RNA–Protein interactions for RNA: ENST00000544425.2

SPDEF-202, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPDEF, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-202ENST00000544425 ARHGAP45Q92619 1136 aa20.54■□□□□ 0.88
SPDEF-202ENST00000544425 STRCQ7RTU9 1775 aa20.53■□□□□ 0.88
SPDEF-202ENST00000544425 C8orf58Q8NAV2 365 aa20.53■□□□□ 0.88
SPDEF-202ENST00000544425 MRPL50Q8N5N7 158 aaKnown RBP20.52■□□□□ 0.88
SPDEF-202ENST00000544425 KIAA0232Q92628 1395 aa20.52■□□□□ 0.88
SPDEF-202ENST00000544425 NBPF6Q5VWK0 638 aa20.52■□□□□ 0.87
SPDEF-202ENST00000544425 NBPF4Q96M43 638 aa20.52■□□□□ 0.87
SPDEF-202ENST00000544425 GNAT3A8MTJ3 354 aa20.51■□□□□ 0.87
SPDEF-202ENST00000544425 LTN1O94822 1766 aa20.51■□□□□ 0.87
SPDEF-202ENST00000544425 DDX19BQ9UMR2 479 aa20.49■□□□□ 0.87
SPDEF-202ENST00000544425 ALS2Q96Q42 1657 aa20.49■□□□□ 0.87
SPDEF-202ENST00000544425 BABAM1Q9NWV8 329 aa20.48■□□□□ 0.87
SPDEF-202ENST00000544425 ELL2O00472 640 aaPredicted RBP20.47■□□□□ 0.87
SPDEF-202ENST00000544425 NCAPD2Q15021 1401 aa20.47■□□□□ 0.87
SPDEF-202ENST00000544425 IGHDP01880 384 aa20.47■□□□□ 0.87
SPDEF-202ENST00000544425 ZNF335Q9H4Z2 1342 aaPredicted RBP20.47■□□□□ 0.87
SPDEF-202ENST00000544425 ZBTB7CA1YPR0 619 aa20.46■□□□□ 0.87
SPDEF-202ENST00000544425 ANKRD24Q8TF21 1146 aa20.46■□□□□ 0.87
SPDEF-202ENST00000544425 MAP3K5Q99683 1374 aa20.46■□□□□ 0.87
SPDEF-202ENST00000544425 TNS3Q68CZ2 1445 aa20.46■□□□□ 0.87
SPDEF-202ENST00000544425 SPATA31A3Q5VYP0 1347 aa20.45■□□□□ 0.87
SPDEF-202ENST00000544425 BRINP3Q76B58 766 aa20.45■□□□□ 0.86
SPDEF-202ENST00000544425 USHBP1Q8N6Y0 703 aa20.45■□□□□ 0.86
SPDEF-202ENST00000544425 DDX17Q92841 729 aaKnown RBP20.45■□□□□ 0.86
SPDEF-202ENST00000544425 PXDNQ92626 1479 aa20.45■□□□□ 0.86
SPDEF-202ENST00000544425 TMEM57Q8N5G2 664 aa20.45■□□□□ 0.86
SPDEF-202ENST00000544425 PCDHB15Q9Y5E8 787 aa20.45■□□□□ 0.86
SPDEF-202ENST00000544425 MED1Q15648 1581 aaPredicted RBP20.44■□□□□ 0.86
SPDEF-202ENST00000544425 IL17REQ8NFR9 667 aa20.44■□□□□ 0.86
SPDEF-202ENST00000544425 TSPYL4Q9UJ04 414 aa20.44■□□□□ 0.86
SPDEF-202ENST00000544425 AXIN2Q9Y2T1 843 aa20.44■□□□□ 0.86
SPDEF-202ENST00000544425 AMOTQ4VCS5 1084 aa20.43■□□□□ 0.86
SPDEF-202ENST00000544425 SLAIN2Q9P270 581 aa20.43■□□□□ 0.86
SPDEF-202ENST00000544425 ITPRIPQ8IWB1 547 aa20.43■□□□□ 0.86
SPDEF-202ENST00000544425 LRRC59Q96AG4 307 aaKnown RBP20.43■□□□□ 0.86
SPDEF-202ENST00000544425 CHMP4BQ9H444 224 aaKnown RBP20.43■□□□□ 0.86
SPDEF-202ENST00000544425 RWDD1Q9H446 243 aaPredicted RBP20.43■□□□□ 0.86
SPDEF-202ENST00000544425 XIRP1Q702N8 1843 aaKnown RBP20.42■□□□□ 0.86
SPDEF-202ENST00000544425 PLEKHO1Q53GL0 409 aaPredicted RBP20.42■□□□□ 0.86
SPDEF-202ENST00000544425 API5Q9BZZ5 524 aaKnown RBP20.42■□□□□ 0.86
SPDEF-202ENST00000544425 ZC3H6P61129 1189 aaKnown RBP20.41■□□□□ 0.86
SPDEF-202ENST00000544425 TAF7Q15545 349 aaPredicted RBP20.41■□□□□ 0.86
SPDEF-202ENST00000544425 SOS1Q07889 1333 aaPredicted RBP20.41■□□□□ 0.86
SPDEF-202ENST00000544425 ZBTB40Q9NUA8 1239 aa20.41■□□□□ 0.86
SPDEF-202ENST00000544425 ERBB3P21860 1342 aa20.4■□□□□ 0.86
SPDEF-202ENST00000544425 MIS18AQ9NYP9 233 aa20.4■□□□□ 0.86
SPDEF-202ENST00000544425 CEMIPQ8WUJ3 1361 aa20.4■□□□□ 0.86
SPDEF-202ENST00000544425 KRT24Q2M2I5 525 aa20.39■□□□□ 0.86
SPDEF-202ENST00000544425 AKAP4Q5JQC9 854 aa20.39■□□□□ 0.86
SPDEF-202ENST00000544425 LRRC37A3O60309 1634 aa20.39■□□□□ 0.85
SPDEF-202ENST00000544425 ABCC4O15439 1325 aa20.39■□□□□ 0.85
SPDEF-202ENST00000544425 SOS2Q07890 1332 aaPredicted RBP20.39■□□□□ 0.85
SPDEF-202ENST00000544425 PLEKHG5O94827 1062 aa20.39■□□□□ 0.85
SPDEF-202ENST00000544425 CPDO75976 1380 aa20.37■□□□□ 0.85
SPDEF-202ENST00000544425 HDAC1Q13547 482 aaPredicted RBP20.37■□□□□ 0.85
SPDEF-202ENST00000544425 ABCC6O95255 1503 aa20.37■□□□□ 0.85
SPDEF-202ENST00000544425 ZBTB7BO15156 539 aaPredicted RBP20.37■□□□□ 0.85
SPDEF-202ENST00000544425 PDE4AP27815 886 aa20.37■□□□□ 0.85
SPDEF-202ENST00000544425 CAMTA1Q9Y6Y1 1673 aa20.36■□□□□ 0.85
SPDEF-202ENST00000544425 BACH2Q9BYV9 841 aa20.36■□□□□ 0.85
SPDEF-202ENST00000544425 PTPRCP08575 1304 aa20.36■□□□□ 0.85
SPDEF-202ENST00000544425 PLEKHG2Q9H7P9 1386 aa20.35■□□□□ 0.85
SPDEF-202ENST00000544425 ZNF530Q6P9A1 599 aaPredicted RBP20.35■□□□□ 0.85
SPDEF-202ENST00000544425 SKAP1Q86WV1 359 aa20.35■□□□□ 0.85
SPDEF-202ENST00000544425 CABLES1Q8TDN4 633 aa20.34■□□□□ 0.85
SPDEF-202ENST00000544425 INTS3Q68E01 1043 aaKnown RBP20.33■□□□□ 0.84
SPDEF-202ENST00000544425 LGR6Q9HBX8 967 aa20.33■□□□□ 0.84
SPDEF-202ENST00000544425 LMO7Q8WWI1 1683 aa20.32■□□□□ 0.84
SPDEF-202ENST00000544425 SLC4A2P04920 1241 aa20.32■□□□□ 0.84
SPDEF-202ENST00000544425 C1orf141Q5JVX7 400 aa20.32■□□□□ 0.84
SPDEF-202ENST00000544425 OVOS2A0A0G2JMS6 1433 aa20.32■□□□□ 0.84
SPDEF-202ENST00000544425 CCDC30Q5VVM6 783 aa20.3■□□□□ 0.84
SPDEF-202ENST00000544425 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.3■□□□□ 0.84
SPDEF-202ENST00000544425 COL18A1P39060 1754 aa20.3■□□□□ 0.84
SPDEF-202ENST00000544425 RNMTO43148 476 aaKnown RBP20.3■□□□□ 0.84
SPDEF-202ENST00000544425 RAPGEF4Q8WZA2 1011 aa20.29■□□□□ 0.84
SPDEF-202ENST00000544425 CHMP4AQ9BY43 222 aa20.29■□□□□ 0.84
SPDEF-202ENST00000544425 NLRP2Q9NX02 1062 aa20.29■□□□□ 0.84
SPDEF-202ENST00000544425 RGPD2P0DJD1 1756 aa20.29■□□□□ 0.84
SPDEF-202ENST00000544425 CRYBG1Q9Y4K1 1723 aa20.29■□□□□ 0.84
SPDEF-202ENST00000544425 RGS12O14924 1447 aa20.28■□□□□ 0.84
SPDEF-202ENST00000544425 RGS3P49796 1198 aa20.28■□□□□ 0.84
SPDEF-202ENST00000544425 TEFQ10587 303 aa20.28■□□□□ 0.84
SPDEF-202ENST00000544425 HOXB7P09629 217 aa20.28■□□□□ 0.84
SPDEF-202ENST00000544425 SMC5Q8IY18 1101 aa20.28■□□□□ 0.84
SPDEF-202ENST00000544425 STK31Q9BXU1 1019 aa20.28■□□□□ 0.84
SPDEF-202ENST00000544425 TATP17735 454 aaPredicted RBP20.27■□□□□ 0.84
SPDEF-202ENST00000544425 CHRNA2Q15822 529 aa20.27■□□□□ 0.84
SPDEF-202ENST00000544425 MPRIPQ6WCQ1 1025 aa20.27■□□□□ 0.84
SPDEF-202ENST00000544425 PDZRN3Q9UPQ7 1066 aa20.27■□□□□ 0.84
SPDEF-202ENST00000544425 EIF4A1P60842 406 aaKnown RBP20.26■□□□□ 0.83
SPDEF-202ENST00000544425 FAM161AQ3B820 660 aa20.26■□□□□ 0.83
SPDEF-202ENST00000544425 CSB-PGBD3P0DP91 1061 aa20.26■□□□□ 0.83
SPDEF-202ENST00000544425 SPG7Q9UQ90 795 aa20.25■□□□□ 0.83
SPDEF-202ENST00000544425 BTBD11A6QL63 1104 aa20.24■□□□□ 0.83
SPDEF-202ENST00000544425 AEBP2Q6ZN18 517 aaPredicted RBP20.23■□□□□ 0.83
SPDEF-202ENST00000544425 G2E3Q7L622 706 aa20.23■□□□□ 0.83
SPDEF-202ENST00000544425 RGPD5Q99666 1765 aa20.23■□□□□ 0.83
SPDEF-202ENST00000544425 PRDM11Q9NQV5 511 aa20.22■□□□□ 0.83
SPDEF-202ENST00000544425 FAM208AQ9UK61 1670 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms