RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 FBXW7Q969H0 707 aa10.31□□□□□ -0.76
ABCB1-210ENST00000543898 MEIS3Q99687 375 aa10.31□□□□□ -0.76
ABCB1-210ENST00000543898 HSP90B1P14625 803 aaKnown RBP10.31□□□□□ -0.76
ABCB1-210ENST00000543898 USP48Q86UV5 1035 aa10.31□□□□□ -0.76
ABCB1-210ENST00000543898 FAM184AQ8NB25 1140 aa10.31□□□□□ -0.76
ABCB1-210ENST00000543898 DDX54Q8TDD1 881 aaKnown RBP10.31□□□□□ -0.76
ABCB1-210ENST00000543898 ZNF500O60304 480 aaPredicted RBP10.3□□□□□ -0.76
ABCB1-210ENST00000543898 IPO4Q8TEX9 1081 aaKnown RBP10.3□□□□□ -0.76
ABCB1-210ENST00000543898 LRRCC1Q9C099 1032 aa10.3□□□□□ -0.76
ABCB1-210ENST00000543898 DCTPP1Q9H773 170 aa10.3□□□□□ -0.76
ABCB1-210ENST00000543898 TARBP1Q13395 1621 aaKnown RBP10.3□□□□□ -0.76
ABCB1-210ENST00000543898 DUOX2Q9NRD8 1548 aa10.3□□□□□ -0.76
ABCB1-210ENST00000543898 GIMAP6Q6P9H5 292 aa10.3□□□□□ -0.76
ABCB1-210ENST00000543898 KIF2CQ99661 725 aa10.3□□□□□ -0.76
ABCB1-210ENST00000543898 PTPRTO14522 1441 aa10.3□□□□□ -0.76
ABCB1-210ENST00000543898 SURF6O75683 361 aaKnown RBP10.3□□□□□ -0.76
ABCB1-210ENST00000543898 GNAI2P04899 355 aa10.3□□□□□ -0.76
ABCB1-210ENST00000543898 CAMK4Q16566 473 aa10.3□□□□□ -0.76
ABCB1-210ENST00000543898 ARHGAP45Q92619 1136 aa10.3□□□□□ -0.76
ABCB1-210ENST00000543898 NSFL1CQ9UNZ2 370 aaKnown RBP10.3□□□□□ -0.76
ABCB1-210ENST00000543898 TNNT3P45378 269 aaPredicted RBP10.3□□□□□ -0.76
ABCB1-210ENST00000543898 CCDC94Q9BW85 323 aaPredicted RBP10.3□□□□□ -0.76
ABCB1-210ENST00000543898 TERF1P54274 439 aa10.29□□□□□ -0.76
ABCB1-210ENST00000543898 TPD52L1Q16890 204 aaPredicted RBP10.29□□□□□ -0.76
ABCB1-210ENST00000543898 BICD2Q8TD16 824 aa10.29□□□□□ -0.76
ABCB1-210ENST00000543898 LTV1Q96GA3 475 aaPredicted RBP10.29□□□□□ -0.76
ABCB1-210ENST00000543898 GOLGA6L19H0YKK7 550 aa10.29□□□□□ -0.76
ABCB1-210ENST00000543898 LETM1O95202 739 aaPredicted RBP10.29□□□□□ -0.76
ABCB1-210ENST00000543898 EIF2S2P20042 333 aaKnown RBP10.29□□□□□ -0.76
ABCB1-210ENST00000543898 CCDC183Q5T5S1 534 aa10.29□□□□□ -0.76
ABCB1-210ENST00000543898 FERMT3Q86UX7 667 aa10.29□□□□□ -0.76
ABCB1-210ENST00000543898 NUTM1Q86Y26 1132 aa10.29□□□□□ -0.76
ABCB1-210ENST00000543898 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.29□□□□□ -0.76
ABCB1-210ENST00000543898 ERVK-7P63135 1459 aa10.29□□□□□ -0.76
ABCB1-210ENST00000543898 JARID2Q92833 1246 aaPredicted RBP10.29□□□□□ -0.76
ABCB1-210ENST00000543898 CNPY2Q9Y2B0 182 aa10.29□□□□□ -0.76
ABCB1-210ENST00000543898 NLRP1Q9C000 1473 aa10.29□□□□□ -0.76
ABCB1-210ENST00000543898 GADD45BO75293 160 aaPredicted RBP10.28□□□□□ -0.76
ABCB1-210ENST00000543898 ANKRD44Q8N8A2 993 aa10.28□□□□□ -0.76
ABCB1-210ENST00000543898 ANKRD36BQ8N2N9 1353 aa10.28□□□□□ -0.76
ABCB1-210ENST00000543898 BECN2A8MW95 431 aa10.28□□□□□ -0.76
ABCB1-210ENST00000543898 MX1P20591 662 aa10.28□□□□□ -0.76
ABCB1-210ENST00000543898 SIRT2Q8IXJ6 389 aa10.28□□□□□ -0.76
ABCB1-210ENST00000543898 CCDC192P0DO97 292 aa10.28□□□□□ -0.76
ABCB1-210ENST00000543898 SMAP1Q8IYB5 467 aaPredicted RBP10.28□□□□□ -0.76
ABCB1-210ENST00000543898 PRIMPOLQ96LW4 560 aa10.28□□□□□ -0.76
ABCB1-210ENST00000543898 PPIP5K1Q6PFW1 1433 aa10.28□□□□□ -0.76
ABCB1-210ENST00000543898 SYNMO15061 1565 aa10.28□□□□□ -0.76
ABCB1-210ENST00000543898 FOSBP53539 338 aa10.27□□□□□ -0.76
ABCB1-210ENST00000543898 PDE1AP54750 535 aa10.27□□□□□ -0.76
ABCB1-210ENST00000543898 NME9Q86XW9 330 aa10.27□□□□□ -0.76
ABCB1-210ENST00000543898 C16orf45Q96MC5 204 aaPredicted RBP10.27□□□□□ -0.76
ABCB1-210ENST00000543898 PHF23Q9BUL5 403 aaPredicted RBP10.27□□□□□ -0.76
ABCB1-210ENST00000543898 CWC27Q6UX04 472 aaKnown RBP10.27□□□□□ -0.77
ABCB1-210ENST00000543898 WAPLQ7Z5K2 1190 aa10.27□□□□□ -0.77
ABCB1-210ENST00000543898 CCDC83Q8IWF9 413 aa10.27□□□□□ -0.77
ABCB1-210ENST00000543898 PLEKHF1Q96S99 279 aa10.27□□□□□ -0.77
ABCB1-210ENST00000543898 UBTFL1P0CB47 393 aaPredicted RBP10.26□□□□□ -0.77
ABCB1-210ENST00000543898 ZKSCAN1P17029 563 aaPredicted RBP10.26□□□□□ -0.77
ABCB1-210ENST00000543898 SAMD1Q6SPF0 538 aaPredicted RBP10.26□□□□□ -0.77
ABCB1-210ENST00000543898 E9PCH4 1651 aa10.26□□□□□ -0.77
ABCB1-210ENST00000543898 CEP85Q6P2H3 762 aa10.26□□□□□ -0.77
ABCB1-210ENST00000543898 NSD2O96028 1365 aa10.26□□□□□ -0.77
ABCB1-210ENST00000543898 NRDCO43847 1150 aa10.26□□□□□ -0.77
ABCB1-210ENST00000543898 H3BQV1 296 aa10.26□□□□□ -0.77
ABCB1-210ENST00000543898 GNAI3P08754 354 aa10.26□□□□□ -0.77
ABCB1-210ENST00000543898 AMPHP49418 695 aa10.26□□□□□ -0.77
ABCB1-210ENST00000543898 IFFO2Q5TF58 517 aa10.26□□□□□ -0.77
ABCB1-210ENST00000543898 CKAP2LQ8IYA6 745 aa10.26□□□□□ -0.77
ABCB1-210ENST00000543898 TPM3P06753 285 aa10.25□□□□□ -0.77
ABCB1-210ENST00000543898 IRX3P78415 501 aaPredicted RBP10.25□□□□□ -0.77
ABCB1-210ENST00000543898 CEBPZQ03701 1054 aaKnown RBP10.25□□□□□ -0.77
ABCB1-210ENST00000543898 CCDC112Q8NEF3 446 aa10.25□□□□□ -0.77
ABCB1-210ENST00000543898 MYRIPQ8NFW9 859 aa10.25□□□□□ -0.77
ABCB1-210ENST00000543898 POLKQ9UBT6 870 aa10.25□□□□□ -0.77
ABCB1-210ENST00000543898 A0A1W2PP64 1363 aa10.25□□□□□ -0.77
ABCB1-210ENST00000543898 DDIT3P35638 169 aa10.25□□□□□ -0.77
ABCB1-210ENST00000543898 ESYT1Q9BSJ8 1104 aa10.25□□□□□ -0.77
ABCB1-210ENST00000543898 CGNQ9P2M7 1197 aaKnown RBP10.25□□□□□ -0.77
ABCB1-210ENST00000543898 ZRANB1Q9UGI0 708 aa10.25□□□□□ -0.77
ABCB1-210ENST00000543898 KDM5AP29375 1690 aaKnown RBP10.25□□□□□ -0.77
ABCB1-210ENST00000543898 CASTP20810 708 aaKnown RBP10.25□□□□□ -0.77
ABCB1-210ENST00000543898 CCT4P50991 539 aaKnown RBP10.25□□□□□ -0.77
ABCB1-210ENST00000543898 LARP1BQ659C4 914 aaKnown RBP10.25□□□□□ -0.77
ABCB1-210ENST00000543898 TNMDQ9H2S6 317 aa10.25□□□□□ -0.77
ABCB1-210ENST00000543898 ADCY10Q96PN6 1610 aa10.24□□□□□ -0.77
ABCB1-210ENST00000543898 STK3Q13188 491 aa10.24□□□□□ -0.77
ABCB1-210ENST00000543898 RUFY2Q8WXA3 655 aa10.24□□□□□ -0.77
ABCB1-210ENST00000543898 STX6O43752 255 aa10.24□□□□□ -0.77
ABCB1-210ENST00000543898 JAKMIP1Q96N16 626 aaKnown RBP10.24□□□□□ -0.77
ABCB1-210ENST00000543898 SPG7Q9UQ90 795 aa10.24□□□□□ -0.77
ABCB1-210ENST00000543898 MAST1Q9Y2H9 1570 aa10.24□□□□□ -0.77
ABCB1-210ENST00000543898 RPGRIP1LQ68CZ1 1315 aa10.24□□□□□ -0.77
ABCB1-210ENST00000543898 SAMD9LQ8IVG5 1584 aa10.24□□□□□ -0.77
ABCB1-210ENST00000543898 UVSSAQ2YD98 709 aa10.24□□□□□ -0.77
ABCB1-210ENST00000543898 CLASP1Q7Z460 1538 aa10.24□□□□□ -0.77
ABCB1-210ENST00000543898 CDC42BPAQ5VT25 1732 aa10.23□□□□□ -0.77
ABCB1-210ENST00000543898 ERICH4A6NGS2 130 aa10.23□□□□□ -0.77
ABCB1-210ENST00000543898 HTATSF1O43719 755 aaKnown RBP10.23□□□□□ -0.77
ABCB1-210ENST00000543898 IDI1Q13907 227 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms