RNA–Protein interactions for RNA: ENST00000543941.1

C1RL-209, Transcript of complement C1r subcomponent like, humanhuman

TSL 3

Gene C1RL, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-209ENST00000543941 CCER1Q8TC90 406 aaPredicted RBP15.9■□□□□ 0.14
C1RL-209ENST00000543941 EMILIN1Q9Y6C2 1016 aa15.9■□□□□ 0.14
C1RL-209ENST00000543941 RTL1A6NKG5 1358 aa15.89■□□□□ 0.13
C1RL-209ENST00000543941 MAP2P11137 1827 aaKnown RBP15.89■□□□□ 0.13
C1RL-209ENST00000543941 SGIP1Q9BQI5 828 aa15.88■□□□□ 0.13
C1RL-209ENST00000543941 ATF5Q9Y2D1 282 aaPredicted RBP15.88■□□□□ 0.13
C1RL-209ENST00000543941 TUBGCP6Q96RT7 1819 aa15.88■□□□□ 0.13
C1RL-209ENST00000543941 INSRP06213 1382 aa15.87■□□□□ 0.13
C1RL-209ENST00000543941 PRIM1P49642 420 aaKnown RBP15.87■□□□□ 0.13
C1RL-209ENST00000543941 ZCRB1Q8TBF4 217 aaKnown RBP15.87■□□□□ 0.13
C1RL-209ENST00000543941 LY75O60449 1722 aa15.87■□□□□ 0.13
C1RL-209ENST00000543941 ANKRD26Q9UPS8 1709 aa15.87■□□□□ 0.13
C1RL-209ENST00000543941 HSPA5P11021 654 aaKnown RBP15.86■□□□□ 0.13
C1RL-209ENST00000543941 STK32BQ9NY57 414 aa15.86■□□□□ 0.13
C1RL-209ENST00000543941 CDCA8Q53HL2 280 aa15.85■□□□□ 0.13
C1RL-209ENST00000543941 AKT1S1Q96B36 256 aa15.85■□□□□ 0.13
C1RL-209ENST00000543941 TOGARAM1Q9Y4F4 1720 aa15.85■□□□□ 0.13
C1RL-209ENST00000543941 FLT4P35916 1363 aa15.84■□□□□ 0.13
C1RL-209ENST00000543941 NCAPD2Q15021 1401 aa15.84■□□□□ 0.13
C1RL-209ENST00000543941 CYP27B1O15528 508 aa15.82■□□□□ 0.12
C1RL-209ENST00000543941 SYTL4Q96C24 671 aaPredicted RBP15.82■□□□□ 0.12
C1RL-209ENST00000543941 POLKQ9UBT6 870 aa15.82■□□□□ 0.12
C1RL-209ENST00000543941 COL24A1Q17RW2 1714 aa15.82■□□□□ 0.12
C1RL-209ENST00000543941 QSER1Q2KHR3 1735 aa15.82■□□□□ 0.12
C1RL-209ENST00000543941 ITGB4P16144 1822 aa15.82■□□□□ 0.12
C1RL-209ENST00000543941 PKD1L3Q7Z443 1732 aa15.81■□□□□ 0.12
C1RL-209ENST00000543941 POLR3GLQ9BT43 218 aa15.81■□□□□ 0.12
C1RL-209ENST00000543941 PPP1R1BQ9UD71 204 aaPredicted RBP15.81■□□□□ 0.12
C1RL-209ENST00000543941 KIF24Q5T7B8 1368 aa15.8■□□□□ 0.12
C1RL-209ENST00000543941 WASHC2AQ641Q2 1341 aa15.8■□□□□ 0.12
C1RL-209ENST00000543941 PNPLA7Q6ZV29 1317 aa15.8■□□□□ 0.12
C1RL-209ENST00000543941 EYA1Q99502 592 aa15.8■□□□□ 0.12
C1RL-209ENST00000543941 TATP17735 454 aaPredicted RBP15.79■□□□□ 0.12
C1RL-209ENST00000543941 MTFR1LQ9H019 292 aa15.79■□□□□ 0.12
C1RL-209ENST00000543941 PPM1GO15355 546 aaPredicted RBP15.78■□□□□ 0.12
C1RL-209ENST00000543941 EIF4G2P78344 907 aaKnown RBP eCLIP15.78■□□□□ 0.12
C1RL-209ENST00000543941 RAPGEF4Q8WZA2 1011 aa15.78■□□□□ 0.12
C1RL-209ENST00000543941 FHDC1Q9C0D6 1143 aaPredicted RBP15.78■□□□□ 0.12
C1RL-209ENST00000543941 PANK3Q9H999 370 aa15.78■□□□□ 0.12
C1RL-209ENST00000543941 TAF1LQ8IZX4 1826 aa15.78■□□□□ 0.12
C1RL-209ENST00000543941 CGNL1Q0VF96 1302 aa15.77■□□□□ 0.12
C1RL-209ENST00000543941 TNNT2P45379 298 aaPredicted RBP15.77■□□□□ 0.12
C1RL-209ENST00000543941 SLC27A3Q5K4L6 730 aa15.77■□□□□ 0.12
C1RL-209ENST00000543941 SYT17Q9BSW7 474 aa15.77■□□□□ 0.12
C1RL-209ENST00000543941 SMG6Q86US8 1419 aaKnown RBP15.77■□□□□ 0.11
C1RL-209ENST00000543941 EIF4A2Q14240 407 aaKnown RBP15.75■□□□□ 0.11
C1RL-209ENST00000543941 AMIGO3Q86WK7 504 aa15.75■□□□□ 0.11
C1RL-209ENST00000543941 SMIM5Q71RC9 77 aa15.74■□□□□ 0.11
C1RL-209ENST00000543941 CCNL1Q9UK58 526 aaPredicted RBP15.74■□□□□ 0.11
C1RL-209ENST00000543941 C5P01031 1676 aa15.73■□□□□ 0.11
C1RL-209ENST00000543941 PCDH11XQ9BZA7 1347 aa15.73■□□□□ 0.11
C1RL-209ENST00000543941 PCDH11YQ9BZA8 1340 aa15.73■□□□□ 0.11
C1RL-209ENST00000543941 NKX1-1Q15270 411 aaPredicted RBP15.73■□□□□ 0.11
C1RL-209ENST00000543941 MPRIPQ6WCQ1 1025 aa15.73■□□□□ 0.11
C1RL-209ENST00000543941 COL23A1Q86Y22 540 aaPredicted RBP15.73■□□□□ 0.11
C1RL-209ENST00000543941 PIGBQ92521 554 aa15.72■□□□□ 0.11
C1RL-209ENST00000543941 ARXQ96QS3 562 aa15.72■□□□□ 0.11
C1RL-209ENST00000543941 TFCP2L1Q9NZI6 479 aa15.71■□□□□ 0.11
C1RL-209ENST00000543941 YY1P25490 414 aa15.7■□□□□ 0.1
C1RL-209ENST00000543941 PALLDQ8WX93 1383 aa15.7■□□□□ 0.1
C1RL-209ENST00000543941 PHKG2P15735 406 aa15.69■□□□□ 0.1
C1RL-209ENST00000543941 IGSF1Q8N6C5 1336 aa15.68■□□□□ 0.1
C1RL-209ENST00000543941 UBR3Q6ZT12 1888 aa15.68■□□□□ 0.1
C1RL-209ENST00000543941 SLC16A10Q8TF71 515 aa15.68■□□□□ 0.1
C1RL-209ENST00000543941 C4BP0C0L5 1744 aa15.68■□□□□ 0.1
C1RL-209ENST00000543941 KIF7Q2M1P5 1343 aa15.68■□□□□ 0.1
C1RL-209ENST00000543941 MAP3K5Q99683 1374 aa15.67■□□□□ 0.1
C1RL-209ENST00000543941 AMER1Q5JTC6 1135 aaPredicted RBP15.67■□□□□ 0.1
C1RL-209ENST00000543941 AEBP1Q8IUX7 1158 aa15.67■□□□□ 0.1
C1RL-209ENST00000543941 NLGN2Q8NFZ4 835 aa15.67■□□□□ 0.1
C1RL-209ENST00000543941 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.67■□□□□ 0.1
C1RL-209ENST00000543941 ASAP1Q9ULH1 1129 aa15.67■□□□□ 0.1
C1RL-209ENST00000543941 ITPK1Q13572 414 aa15.66■□□□□ 0.1
C1RL-209ENST00000543941 MSL1Q68DK7 614 aa15.66■□□□□ 0.1
C1RL-209ENST00000543941 SLC4A9Q96Q91 983 aa15.66■□□□□ 0.1
C1RL-209ENST00000543941 SPG7Q9UQ90 795 aa15.66■□□□□ 0.1
C1RL-209ENST00000543941 PER1O15534 1290 aaPredicted RBP15.65■□□□□ 0.1
C1RL-209ENST00000543941 LINC00116Q8NCU8 138 aa15.65■□□□□ 0.1
C1RL-209ENST00000543941 KDM6AO15550 1401 aaPredicted RBP15.64■□□□□ 0.09
C1RL-209ENST00000543941 IFNL2Q8IZJ0 200 aa15.64■□□□□ 0.09
C1RL-209ENST00000543941 ATG3Q9NT62 314 aa15.64■□□□□ 0.09
C1RL-209ENST00000543941 CHD4Q14839 1912 aa15.63■□□□□ 0.09
C1RL-209ENST00000543941 MORC1Q86VD1 984 aa15.63■□□□□ 0.09
C1RL-209ENST00000543941 LOC102724428A0A0B4J2F2 783 aa15.62■□□□□ 0.09
C1RL-209ENST00000543941 IL13P35225 146 aa15.62■□□□□ 0.09
C1RL-209ENST00000543941 SIK1P57059 783 aa15.62■□□□□ 0.09
C1RL-209ENST00000543941 KLHL34Q8N239 644 aa15.61■□□□□ 0.09
C1RL-209ENST00000543941 SMARCC1Q92922 1105 aaPredicted RBP15.61■□□□□ 0.09
C1RL-209ENST00000543941 MSH5O43196 834 aa15.6■□□□□ 0.09
C1RL-209ENST00000543941 TMOD3Q9NYL9 352 aa15.6■□□□□ 0.09
C1RL-209ENST00000543941 MYH14Q7Z406 1995 aaKnown RBP15.6■□□□□ 0.09
C1RL-209ENST00000543941 KDRP35968 1356 aa15.6■□□□□ 0.09
C1RL-209ENST00000543941 YBX3P16989 372 aaKnown RBP eCLIP15.59■□□□□ 0.09
C1RL-209ENST00000543941 POLD1P28340 1107 aa15.59■□□□□ 0.09
C1RL-209ENST00000543941 KNSTRNQ9Y448 316 aa15.59■□□□□ 0.09
C1RL-209ENST00000543941 PHF14O94880 888 aa15.58■□□□□ 0.08
C1RL-209ENST00000543941 SULT6B1Q6IMI4 303 aa15.58■□□□□ 0.08
C1RL-209ENST00000543941 UTRNP46939 3433 aa15.58■□□□□ 0.08
C1RL-209ENST00000543941 COL5A3P25940 1745 aaPredicted RBP15.57■□□□□ 0.08
C1RL-209ENST00000543941 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms