RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 ADAMTS8Q9UP79 889 aa21.78■■□□□ 1.08
LIMS2-217ENST00000545738 NUDCQ9Y266 331 aa21.78■■□□□ 1.08
LIMS2-217ENST00000545738 TNS2Q63HR2 1409 aa21.76■■□□□ 1.07
LIMS2-217ENST00000545738 CCER2I3L3R5 266 aa21.76■■□□□ 1.07
LIMS2-217ENST00000545738 RAPGEF4Q8WZA2 1011 aa21.76■■□□□ 1.07
LIMS2-217ENST00000545738 PHACTR3Q96KR7 559 aa21.76■■□□□ 1.07
LIMS2-217ENST00000545738 PRKAR2BP31323 418 aa21.75■■□□□ 1.07
LIMS2-217ENST00000545738 PLEKHF1Q96S99 279 aa21.75■■□□□ 1.07
LIMS2-217ENST00000545738 A0A0G2JS52 829 aa21.75■■□□□ 1.07
LIMS2-217ENST00000545738 MYT1Q01538 1121 aa21.75■■□□□ 1.07
LIMS2-217ENST00000545738 TATP17735 454 aaPredicted RBP21.74■■□□□ 1.07
LIMS2-217ENST00000545738 FAM182BQ5T319 152 aa21.74■■□□□ 1.07
LIMS2-217ENST00000545738 FCHSD2O94868 740 aa21.72■■□□□ 1.07
LIMS2-217ENST00000545738 DDB1Q16531 1140 aa21.72■■□□□ 1.07
LIMS2-217ENST00000545738 CCDC146Q8IYE0 955 aa21.72■■□□□ 1.07
LIMS2-217ENST00000545738 WDR43Q15061 677 aaKnown RBP eCLIP21.72■■□□□ 1.07
LIMS2-217ENST00000545738 CDCA7Q9BWT1 371 aaPredicted RBP21.72■■□□□ 1.07
LIMS2-217ENST00000545738 CYP27B1O15528 508 aa21.71■■□□□ 1.07
LIMS2-217ENST00000545738 MARCH10Q8NA82 808 aaPredicted RBP21.71■■□□□ 1.07
LIMS2-217ENST00000545738 MTHFSDQ2M296 383 aaKnown RBP21.7■■□□□ 1.06
LIMS2-217ENST00000545738 ZCRB1Q8TBF4 217 aaKnown RBP21.7■■□□□ 1.06
LIMS2-217ENST00000545738 ILDR2Q71H61 639 aa21.69■■□□□ 1.06
LIMS2-217ENST00000545738 EXOC5O00471 708 aa21.69■■□□□ 1.06
LIMS2-217ENST00000545738 FAM9BQ8IZU0 186 aa21.69■■□□□ 1.06
LIMS2-217ENST00000545738 SENP3-EIF4A1A0A087X0R7 540 aa21.68■■□□□ 1.06
LIMS2-217ENST00000545738 PLEKHG2Q9H7P9 1386 aa21.67■■□□□ 1.06
LIMS2-217ENST00000545738 DDX54Q8TDD1 881 aaKnown RBP21.67■■□□□ 1.06
LIMS2-217ENST00000545738 DLG5Q8TDM6 1919 aa21.67■■□□□ 1.06
LIMS2-217ENST00000545738 TOGARAM1Q9Y4F4 1720 aa21.67■■□□□ 1.06
LIMS2-217ENST00000545738 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.66■■□□□ 1.06
LIMS2-217ENST00000545738 KRT27Q7Z3Y8 459 aa21.66■■□□□ 1.06
LIMS2-217ENST00000545738 PCDH11XQ9BZA7 1347 aa21.64■■□□□ 1.06
LIMS2-217ENST00000545738 PCDH11YQ9BZA8 1340 aa21.64■■□□□ 1.06
LIMS2-217ENST00000545738 PHKG2P15735 406 aa21.64■■□□□ 1.06
LIMS2-217ENST00000545738 PLEKHO1Q53GL0 409 aaPredicted RBP21.64■■□□□ 1.06
LIMS2-217ENST00000545738 ZNF530Q6P9A1 599 aaPredicted RBP21.64■■□□□ 1.06
LIMS2-217ENST00000545738 SPG7Q9UQ90 795 aa21.64■■□□□ 1.06
LIMS2-217ENST00000545738 VIRMAQ69YN4 1812 aaKnown RBP21.64■■□□□ 1.05
LIMS2-217ENST00000545738 PDE3BQ13370 1112 aa21.63■■□□□ 1.05
LIMS2-217ENST00000545738 KDM6AO15550 1401 aaPredicted RBP21.63■■□□□ 1.05
LIMS2-217ENST00000545738 AMOTQ4VCS5 1084 aa21.63■■□□□ 1.05
LIMS2-217ENST00000545738 DOT1LQ8TEK3 1739 aa21.62■■□□□ 1.05
LIMS2-217ENST00000545738 SBF2Q86WG5 1849 aa21.62■■□□□ 1.05
LIMS2-217ENST00000545738 RUNDC1Q96C34 613 aa21.61■■□□□ 1.05
LIMS2-217ENST00000545738 RRP7AQ9Y3A4 280 aaKnown RBP21.61■■□□□ 1.05
LIMS2-217ENST00000545738 ADAMTS7Q9UKP4 1686 aa21.61■■□□□ 1.05
LIMS2-217ENST00000545738 PTF1AQ7RTS3 328 aa21.6■■□□□ 1.05
LIMS2-217ENST00000545738 SCN11AQ9UI33 1791 aa21.59■■□□□ 1.05
LIMS2-217ENST00000545738 IFNL2Q8IZJ0 200 aa21.59■■□□□ 1.05
LIMS2-217ENST00000545738 MAPK8IP3Q9UPT6 1336 aa21.59■■□□□ 1.05
LIMS2-217ENST00000545738 APAF1O14727 1248 aa21.58■■□□□ 1.05
LIMS2-217ENST00000545738 NKX1-1Q15270 411 aaPredicted RBP21.58■■□□□ 1.05
LIMS2-217ENST00000545738 TMPOP42166 694 aaKnown RBP21.58■■□□□ 1.04
LIMS2-217ENST00000545738 NFE2L2Q16236 605 aa21.58■■□□□ 1.04
LIMS2-217ENST00000545738 AKAP4Q5JQC9 854 aa21.58■■□□□ 1.04
LIMS2-217ENST00000545738 MPRIPQ6WCQ1 1025 aa21.58■■□□□ 1.04
LIMS2-217ENST00000545738 GAS2L2Q8NHY3 880 aa21.58■■□□□ 1.04
LIMS2-217ENST00000545738 LGR6Q9HBX8 967 aa21.58■■□□□ 1.04
LIMS2-217ENST00000545738 KAT6BQ8WYB5 2073 aa21.57■■□□□ 1.04
LIMS2-217ENST00000545738 BCL9O00512 1426 aa21.57■■□□□ 1.04
LIMS2-217ENST00000545738 ITGB4P16144 1822 aa21.57■■□□□ 1.04
LIMS2-217ENST00000545738 MAP3K5Q99683 1374 aa21.57■■□□□ 1.04
LIMS2-217ENST00000545738 KCNQ2O43526 872 aa21.56■■□□□ 1.04
LIMS2-217ENST00000545738 DCTN1Q14203 1278 aa21.56■■□□□ 1.04
LIMS2-217ENST00000545738 ACSBG1Q96GR2 724 aa21.56■■□□□ 1.04
LIMS2-217ENST00000545738 NEUROD2Q15784 382 aa21.55■■□□□ 1.04
LIMS2-217ENST00000545738 IL17REQ8NFR9 667 aa21.55■■□□□ 1.04
LIMS2-217ENST00000545738 PNNQ9H307 717 aaKnown RBP21.55■■□□□ 1.04
LIMS2-217ENST00000545738 C1orf141Q5JVX7 400 aa21.55■■□□□ 1.04
LIMS2-217ENST00000545738 NHSQ6T4R5 1651 aa21.54■■□□□ 1.04
LIMS2-217ENST00000545738 MCM10Q7L590 875 aa21.54■■□□□ 1.04
LIMS2-217ENST00000545738 TRIM35Q9UPQ4 493 aa21.54■■□□□ 1.04
LIMS2-217ENST00000545738 GNAT3A8MTJ3 354 aa21.53■■□□□ 1.04
LIMS2-217ENST00000545738 THUMPD2Q9BTF0 503 aaKnown RBP21.53■■□□□ 1.04
LIMS2-217ENST00000545738 RIPK4P57078 832 aa21.52■■□□□ 1.04
LIMS2-217ENST00000545738 CEMIPQ8WUJ3 1361 aa21.52■■□□□ 1.04
LIMS2-217ENST00000545738 TNS1Q9HBL0 1735 aaKnown RBP21.52■■□□□ 1.04
LIMS2-217ENST00000545738 MRC1P22897 1456 aa21.52■■□□□ 1.04
LIMS2-217ENST00000545738 SIPA1L3O60292 1781 aaPredicted RBP21.52■■□□□ 1.04
LIMS2-217ENST00000545738 RNMTO43148 476 aaKnown RBP21.52■■□□□ 1.03
LIMS2-217ENST00000545738 FAM196AQ6ZSG2 479 aa21.52■■□□□ 1.03
LIMS2-217ENST00000545738 DCAF5Q96JK2 942 aa21.52■■□□□ 1.03
LIMS2-217ENST00000545738 NEFMP07197 916 aa21.51■■□□□ 1.03
LIMS2-217ENST00000545738 PRIM1P49642 420 aaKnown RBP21.5■■□□□ 1.03
LIMS2-217ENST00000545738 BTAF1O14981 1849 aa21.5■■□□□ 1.03
LIMS2-217ENST00000545738 TRIM37O94972 964 aa21.49■■□□□ 1.03
LIMS2-217ENST00000545738 SALL2Q9Y467 1007 aaPredicted RBP21.49■■□□□ 1.03
LIMS2-217ENST00000545738 HSP90AB1P08238 724 aaKnown RBP21.47■■□□□ 1.03
LIMS2-217ENST00000545738 SYTL4Q96C24 671 aaPredicted RBP21.47■■□□□ 1.03
LIMS2-217ENST00000545738 PIGBQ92521 554 aa21.46■■□□□ 1.03
LIMS2-217ENST00000545738 NFATC2IPQ8NCF5 419 aa21.46■■□□□ 1.03
LIMS2-217ENST00000545738 ERVV-2B6SEH9 535 aa21.45■■□□□ 1.02
LIMS2-217ENST00000545738 HTATSF1O43719 755 aaKnown RBP21.45■■□□□ 1.02
LIMS2-217ENST00000545738 SLC52A2Q9HAB3 445 aa21.45■■□□□ 1.02
LIMS2-217ENST00000545738 PAPPAQ13219 1627 aa21.44■■□□□ 1.02
LIMS2-217ENST00000545738 RTF1Q92541 710 aaKnown RBP21.43■■□□□ 1.02
LIMS2-217ENST00000545738 WWC1Q8IX03 1113 aa21.43■■□□□ 1.02
LIMS2-217ENST00000545738 BCL11BQ9C0K0 894 aaPredicted RBP21.43■■□□□ 1.02
LIMS2-217ENST00000545738 TMOD3Q9NYL9 352 aa21.42■■□□□ 1.02
LIMS2-217ENST00000545738 CABP4P57796 275 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms