RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 PTF1AQ7RTS3 328 aa29.54■■■□□ 2.32
OTUB1-212ENST00000543988 SHANK3Q9BYB0 1731 aa29.53■■■□□ 2.32
OTUB1-212ENST00000543988 IL13P35225 146 aa29.51■■■□□ 2.31
OTUB1-212ENST00000543988 BCL11BQ9C0K0 894 aaPredicted RBP29.51■■■□□ 2.31
OTUB1-212ENST00000543988 SBF2Q86WG5 1849 aa29.5■■■□□ 2.31
OTUB1-212ENST00000543988 DDX10Q13206 875 aaKnown RBP29.49■■■□□ 2.31
OTUB1-212ENST00000543988 ACSBG1Q96GR2 724 aa29.49■■■□□ 2.31
OTUB1-212ENST00000543988 KCNQ2O43526 872 aa29.48■■■□□ 2.31
OTUB1-212ENST00000543988 CAMKK2Q96RR4 588 aa29.48■■■□□ 2.31
OTUB1-212ENST00000543988 COL3A1P02461 1466 aaPredicted RBP29.48■■■□□ 2.31
OTUB1-212ENST00000543988 PCDH11XQ9BZA7 1347 aa29.47■■■□□ 2.31
OTUB1-212ENST00000543988 PCDH11YQ9BZA8 1340 aa29.47■■■□□ 2.31
OTUB1-212ENST00000543988 EZH2Q15910 746 aaKnown RBP29.47■■■□□ 2.31
OTUB1-212ENST00000543988 AEBP1Q8IUX7 1158 aa29.47■■■□□ 2.31
OTUB1-212ENST00000543988 NHSQ6T4R5 1651 aa29.47■■■□□ 2.31
OTUB1-212ENST00000543988 PKD1L3Q7Z443 1732 aa29.46■■■□□ 2.31
OTUB1-212ENST00000543988 PARD3Q8TEW0 1356 aa29.45■■■□□ 2.31
OTUB1-212ENST00000543988 CYP27B1O15528 508 aa29.43■■■□□ 2.3
OTUB1-212ENST00000543988 PPP2R1AP30153 589 aa29.43■■■□□ 2.3
OTUB1-212ENST00000543988 KDRP35968 1356 aa29.42■■■□□ 2.3
OTUB1-212ENST00000543988 PLEKHG2Q9H7P9 1386 aa29.42■■■□□ 2.3
OTUB1-212ENST00000543988 DIAPH1O60610 1272 aaKnown RBP29.42■■■□□ 2.3
OTUB1-212ENST00000543988 SPG7Q9UQ90 795 aa29.42■■■□□ 2.3
OTUB1-212ENST00000543988 SULT6B1Q6IMI4 303 aa29.41■■■□□ 2.3
OTUB1-212ENST00000543988 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.41■■■□□ 2.3
OTUB1-212ENST00000543988 DOT1LQ8TEK3 1739 aa29.38■■■□□ 2.29
OTUB1-212ENST00000543988 PLSCR1O15162 318 aa29.37■■■□□ 2.29
OTUB1-212ENST00000543988 PRIM1P49642 420 aaKnown RBP29.37■■■□□ 2.29
OTUB1-212ENST00000543988 RREB1Q92766 1687 aa29.37■■■□□ 2.29
OTUB1-212ENST00000543988 RGPD3A6NKT7 1758 aaPredicted RBP29.36■■■□□ 2.29
OTUB1-212ENST00000543988 RGPD4Q7Z3J3 1758 aa29.36■■■□□ 2.29
OTUB1-212ENST00000543988 SYTL4Q96C24 671 aaPredicted RBP29.35■■■□□ 2.29
OTUB1-212ENST00000543988 CFAP53Q96M91 514 aa29.35■■■□□ 2.29
OTUB1-212ENST00000543988 HMOX1P09601 288 aa29.34■■■□□ 2.29
OTUB1-212ENST00000543988 PHKG2P15735 406 aa29.33■■■□□ 2.29
OTUB1-212ENST00000543988 BTAF1O14981 1849 aa29.32■■■□□ 2.28
OTUB1-212ENST00000543988 NKX1-1Q15270 411 aaPredicted RBP29.32■■■□□ 2.28
OTUB1-212ENST00000543988 PLEKHO1Q53GL0 409 aaPredicted RBP29.32■■■□□ 2.28
OTUB1-212ENST00000543988 NUP188Q5SRE5 1749 aa29.31■■■□□ 2.28
OTUB1-212ENST00000543988 U2SURPO15042 1029 aaKnown RBP29.3■■■□□ 2.28
OTUB1-212ENST00000543988 AMOTQ4VCS5 1084 aa29.3■■■□□ 2.28
OTUB1-212ENST00000543988 ZNF530Q6P9A1 599 aaPredicted RBP29.3■■■□□ 2.28
OTUB1-212ENST00000543988 IFNL2Q8IZJ0 200 aa29.3■■■□□ 2.28
OTUB1-212ENST00000543988 PROM2Q8N271 834 aa29.3■■■□□ 2.28
OTUB1-212ENST00000543988 TOGARAM1Q9Y4F4 1720 aa29.3■■■□□ 2.28
OTUB1-212ENST00000543988 TXNRD1Q16881 649 aa29.28■■■□□ 2.28
OTUB1-212ENST00000543988 RALBP1Q15311 655 aa29.27■■■□□ 2.28
OTUB1-212ENST00000543988 ZNF316A6NFI3 1004 aaPredicted RBP29.26■■■□□ 2.27
OTUB1-212ENST00000543988 PSDA5PKW4 1024 aaPredicted RBP29.25■■■□□ 2.27
OTUB1-212ENST00000543988 KDM6AO15550 1401 aaPredicted RBP29.23■■■□□ 2.27
OTUB1-212ENST00000543988 R3HDM1Q15032 1099 aaKnown RBP29.23■■■□□ 2.27
OTUB1-212ENST00000543988 MPRIPQ6WCQ1 1025 aa29.23■■■□□ 2.27
OTUB1-212ENST00000543988 ANO8Q9HCE9 1232 aaPredicted RBP29.22■■■□□ 2.27
OTUB1-212ENST00000543988 NUDCQ9Y266 331 aa29.22■■■□□ 2.27
OTUB1-212ENST00000543988 KAT6BQ8WYB5 2073 aa29.21■■■□□ 2.27
OTUB1-212ENST00000543988 C1orf141Q5JVX7 400 aa29.21■■■□□ 2.27
OTUB1-212ENST00000543988 HSP90AB1P08238 724 aaKnown RBP29.2■■■□□ 2.26
OTUB1-212ENST00000543988 NBPF14Q5TI25 921 aa29.19■■■□□ 2.26
OTUB1-212ENST00000543988 PIGBQ92521 554 aa29.19■■■□□ 2.26
OTUB1-212ENST00000543988 DCAF5Q96JK2 942 aa29.19■■■□□ 2.26
OTUB1-212ENST00000543988 U2AF1L5P0DN76 240 aaPredicted RBP29.18■■■□□ 2.26
OTUB1-212ENST00000543988 U2AF1Q01081 240 aaKnown RBP eCLIP29.18■■■□□ 2.26
OTUB1-212ENST00000543988 RSPH6AQ9H0K4 717 aa29.18■■■□□ 2.26
OTUB1-212ENST00000543988 LRRC4BQ9NT99 713 aa29.18■■■□□ 2.26
OTUB1-212ENST00000543988 MYBBP1AQ9BQG0 1328 aaKnown RBP29.18■■■□□ 2.26
OTUB1-212ENST00000543988 MTHFSDQ2M296 383 aaKnown RBP29.17■■■□□ 2.26
OTUB1-212ENST00000543988 TMOD3Q9NYL9 352 aa29.17■■■□□ 2.26
OTUB1-212ENST00000543988 PALLDQ8WX93 1383 aa29.15■■■□□ 2.26
OTUB1-212ENST00000543988 PRKAR2BP31323 418 aa29.15■■■□□ 2.26
OTUB1-212ENST00000543988 AKAP4Q5JQC9 854 aa29.15■■■□□ 2.26
OTUB1-212ENST00000543988 PAPPAQ13219 1627 aa29.15■■■□□ 2.26
OTUB1-212ENST00000543988 ERVV-2B6SEH9 535 aa29.14■■■□□ 2.26
OTUB1-212ENST00000543988 SLC27A3Q5K4L6 730 aa29.14■■■□□ 2.26
OTUB1-212ENST00000543988 PRKRIP1Q9H875 184 aaPredicted RBP29.14■■■□□ 2.26
OTUB1-212ENST00000543988 ITGB4P16144 1822 aa29.14■■■□□ 2.26
OTUB1-212ENST00000543988 KCNQ4P56696 695 aa29.13■■■□□ 2.25
OTUB1-212ENST00000543988 LY75O60449 1722 aa29.12■■■□□ 2.25
OTUB1-212ENST00000543988 CCNL1Q9UK58 526 aaPredicted RBP29.11■■■□□ 2.25
OTUB1-212ENST00000543988 SMARCC1Q92922 1105 aaPredicted RBP29.1■■■□□ 2.25
OTUB1-212ENST00000543988 PHACTR3Q96KR7 559 aa29.1■■■□□ 2.25
OTUB1-212ENST00000543988 STK32BQ9NY57 414 aa29.1■■■□□ 2.25
OTUB1-212ENST00000543988 FCHSD2O94868 740 aa29.09■■■□□ 2.25
OTUB1-212ENST00000543988 CABP4P57796 275 aa29.09■■■□□ 2.25
OTUB1-212ENST00000543988 ASAP1Q9ULH1 1129 aa29.09■■■□□ 2.25
OTUB1-212ENST00000543988 ZNF827Q17R98 1081 aa29.08■■■□□ 2.25
OTUB1-212ENST00000543988 GAS2L2Q8NHY3 880 aa29.08■■■□□ 2.25
OTUB1-212ENST00000543988 SLC15A2Q16348 729 aa29.07■■■□□ 2.24
OTUB1-212ENST00000543988 MAP3K5Q99683 1374 aa29.07■■■□□ 2.24
OTUB1-212ENST00000543988 LGR6Q9HBX8 967 aa29.06■■■□□ 2.24
OTUB1-212ENST00000543988 ATG3Q9NT62 314 aa29.06■■■□□ 2.24
OTUB1-212ENST00000543988 SRCAPQ6ZRS2 3230 aa29.06■■■□□ 2.24
OTUB1-212ENST00000543988 MRC1P22897 1456 aa29.05■■■□□ 2.24
OTUB1-212ENST00000543988 RNMTO43148 476 aaKnown RBP29.05■■■□□ 2.24
OTUB1-212ENST00000543988 ADAMTS7Q9UKP4 1686 aa29.03■■■□□ 2.24
OTUB1-212ENST00000543988 NFATC2IPQ8NCF5 419 aa29.03■■■□□ 2.24
OTUB1-212ENST00000543988 AKT1S1Q96B36 256 aa29.03■■■□□ 2.24
OTUB1-212ENST00000543988 SCN11AQ9UI33 1791 aa29.02■■■□□ 2.24
OTUB1-212ENST00000543988 LOC102724428A0A0B4J2F2 783 aa29.01■■■□□ 2.23
OTUB1-212ENST00000543988 GNAT3A8MTJ3 354 aa29.01■■■□□ 2.23
OTUB1-212ENST00000543988 SIK1P57059 783 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms