RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 RAPGEF4Q8WZA2 1011 aa20.88■□□□□ 0.93
XRCC1-202ENST00000543982 NGLY1Q96IV0 654 aa20.88■□□□□ 0.93
XRCC1-202ENST00000543982 PLEKHO1Q53GL0 409 aaPredicted RBP20.87■□□□□ 0.93
XRCC1-202ENST00000543982 IL17REQ8NFR9 667 aa20.87■□□□□ 0.93
XRCC1-202ENST00000543982 CRB1P82279 1406 aa20.87■□□□□ 0.93
XRCC1-202ENST00000543982 TATP17735 454 aaPredicted RBP20.86■□□□□ 0.93
XRCC1-202ENST00000543982 ZNF530Q6P9A1 599 aaPredicted RBP20.86■□□□□ 0.93
XRCC1-202ENST00000543982 TSR2Q969E8 191 aaKnown RBP20.86■□□□□ 0.93
XRCC1-202ENST00000543982 LGR6Q9HBX8 967 aa20.86■□□□□ 0.93
XRCC1-202ENST00000543982 BCL9LQ86UU0 1499 aa20.85■□□□□ 0.93
XRCC1-202ENST00000543982 E9PSI1 815 aa20.85■□□□□ 0.93
XRCC1-202ENST00000543982 GNAT3A8MTJ3 354 aa20.85■□□□□ 0.93
XRCC1-202ENST00000543982 FNBP4Q8N3X1 1017 aaPredicted RBP20.85■□□□□ 0.93
XRCC1-202ENST00000543982 PLCH1Q4KWH8 1693 aa20.85■□□□□ 0.93
XRCC1-202ENST00000543982 DLG5Q8TDM6 1919 aa20.84■□□□□ 0.93
XRCC1-202ENST00000543982 AMOTQ4VCS5 1084 aa20.84■□□□□ 0.93
XRCC1-202ENST00000543982 CYP27B1O15528 508 aa20.83■□□□□ 0.93
XRCC1-202ENST00000543982 MAP3K5Q99683 1374 aa20.83■□□□□ 0.93
XRCC1-202ENST00000543982 ZNF853P0CG23 659 aa20.83■□□□□ 0.92
XRCC1-202ENST00000543982 UNC5CLQ8IV45 518 aa20.83■□□□□ 0.92
XRCC1-202ENST00000543982 LAS1LQ9Y4W2 734 aaKnown RBP20.83■□□□□ 0.92
XRCC1-202ENST00000543982 OVOS2A0A0G2JMS6 1433 aa20.82■□□□□ 0.92
XRCC1-202ENST00000543982 IL2RBP14784 551 aa20.82■□□□□ 0.92
XRCC1-202ENST00000543982 MPRIPQ6WCQ1 1025 aa20.82■□□□□ 0.92
XRCC1-202ENST00000543982 NRAPQ86VF7 1730 aa20.82■□□□□ 0.92
XRCC1-202ENST00000543982 SPATA31A1Q5TZJ5 1347 aa20.82■□□□□ 0.92
XRCC1-202ENST00000543982 LMOD3Q0VAK6 560 aa20.81■□□□□ 0.92
XRCC1-202ENST00000543982 AKAP4Q5JQC9 854 aa20.81■□□□□ 0.92
XRCC1-202ENST00000543982 MIS18AQ9NYP9 233 aa20.81■□□□□ 0.92
XRCC1-202ENST00000543982 IL16Q14005 1332 aa20.81■□□□□ 0.92
XRCC1-202ENST00000543982 SPATA31A5Q5VU36 1347 aa20.8■□□□□ 0.92
XRCC1-202ENST00000543982 SPATA31A7Q8IWB4 1347 aa20.8■□□□□ 0.92
XRCC1-202ENST00000543982 FANCIQ9NVI1 1328 aa20.8■□□□□ 0.92
XRCC1-202ENST00000543982 RTF1Q92541 710 aaKnown RBP20.8■□□□□ 0.92
XRCC1-202ENST00000543982 HTATSF1O43719 755 aaKnown RBP20.79■□□□□ 0.92
XRCC1-202ENST00000543982 PHKG2P15735 406 aa20.79■□□□□ 0.92
XRCC1-202ENST00000543982 MEX3CQ5U5Q3 659 aaKnown RBP20.79■□□□□ 0.92
XRCC1-202ENST00000543982 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.79■□□□□ 0.92
XRCC1-202ENST00000543982 DISP2A7MBM2 1401 aa20.79■□□□□ 0.92
XRCC1-202ENST00000543982 ZCRB1Q8TBF4 217 aaKnown RBP20.79■□□□□ 0.92
XRCC1-202ENST00000543982 MBIPQ9NS73 344 aa20.79■□□□□ 0.92
XRCC1-202ENST00000543982 SPG7Q9UQ90 795 aa20.79■□□□□ 0.92
XRCC1-202ENST00000543982 SUPT16HQ9Y5B9 1047 aaKnown RBP20.79■□□□□ 0.92
XRCC1-202ENST00000543982 FBXO41Q8TF61 875 aa20.78■□□□□ 0.92
XRCC1-202ENST00000543982 USP21Q9UK80 565 aa20.78■□□□□ 0.92
XRCC1-202ENST00000543982 RNMTO43148 476 aaKnown RBP20.77■□□□□ 0.92
XRCC1-202ENST00000543982 CCDC9Q9Y3X0 531 aaKnown RBP20.77■□□□□ 0.92
XRCC1-202ENST00000543982 AFF2P51816 1311 aa20.77■□□□□ 0.92
XRCC1-202ENST00000543982 C1orf141Q5JVX7 400 aa20.77■□□□□ 0.92
XRCC1-202ENST00000543982 CFAP44Q96MT7 982 aa20.77■□□□□ 0.92
XRCC1-202ENST00000543982 IFT57Q9NWB7 429 aa20.77■□□□□ 0.92
XRCC1-202ENST00000543982 CEMIPQ8WUJ3 1361 aa20.77■□□□□ 0.91
XRCC1-202ENST00000543982 CHL1O00533 1208 aa20.76■□□□□ 0.91
XRCC1-202ENST00000543982 EXOSC9Q06265 439 aaKnown RBP20.76■□□□□ 0.91
XRCC1-202ENST00000543982 VPS72Q15906 364 aa20.76■□□□□ 0.91
XRCC1-202ENST00000543982 MYH16Q9H6N6 1097 aa20.76■□□□□ 0.91
XRCC1-202ENST00000543982 DDX54Q8TDD1 881 aaKnown RBP20.76■□□□□ 0.91
XRCC1-202ENST00000543982 KDM6AO15550 1401 aaPredicted RBP20.75■□□□□ 0.91
XRCC1-202ENST00000543982 KRT24Q2M2I5 525 aa20.74■□□□□ 0.91
XRCC1-202ENST00000543982 IFNL2Q8IZJ0 200 aa20.74■□□□□ 0.91
XRCC1-202ENST00000543982 NWD2Q9ULI1 1742 aa20.74■□□□□ 0.91
XRCC1-202ENST00000543982 GNAI1P63096 354 aa20.74■□□□□ 0.91
XRCC1-202ENST00000543982 TSPYL6Q8N831 410 aa20.74■□□□□ 0.91
XRCC1-202ENST00000543982 RCAN3Q9UKA8 241 aa20.74■□□□□ 0.91
XRCC1-202ENST00000543982 CALD1Q05682 793 aaKnown RBP20.72■□□□□ 0.91
XRCC1-202ENST00000543982 PKD1L3Q7Z443 1732 aa20.72■□□□□ 0.91
XRCC1-202ENST00000543982 FAM98CQ17RN3 349 aaKnown RBP20.72■□□□□ 0.91
XRCC1-202ENST00000543982 C8orf58Q8NAV2 365 aa20.72■□□□□ 0.91
XRCC1-202ENST00000543982 KCNQ3O43525 872 aa20.71■□□□□ 0.91
XRCC1-202ENST00000543982 THRAP3Q9Y2W1 955 aaKnown RBP20.71■□□□□ 0.91
XRCC1-202ENST00000543982 PLEKHG2Q9H7P9 1386 aa20.71■□□□□ 0.91
XRCC1-202ENST00000543982 TAF7Q15545 349 aaPredicted RBP20.7■□□□□ 0.9
XRCC1-202ENST00000543982 BARGINQ6ZT62 677 aa20.7■□□□□ 0.9
XRCC1-202ENST00000543982 PCDH11XQ9BZA7 1347 aa20.7■□□□□ 0.9
XRCC1-202ENST00000543982 PCDH11YQ9BZA8 1340 aa20.7■□□□□ 0.9
XRCC1-202ENST00000543982 ELL2O00472 640 aaPredicted RBP20.7■□□□□ 0.9
XRCC1-202ENST00000543982 LRRC37A3O60309 1634 aa20.69■□□□□ 0.9
XRCC1-202ENST00000543982 PARP4Q9UKK3 1724 aaKnown RBP20.68■□□□□ 0.9
XRCC1-202ENST00000543982 NKX1-1Q15270 411 aaPredicted RBP20.68■□□□□ 0.9
XRCC1-202ENST00000543982 TSPYL4Q9UJ04 414 aa20.68■□□□□ 0.9
XRCC1-202ENST00000543982 SHANK3Q9BYB0 1731 aa20.68■□□□□ 0.9
XRCC1-202ENST00000543982 EXOC5O00471 708 aa20.68■□□□□ 0.9
XRCC1-202ENST00000543982 BCAR3O75815 825 aa20.68■□□□□ 0.9
XRCC1-202ENST00000543982 NEFLP07196 543 aa20.68■□□□□ 0.9
XRCC1-202ENST00000543982 DCAF5Q96JK2 942 aa20.68■□□□□ 0.9
XRCC1-202ENST00000543982 NFATC2IPQ8NCF5 419 aa20.67■□□□□ 0.9
XRCC1-202ENST00000543982 GJD4Q96KN9 370 aaPredicted RBP20.66■□□□□ 0.9
XRCC1-202ENST00000543982 RNF123Q5XPI4 1314 aa20.66■□□□□ 0.9
XRCC1-202ENST00000543982 ADAMTS7Q9UKP4 1686 aa20.66■□□□□ 0.9
XRCC1-202ENST00000543982 VAMP4O75379 141 aa20.66■□□□□ 0.9
XRCC1-202ENST00000543982 IRX6P78412 446 aaPredicted RBP20.66■□□□□ 0.9
XRCC1-202ENST00000543982 TEFQ10587 303 aa20.66■□□□□ 0.9
XRCC1-202ENST00000543982 SLC52A2Q9HAB3 445 aa20.66■□□□□ 0.9
XRCC1-202ENST00000543982 ATRNO75882 1429 aa20.66■□□□□ 0.9
XRCC1-202ENST00000543982 PLIN1O60240 522 aa20.65■□□□□ 0.9
XRCC1-202ENST00000543982 RARSP54136 660 aaKnown RBP20.65■□□□□ 0.9
XRCC1-202ENST00000543982 MARCH10Q8NA82 808 aaPredicted RBP20.65■□□□□ 0.9
XRCC1-202ENST00000543982 QTRT2Q9H974 415 aaKnown RBP20.65■□□□□ 0.9
XRCC1-202ENST00000543982 DDB1Q16531 1140 aa20.65■□□□□ 0.9
XRCC1-202ENST00000543982 BCL2L13Q9BXK5 485 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms