RNA–Protein interactions for RNA: ENST00000543949.2

COMMD5-207, Transcript of COMM domain containing 5, humanhuman

APPRIS P1 TSL 3 BASIC

Gene COMMD5, Length 1,571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD5-207ENST00000543949 IL16Q14005 1332 aa27.68■■■□□ 2.02
COMMD5-207ENST00000543949 TATP17735 454 aaPredicted RBP27.67■■■□□ 2.02
COMMD5-207ENST00000543949 LARP1Q6PKG0 1096 aaKnown RBP27.67■■■□□ 2.02
COMMD5-207ENST00000543949 RTF1Q92541 710 aaKnown RBP27.65■■■□□ 2.02
COMMD5-207ENST00000543949 MEGF6O75095 1541 aa27.65■■■□□ 2.02
COMMD5-207ENST00000543949 MAP3K5Q99683 1374 aa27.65■■■□□ 2.02
COMMD5-207ENST00000543949 HTATSF1O43719 755 aaKnown RBP27.65■■■□□ 2.02
COMMD5-207ENST00000543949 DUSP27Q5VZP5 1158 aa27.65■■■□□ 2.02
COMMD5-207ENST00000543949 TRMT2AQ8IZ69 625 aaKnown RBP27.65■■■□□ 2.02
COMMD5-207ENST00000543949 SPINK5Q9NQ38 1064 aaPredicted RBP27.65■■■□□ 2.02
COMMD5-207ENST00000543949 MYH16Q9H6N6 1097 aa27.64■■■□□ 2.01
COMMD5-207ENST00000543949 GNAT3A8MTJ3 354 aa27.63■■■□□ 2.01
COMMD5-207ENST00000543949 SLIT2O94813 1529 aa27.63■■■□□ 2.01
COMMD5-207ENST00000543949 PKD1L3Q7Z443 1732 aa27.63■■■□□ 2.01
COMMD5-207ENST00000543949 LRP6O75581 1613 aa27.62■■■□□ 2.01
COMMD5-207ENST00000543949 ZNF530Q6P9A1 599 aaPredicted RBP27.61■■■□□ 2.01
COMMD5-207ENST00000543949 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.61■■■□□ 2.01
COMMD5-207ENST00000543949 SPG7Q9UQ90 795 aa27.6■■■□□ 2.01
COMMD5-207ENST00000543949 C1orf141Q5JVX7 400 aa27.6■■■□□ 2.01
COMMD5-207ENST00000543949 THUMPD2Q9BTF0 503 aaKnown RBP27.6■■■□□ 2.01
COMMD5-207ENST00000543949 OVOS2A0A0G2JMS6 1433 aa27.59■■■□□ 2.01
COMMD5-207ENST00000543949 DCTN1Q14203 1278 aa27.59■■■□□ 2.01
COMMD5-207ENST00000543949 AKAP4Q5JQC9 854 aa27.59■■■□□ 2.01
COMMD5-207ENST00000543949 IL2RBP14784 551 aa27.58■■■□□ 2.01
COMMD5-207ENST00000543949 MCM10Q7L590 875 aa27.58■■■□□ 2.01
COMMD5-207ENST00000543949 C8orf37Q96NL8 207 aa27.58■■■□□ 2.01
COMMD5-207ENST00000543949 LRRC37A3O60309 1634 aa27.58■■■□□ 2.01
COMMD5-207ENST00000543949 NGLY1Q96IV0 654 aa27.57■■■□□ 2
COMMD5-207ENST00000543949 GNAI1P63096 354 aa27.56■■■□□ 2
COMMD5-207ENST00000543949 IFT57Q9NWB7 429 aa27.56■■■□□ 2
COMMD5-207ENST00000543949 VIRMAQ69YN4 1812 aaKnown RBP27.56■■■□□ 2
COMMD5-207ENST00000543949 WNK3Q9BYP7 1800 aa27.56■■■□□ 2
COMMD5-207ENST00000543949 USP35Q9P2H5 1018 aa27.56■■■□□ 2
COMMD5-207ENST00000543949 MEX3CQ5U5Q3 659 aaKnown RBP27.55■■■□□ 2
COMMD5-207ENST00000543949 LAS1LQ9Y4W2 734 aaKnown RBP27.54■■■□□ 2
COMMD5-207ENST00000543949 FANCIQ9NVI1 1328 aa27.54■■■□□ 2
COMMD5-207ENST00000543949 CFAP44Q96MT7 982 aa27.53■■■□□ 2
COMMD5-207ENST00000543949 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.53■■■□□ 2
COMMD5-207ENST00000543949 UNC5CLQ8IV45 518 aa27.52■■■□□ 2
COMMD5-207ENST00000543949 TSR2Q969E8 191 aaKnown RBP27.52■■■□□ 2
COMMD5-207ENST00000543949 ZNF853P0CG23 659 aa27.51■■□□□ 1.99
COMMD5-207ENST00000543949 IFNL2Q8IZJ0 200 aa27.51■■□□□ 1.99
COMMD5-207ENST00000543949 FNBP4Q8N3X1 1017 aaPredicted RBP27.51■■□□□ 1.99
COMMD5-207ENST00000543949 RCAN3Q9UKA8 241 aa27.51■■□□□ 1.99
COMMD5-207ENST00000543949 IL17REQ8NFR9 667 aa27.5■■□□□ 1.99
COMMD5-207ENST00000543949 ZCRB1Q8TBF4 217 aaKnown RBP27.5■■□□□ 1.99
COMMD5-207ENST00000543949 THRAP3Q9Y2W1 955 aaKnown RBP27.5■■□□□ 1.99
COMMD5-207ENST00000543949 SPATA31A1Q5TZJ5 1347 aa27.5■■□□□ 1.99
COMMD5-207ENST00000543949 PCDH11XQ9BZA7 1347 aa27.5■■□□□ 1.99
COMMD5-207ENST00000543949 PCDH11YQ9BZA8 1340 aa27.5■■□□□ 1.99
COMMD5-207ENST00000543949 CEMIPQ8WUJ3 1361 aa27.5■■□□□ 1.99
COMMD5-207ENST00000543949 ADAMTS7Q9UKP4 1686 aa27.5■■□□□ 1.99
COMMD5-207ENST00000543949 BCL9LQ86UU0 1499 aa27.49■■□□□ 1.99
COMMD5-207ENST00000543949 SUPT16HQ9Y5B9 1047 aaKnown RBP27.49■■□□□ 1.99
COMMD5-207ENST00000543949 DISP2A7MBM2 1401 aa27.49■■□□□ 1.99
COMMD5-207ENST00000543949 PHKG2P15735 406 aa27.48■■□□□ 1.99
COMMD5-207ENST00000543949 CCDC9Q9Y3X0 531 aaKnown RBP27.48■■□□□ 1.99
COMMD5-207ENST00000543949 SHANK3Q9BYB0 1731 aa27.48■■□□□ 1.99
COMMD5-207ENST00000543949 SCN11AQ9UI33 1791 aa27.48■■□□□ 1.99
COMMD5-207ENST00000543949 SPATA31A5Q5VU36 1347 aa27.47■■□□□ 1.99
COMMD5-207ENST00000543949 SPATA31A7Q8IWB4 1347 aa27.47■■□□□ 1.99
COMMD5-207ENST00000543949 HSP90AB1P08238 724 aaKnown RBP27.47■■□□□ 1.99
COMMD5-207ENST00000543949 MPRIPQ6WCQ1 1025 aa27.47■■□□□ 1.99
COMMD5-207ENST00000543949 CDCA7Q9BWT1 371 aaPredicted RBP27.47■■□□□ 1.99
COMMD5-207ENST00000543949 MBIPQ9NS73 344 aa27.47■■□□□ 1.99
COMMD5-207ENST00000543949 USP21Q9UK80 565 aa27.46■■□□□ 1.99
COMMD5-207ENST00000543949 CHL1O00533 1208 aa27.45■■□□□ 1.99
COMMD5-207ENST00000543949 RNMTO43148 476 aaKnown RBP27.45■■□□□ 1.99
COMMD5-207ENST00000543949 CYP27B1O15528 508 aa27.44■■□□□ 1.98
COMMD5-207ENST00000543949 CT47B1P0C2W7 299 aaPredicted RBP27.44■■□□□ 1.98
COMMD5-207ENST00000543949 VPS72Q15906 364 aa27.44■■□□□ 1.98
COMMD5-207ENST00000543949 LGR6Q9HBX8 967 aa27.44■■□□□ 1.98
COMMD5-207ENST00000543949 EXOSC9Q06265 439 aaKnown RBP27.43■■□□□ 1.98
COMMD5-207ENST00000543949 TEFQ10587 303 aa27.43■■□□□ 1.98
COMMD5-207ENST00000543949 BABAM1Q9NWV8 329 aa27.43■■□□□ 1.98
COMMD5-207ENST00000543949 TAF7Q15545 349 aaPredicted RBP27.43■■□□□ 1.98
COMMD5-207ENST00000543949 FBXO41Q8TF61 875 aa27.42■■□□□ 1.98
COMMD5-207ENST00000543949 DCAF5Q96JK2 942 aa27.42■■□□□ 1.98
COMMD5-207ENST00000543949 TSPYL4Q9UJ04 414 aa27.42■■□□□ 1.98
COMMD5-207ENST00000543949 SIPA1L3O60292 1781 aaPredicted RBP27.41■■□□□ 1.98
COMMD5-207ENST00000543949 BARGINQ6ZT62 677 aa27.41■■□□□ 1.98
COMMD5-207ENST00000543949 KDM6AO15550 1401 aaPredicted RBP27.41■■□□□ 1.98
COMMD5-207ENST00000543949 AFF2P51816 1311 aa27.4■■□□□ 1.98
COMMD5-207ENST00000543949 NEFLP07196 543 aa27.39■■□□□ 1.98
COMMD5-207ENST00000543949 TNS2Q63HR2 1409 aa27.39■■□□□ 1.97
COMMD5-207ENST00000543949 EXOC5O00471 708 aa27.38■■□□□ 1.97
COMMD5-207ENST00000543949 DDX54Q8TDD1 881 aaKnown RBP27.38■■□□□ 1.97
COMMD5-207ENST00000543949 KDM3BQ7LBC6 1761 aa27.38■■□□□ 1.97
COMMD5-207ENST00000543949 RNF123Q5XPI4 1314 aa27.37■■□□□ 1.97
COMMD5-207ENST00000543949 MRC1P22897 1456 aa27.36■■□□□ 1.97
COMMD5-207ENST00000543949 NKX1-1Q15270 411 aaPredicted RBP27.35■■□□□ 1.97
COMMD5-207ENST00000543949 MIS18AQ9NYP9 233 aa27.35■■□□□ 1.97
COMMD5-207ENST00000543949 DDB1Q16531 1140 aa27.34■■□□□ 1.97
COMMD5-207ENST00000543949 ZNF428Q96B54 188 aa27.34■■□□□ 1.97
COMMD5-207ENST00000543949 BTBD11A6QL63 1104 aa27.33■■□□□ 1.97
COMMD5-207ENST00000543949 SLC52A2Q9HAB3 445 aa27.33■■□□□ 1.97
COMMD5-207ENST00000543949 RRP1P56182 461 aaKnown RBP27.32■■□□□ 1.96
COMMD5-207ENST00000543949 TWISTNBQ3B726 338 aaPredicted RBP27.32■■□□□ 1.96
COMMD5-207ENST00000543949 ATRNO75882 1429 aa27.31■■□□□ 1.96
COMMD5-207ENST00000543949 RARSP54136 660 aaKnown RBP27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms