RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 AEBP1Q8IUX7 1158 aa14.33□□□□□ -0.12
PAAF1-216ENST00000546039 PNISRQ8TF01 805 aaKnown RBP14.33□□□□□ -0.12
PAAF1-216ENST00000546039 RSPH6AQ9H0K4 717 aa14.33□□□□□ -0.12
PAAF1-216ENST00000546039 PNNQ9H307 717 aaKnown RBP14.33□□□□□ -0.12
PAAF1-216ENST00000546039 SCN11AQ9UI33 1791 aa14.32□□□□□ -0.12
PAAF1-216ENST00000546039 KAT6BQ8WYB5 2073 aa14.32□□□□□ -0.12
PAAF1-216ENST00000546039 FCHSD2O94868 740 aa14.32□□□□□ -0.12
PAAF1-216ENST00000546039 FAM98CQ17RN3 349 aaKnown RBP14.31□□□□□ -0.12
PAAF1-216ENST00000546039 SBF2Q86WG5 1849 aa14.3□□□□□ -0.12
PAAF1-216ENST00000546039 NEFMP07197 916 aa14.3□□□□□ -0.12
PAAF1-216ENST00000546039 RXRBP28702 533 aa14.3□□□□□ -0.12
PAAF1-216ENST00000546039 PRKAR2BP31323 418 aa14.3□□□□□ -0.12
PAAF1-216ENST00000546039 POTEAQ6S8J7 498 aa14.3□□□□□ -0.12
PAAF1-216ENST00000546039 ADAMTS8Q9UP79 889 aa14.3□□□□□ -0.12
PAAF1-216ENST00000546039 ONECUT3O60422 494 aaPredicted RBP14.29□□□□□ -0.12
PAAF1-216ENST00000546039 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.29□□□□□ -0.12
PAAF1-216ENST00000546039 RGS12O14924 1447 aa14.29□□□□□ -0.12
PAAF1-216ENST00000546039 ADAMTS7Q9UKP4 1686 aa14.29□□□□□ -0.12
PAAF1-216ENST00000546039 DOT1LQ8TEK3 1739 aa14.29□□□□□ -0.12
PAAF1-216ENST00000546039 ITGB4P16144 1822 aa14.29□□□□□ -0.12
PAAF1-216ENST00000546039 AMOTQ4VCS5 1084 aa14.28□□□□□ -0.12
PAAF1-216ENST00000546039 FAM9BQ8IZU0 186 aa14.28□□□□□ -0.12
PAAF1-216ENST00000546039 MAPK8IP3Q9UPT6 1336 aa14.28□□□□□ -0.12
PAAF1-216ENST00000546039 TOGARAM1Q9Y4F4 1720 aa14.27□□□□□ -0.12
PAAF1-216ENST00000546039 PCDH11XQ9BZA7 1347 aa14.27□□□□□ -0.12
PAAF1-216ENST00000546039 PCDH11YQ9BZA8 1340 aa14.27□□□□□ -0.12
PAAF1-216ENST00000546039 A0A0G2JS52 829 aa14.27□□□□□ -0.13
PAAF1-216ENST00000546039 MYT1Q01538 1121 aa14.27□□□□□ -0.13
PAAF1-216ENST00000546039 DDB1Q16531 1140 aa14.27□□□□□ -0.13
PAAF1-216ENST00000546039 PLEKHO1Q53GL0 409 aaPredicted RBP14.27□□□□□ -0.13
PAAF1-216ENST00000546039 RUNDC1Q96C34 613 aa14.27□□□□□ -0.13
PAAF1-216ENST00000546039 PLEKHF1Q96S99 279 aa14.27□□□□□ -0.13
PAAF1-216ENST00000546039 SPG7Q9UQ90 795 aa14.27□□□□□ -0.13
PAAF1-216ENST00000546039 ZCRB1Q8TBF4 217 aaKnown RBP14.26□□□□□ -0.13
PAAF1-216ENST00000546039 SIPA1L3O60292 1781 aaPredicted RBP14.26□□□□□ -0.13
PAAF1-216ENST00000546039 EXOC5O00471 708 aa14.25□□□□□ -0.13
PAAF1-216ENST00000546039 SEPT12Q8IYM1 358 aa14.25□□□□□ -0.13
PAAF1-216ENST00000546039 GAS2L2Q8NHY3 880 aa14.25□□□□□ -0.13
PAAF1-216ENST00000546039 NHSQ6T4R5 1651 aa14.24□□□□□ -0.13
PAAF1-216ENST00000546039 ZNF530Q6P9A1 599 aaPredicted RBP14.24□□□□□ -0.13
PAAF1-216ENST00000546039 CCDC146Q8IYE0 955 aa14.24□□□□□ -0.13
PAAF1-216ENST00000546039 PHACTR3Q96KR7 559 aa14.23□□□□□ -0.13
PAAF1-216ENST00000546039 MAP3K5Q99683 1374 aa14.22□□□□□ -0.13
PAAF1-216ENST00000546039 PDE3BQ13370 1112 aa14.22□□□□□ -0.13
PAAF1-216ENST00000546039 NFE2L2Q16236 605 aa14.22□□□□□ -0.13
PAAF1-216ENST00000546039 MTHFSDQ2M296 383 aaKnown RBP14.22□□□□□ -0.13
PAAF1-216ENST00000546039 C1orf141Q5JVX7 400 aa14.22□□□□□ -0.13
PAAF1-216ENST00000546039 IFNL2Q8IZJ0 200 aa14.22□□□□□ -0.13
PAAF1-216ENST00000546039 HSP90AB1P08238 724 aaKnown RBP14.21□□□□□ -0.13
PAAF1-216ENST00000546039 PHKG2P15735 406 aa14.21□□□□□ -0.13
PAAF1-216ENST00000546039 AKAP4Q5JQC9 854 aa14.21□□□□□ -0.13
PAAF1-216ENST00000546039 BCL9O00512 1426 aa14.21□□□□□ -0.13
PAAF1-216ENST00000546039 BTAF1O14981 1849 aa14.2□□□□□ -0.14
PAAF1-216ENST00000546039 MRC1P22897 1456 aa14.2□□□□□ -0.14
PAAF1-216ENST00000546039 CYP27B1O15528 508 aa14.2□□□□□ -0.14
PAAF1-216ENST00000546039 TMPOP42166 694 aaKnown RBP14.2□□□□□ -0.14
PAAF1-216ENST00000546039 KRT27Q7Z3Y8 459 aa14.2□□□□□ -0.14
PAAF1-216ENST00000546039 DDX54Q8TDD1 881 aaKnown RBP14.2□□□□□ -0.14
PAAF1-216ENST00000546039 KDM6AO15550 1401 aaPredicted RBP14.19□□□□□ -0.14
PAAF1-216ENST00000546039 GNAT3A8MTJ3 354 aa14.19□□□□□ -0.14
PAAF1-216ENST00000546039 SOCS7O14512 581 aa14.19□□□□□ -0.14
PAAF1-216ENST00000546039 APAF1O14727 1248 aa14.19□□□□□ -0.14
PAAF1-216ENST00000546039 LMOD3Q0VAK6 560 aa14.19□□□□□ -0.14
PAAF1-216ENST00000546039 MARCH10Q8NA82 808 aaPredicted RBP14.19□□□□□ -0.14
PAAF1-216ENST00000546039 PAPPAQ13219 1627 aa14.19□□□□□ -0.14
PAAF1-216ENST00000546039 TNS1Q9HBL0 1735 aaKnown RBP14.18□□□□□ -0.14
PAAF1-216ENST00000546039 HTATSF1O43719 755 aaKnown RBP14.18□□□□□ -0.14
PAAF1-216ENST00000546039 NKX1-1Q15270 411 aaPredicted RBP14.18□□□□□ -0.14
PAAF1-216ENST00000546039 NCBP3Q53F19 620 aaKnown RBP14.18□□□□□ -0.14
PAAF1-216ENST00000546039 NGEFQ8N5V2 710 aa14.18□□□□□ -0.14
PAAF1-216ENST00000546039 KDM3BQ7LBC6 1761 aa14.18□□□□□ -0.14
PAAF1-216ENST00000546039 RIPK4P57078 832 aa14.16□□□□□ -0.14
PAAF1-216ENST00000546039 RTF1Q92541 710 aaKnown RBP14.16□□□□□ -0.14
PAAF1-216ENST00000546039 DCAF5Q96JK2 942 aa14.16□□□□□ -0.14
PAAF1-216ENST00000546039 RRP7AQ9Y3A4 280 aaKnown RBP14.16□□□□□ -0.14
PAAF1-216ENST00000546039 RGPD3A6NKT7 1758 aaPredicted RBP14.16□□□□□ -0.14
PAAF1-216ENST00000546039 RGPD4Q7Z3J3 1758 aa14.16□□□□□ -0.14
PAAF1-216ENST00000546039 UBR2Q8IWV8 1755 aa14.16□□□□□ -0.14
PAAF1-216ENST00000546039 CEMIPQ8WUJ3 1361 aa14.15□□□□□ -0.14
PAAF1-216ENST00000546039 NEUROD2Q15784 382 aa14.15□□□□□ -0.14
PAAF1-216ENST00000546039 RNMTO43148 476 aaKnown RBP14.14□□□□□ -0.15
PAAF1-216ENST00000546039 CCDC27Q2M243 656 aa14.14□□□□□ -0.15
PAAF1-216ENST00000546039 MPRIPQ6WCQ1 1025 aa14.14□□□□□ -0.15
PAAF1-216ENST00000546039 FAM196AQ6ZSG2 479 aa14.14□□□□□ -0.15
PAAF1-216ENST00000546039 LY75O60449 1722 aa14.13□□□□□ -0.15
PAAF1-216ENST00000546039 ERVV-2B6SEH9 535 aa14.13□□□□□ -0.15
PAAF1-216ENST00000546039 TRIM35Q9UPQ4 493 aa14.13□□□□□ -0.15
PAAF1-216ENST00000546039 EP400Q96L91 3159 aa14.11□□□□□ -0.15
PAAF1-216ENST00000546039 HNRNPUQ00839 825 aaKnown RBP eCLIP14.11□□□□□ -0.15
PAAF1-216ENST00000546039 CALD1Q05682 793 aaKnown RBP14.11□□□□□ -0.15
PAAF1-216ENST00000546039 TEFQ10587 303 aa14.11□□□□□ -0.15
PAAF1-216ENST00000546039 FAM182BQ5T319 152 aa14.11□□□□□ -0.15
PAAF1-216ENST00000546039 MCM10Q7L590 875 aa14.11□□□□□ -0.15
PAAF1-216ENST00000546039 IL17REQ8NFR9 667 aa14.11□□□□□ -0.15
PAAF1-216ENST00000546039 LGR6Q9HBX8 967 aa14.11□□□□□ -0.15
PAAF1-216ENST00000546039 ZNF831Q5JPB2 1677 aa14.1□□□□□ -0.15
PAAF1-216ENST00000546039 CABP4P57796 275 aa14.1□□□□□ -0.15
PAAF1-216ENST00000546039 DCTN1Q14203 1278 aa14.1□□□□□ -0.15
PAAF1-216ENST00000546039 WWC1Q8IX03 1113 aa14.1□□□□□ -0.15
PAAF1-216ENST00000546039 SLC52A2Q9HAB3 445 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms