RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 KDRP35968 1356 aa25.88■■□□□ 1.73
DDX55-211ENST00000544429 RAPGEF4Q8WZA2 1011 aa25.87■■□□□ 1.73
DDX55-211ENST00000544429 ZCRB1Q8TBF4 217 aaKnown RBP25.85■■□□□ 1.73
DDX55-211ENST00000544429 TATP17735 454 aaPredicted RBP25.84■■□□□ 1.73
DDX55-211ENST00000544429 DIAPH1O60610 1272 aaKnown RBP25.82■■□□□ 1.72
DDX55-211ENST00000544429 RALBP1Q15311 655 aa25.82■■□□□ 1.72
DDX55-211ENST00000544429 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.82■■□□□ 1.72
DDX55-211ENST00000544429 NHSQ6T4R5 1651 aa25.82■■□□□ 1.72
DDX55-211ENST00000544429 TRIM37O94972 964 aa25.79■■□□□ 1.72
DDX55-211ENST00000544429 AEBP1Q8IUX7 1158 aa25.79■■□□□ 1.72
DDX55-211ENST00000544429 SULT6B1Q6IMI4 303 aa25.77■■□□□ 1.72
DDX55-211ENST00000544429 DDX54Q8TDD1 881 aaKnown RBP25.77■■□□□ 1.72
DDX55-211ENST00000544429 PCDH11XQ9BZA7 1347 aa25.77■■□□□ 1.72
DDX55-211ENST00000544429 PCDH11YQ9BZA8 1340 aa25.77■■□□□ 1.72
DDX55-211ENST00000544429 RGPD3A6NKT7 1758 aaPredicted RBP25.77■■□□□ 1.72
DDX55-211ENST00000544429 RGPD4Q7Z3J3 1758 aa25.77■■□□□ 1.72
DDX55-211ENST00000544429 CYP27B1O15528 508 aa25.76■■□□□ 1.71
DDX55-211ENST00000544429 DOT1LQ8TEK3 1739 aa25.76■■□□□ 1.71
DDX55-211ENST00000544429 CFAP53Q96M91 514 aa25.75■■□□□ 1.71
DDX55-211ENST00000544429 BCL11BQ9C0K0 894 aaPredicted RBP25.75■■□□□ 1.71
DDX55-211ENST00000544429 PTF1AQ7RTS3 328 aa25.74■■□□□ 1.71
DDX55-211ENST00000544429 SPG7Q9UQ90 795 aa25.74■■□□□ 1.71
DDX55-211ENST00000544429 TOGARAM1Q9Y4F4 1720 aa25.74■■□□□ 1.71
DDX55-211ENST00000544429 SF3B2Q13435 895 aaKnown RBP25.73■■□□□ 1.71
DDX55-211ENST00000544429 NKX1-1Q15270 411 aaPredicted RBP25.73■■□□□ 1.71
DDX55-211ENST00000544429 DEFB132Q7Z7B7 95 aa25.73■■□□□ 1.71
DDX55-211ENST00000544429 PRKRIP1Q9H875 184 aaPredicted RBP25.73■■□□□ 1.71
DDX55-211ENST00000544429 BTAF1O14981 1849 aa25.72■■□□□ 1.71
DDX55-211ENST00000544429 KAT6BQ8WYB5 2073 aa25.72■■□□□ 1.71
DDX55-211ENST00000544429 MYBBP1AQ9BQG0 1328 aaKnown RBP25.71■■□□□ 1.71
DDX55-211ENST00000544429 KCNQ2O43526 872 aa25.71■■□□□ 1.71
DDX55-211ENST00000544429 BAG6P46379 1132 aa25.7■■□□□ 1.7
DDX55-211ENST00000544429 RREB1Q92766 1687 aa25.7■■□□□ 1.7
DDX55-211ENST00000544429 HMOX1P09601 288 aa25.69■■□□□ 1.7
DDX55-211ENST00000544429 AMOTQ4VCS5 1084 aa25.69■■□□□ 1.7
DDX55-211ENST00000544429 CAMKK2Q96RR4 588 aa25.69■■□□□ 1.7
DDX55-211ENST00000544429 ITGB4P16144 1822 aa25.68■■□□□ 1.7
DDX55-211ENST00000544429 APBA3O96018 575 aa25.68■■□□□ 1.7
DDX55-211ENST00000544429 PHKG2P15735 406 aa25.68■■□□□ 1.7
DDX55-211ENST00000544429 PLSCR1O15162 318 aa25.67■■□□□ 1.7
DDX55-211ENST00000544429 PLEKHO1Q53GL0 409 aaPredicted RBP25.67■■□□□ 1.7
DDX55-211ENST00000544429 ACSBG1Q96GR2 724 aa25.67■■□□□ 1.7
DDX55-211ENST00000544429 U2SURPO15042 1029 aaKnown RBP25.66■■□□□ 1.7
DDX55-211ENST00000544429 EN1Q05925 392 aaPredicted RBP25.66■■□□□ 1.7
DDX55-211ENST00000544429 IFNL2Q8IZJ0 200 aa25.66■■□□□ 1.7
DDX55-211ENST00000544429 NUDCQ9Y266 331 aa25.65■■□□□ 1.7
DDX55-211ENST00000544429 RSPH6AQ9H0K4 717 aa25.64■■□□□ 1.7
DDX55-211ENST00000544429 NUP188Q5SRE5 1749 aa25.63■■□□□ 1.69
DDX55-211ENST00000544429 PRIM1P49642 420 aaKnown RBP25.63■■□□□ 1.69
DDX55-211ENST00000544429 ADAMTS7Q9UKP4 1686 aa25.63■■□□□ 1.69
DDX55-211ENST00000544429 EZH2Q15910 746 aaKnown RBP25.62■■□□□ 1.69
DDX55-211ENST00000544429 ZNF530Q6P9A1 599 aaPredicted RBP25.61■■□□□ 1.69
DDX55-211ENST00000544429 SCN11AQ9UI33 1791 aa25.61■■□□□ 1.69
DDX55-211ENST00000544429 KDM6AO15550 1401 aaPredicted RBP25.61■■□□□ 1.69
DDX55-211ENST00000544429 VIRMAQ69YN4 1812 aaKnown RBP25.6■■□□□ 1.69
DDX55-211ENST00000544429 FCHSD2O94868 740 aa25.6■■□□□ 1.69
DDX55-211ENST00000544429 LY75O60449 1722 aa25.6■■□□□ 1.69
DDX55-211ENST00000544429 U2AF1L5P0DN76 240 aaPredicted RBP25.59■■□□□ 1.69
DDX55-211ENST00000544429 U2AF1Q01081 240 aaKnown RBP eCLIP25.59■■□□□ 1.69
DDX55-211ENST00000544429 MTHFSDQ2M296 383 aaKnown RBP25.58■■□□□ 1.69
DDX55-211ENST00000544429 PROM2Q8N271 834 aa25.58■■□□□ 1.69
DDX55-211ENST00000544429 DCAF5Q96JK2 942 aa25.58■■□□□ 1.69
DDX55-211ENST00000544429 HSP90AB1P08238 724 aaKnown RBP25.57■■□□□ 1.68
DDX55-211ENST00000544429 PRKAR2BP31323 418 aa25.56■■□□□ 1.68
DDX55-211ENST00000544429 AKAP4Q5JQC9 854 aa25.56■■□□□ 1.68
DDX55-211ENST00000544429 C1orf141Q5JVX7 400 aa25.55■■□□□ 1.68
DDX55-211ENST00000544429 PHACTR3Q96KR7 559 aa25.55■■□□□ 1.68
DDX55-211ENST00000544429 ERVV-2B6SEH9 535 aa25.54■■□□□ 1.68
DDX55-211ENST00000544429 SYTL4Q96C24 671 aaPredicted RBP25.54■■□□□ 1.68
DDX55-211ENST00000544429 MRC1P22897 1456 aa25.53■■□□□ 1.68
DDX55-211ENST00000544429 TXNRD1Q16881 649 aa25.52■■□□□ 1.68
DDX55-211ENST00000544429 PIGBQ92521 554 aa25.52■■□□□ 1.68
DDX55-211ENST00000544429 PLEKHF1Q96S99 279 aa25.52■■□□□ 1.68
DDX55-211ENST00000544429 PAPPAQ13219 1627 aa25.52■■□□□ 1.68
DDX55-211ENST00000544429 GAS2L2Q8NHY3 880 aa25.51■■□□□ 1.67
DDX55-211ENST00000544429 MPRIPQ6WCQ1 1025 aa25.5■■□□□ 1.67
DDX55-211ENST00000544429 MAP3K5Q99683 1374 aa25.48■■□□□ 1.67
DDX55-211ENST00000544429 TMOD3Q9NYL9 352 aa25.48■■□□□ 1.67
DDX55-211ENST00000544429 DLG5Q8TDM6 1919 aa25.47■■□□□ 1.67
DDX55-211ENST00000544429 SIPA1L3O60292 1781 aaPredicted RBP25.47■■□□□ 1.67
DDX55-211ENST00000544429 ANP32CO43423 234 aa25.47■■□□□ 1.67
DDX55-211ENST00000544429 LGR6Q9HBX8 967 aa25.47■■□□□ 1.67
DDX55-211ENST00000544429 RNMTO43148 476 aaKnown RBP25.46■■□□□ 1.67
DDX55-211ENST00000544429 LRRC4BQ9NT99 713 aa25.46■■□□□ 1.67
DDX55-211ENST00000544429 CCDC184Q52MB2 194 aa25.45■■□□□ 1.66
DDX55-211ENST00000544429 SLC27A3Q5K4L6 730 aa25.45■■□□□ 1.66
DDX55-211ENST00000544429 ZNF831Q5JPB2 1677 aa25.45■■□□□ 1.66
DDX55-211ENST00000544429 CEMIPQ8WUJ3 1361 aa25.44■■□□□ 1.66
DDX55-211ENST00000544429 PALLDQ8WX93 1383 aa25.44■■□□□ 1.66
DDX55-211ENST00000544429 TAF1LQ8IZX4 1826 aa25.44■■□□□ 1.66
DDX55-211ENST00000544429 GNAT3A8MTJ3 354 aa25.44■■□□□ 1.66
DDX55-211ENST00000544429 IL17REQ8NFR9 667 aa25.43■■□□□ 1.66
DDX55-211ENST00000544429 SMARCC1Q92922 1105 aaPredicted RBP25.43■■□□□ 1.66
DDX55-211ENST00000544429 PNNQ9H307 717 aaKnown RBP25.43■■□□□ 1.66
DDX55-211ENST00000544429 ATG3Q9NT62 314 aa25.43■■□□□ 1.66
DDX55-211ENST00000544429 ASAP1Q9ULH1 1129 aa25.43■■□□□ 1.66
DDX55-211ENST00000544429 CABP4P57796 275 aa25.42■■□□□ 1.66
DDX55-211ENST00000544429 NFATC2IPQ8NCF5 419 aa25.42■■□□□ 1.66
DDX55-211ENST00000544429 SLC52A2Q9HAB3 445 aa25.42■■□□□ 1.66
DDX55-211ENST00000544429 ANO8Q9HCE9 1232 aaPredicted RBP25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms