24.94■■□□□ 1.58
SKP2-208ENST00000546211 ADAMTS7Q9UKP4 1686 aa24.94■■□□□ 1.58
SKP2-208ENST00000546211 HSP90AB1P08238 724 aaKnown RBP24.93■■□□□ 1.58
SKP2-208ENST00000546211 PCDH11XQ9BZA7 1347 aa24.93■■□□□ 1.58
SKP2-208ENST00000546211 PCDH11YQ9BZA8 1340 aa24.93■■□□□ 1.58
SKP2-208ENST00000546211 BRPF1P55201 1214 aaPredicted RBP24.93■■□□□ 1.58
SKP2-208ENST00000546211 KRT24Q2M2I5 525 aa24.93■■□□□ 1.58
SKP2-208ENST00000546211 USP35Q9P2H5 1018 aa24.93■■□□□ 1.58
SKP2-208ENST00000546211 MS4A1P11836 297 aa24.92■■□□□ 1.58
SKP2-208ENST00000546211 IPO8O15397 1037 aaKnown RBP24.91■■□□□ 1.58
SKP2-208ENST00000546211 CYP27B1O15528 508 aa24.91■■□□□ 1.58
SKP2-208ENST00000546211 VIRMAQ69YN4 1812 aaKnown RBP24.9■■□□□ 1.58
SKP2-208ENST00000546211 BTBD11A6QL63 1104 aa24.9■■□□□ 1.58
SKP2-208ENST00000546211 DCAF5Q96JK2 942 aa24.9■■□□□ 1.58
SKP2-208ENST00000546211 SOS1Q07889 1333 aaPredicted RBP24.9■■□□□ 1.58
SKP2-208ENST00000546211 KDM6AO15550 1401 aaPredicted RBP24.89■■□□□ 1.58
SKP2-208ENST00000546211 MRPL50Q8N5N7 158 aaKnown RBP24.89■■□□□ 1.58
SKP2-208ENST00000546211 NOB1Q9ULX3 412 aaKnown RBP24.89■■□□□ 1.58
SKP2-208ENST00000546211 SPATA31A6Q5VVP1 1343 aa24.88■■□□□ 1.57
SKP2-208ENST00000546211 NRAPQ86VF7 1730 aa24.88■■□□□ 1.57
SKP2-208ENST00000546211 PANK1Q8TE04 598 aa24.88■■□□□ 1.57
SKP2-208ENST00000546211 CCDC136Q96JN2 1154 aa24.88■■□□□ 1.57
SKP2-208ENST00000546211 KDM3BQ7LBC6 1761 aa24.88■■□□□ 1.57
SKP2-208ENST00000546211 SCN11AQ9UI33 1791 aa24.88■■□□□ 1.57
SKP2-208ENST00000546211 NWD2Q9ULI1 1742 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms