RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 OVOS2A0A0G2JMS6 1433 aa13.39□□□□□ -0.27
TNFRSF1A-214ENST00000543048 EZH2Q15910 746 aaKnown RBP13.39□□□□□ -0.27
TNFRSF1A-214ENST00000543048 CAMKK2Q96RR4 588 aa13.39□□□□□ -0.27
TNFRSF1A-214ENST00000543048 RTL1A6NKG5 1358 aa13.38□□□□□ -0.27
TNFRSF1A-214ENST00000543048 HSP90AB2PQ58FF8 381 aa13.38□□□□□ -0.27
TNFRSF1A-214ENST00000543048 AKT1S1Q96B36 256 aa13.38□□□□□ -0.27
TNFRSF1A-214ENST00000543048 KIF24Q5T7B8 1368 aa13.37□□□□□ -0.27
TNFRSF1A-214ENST00000543048 ANKRD26Q9UPS8 1709 aa13.37□□□□□ -0.27
TNFRSF1A-214ENST00000543048 BCL11BQ9C0K0 894 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF1A-214ENST00000543048 INSRP06213 1382 aa13.36□□□□□ -0.27
TNFRSF1A-214ENST00000543048 NBPF6Q5VWK0 638 aa13.36□□□□□ -0.27
TNFRSF1A-214ENST00000543048 NBPF4Q96M43 638 aa13.36□□□□□ -0.27
TNFRSF1A-214ENST00000543048 BCL9O00512 1426 aa13.36□□□□□ -0.27
TNFRSF1A-214ENST00000543048 FLT4P35916 1363 aa13.35□□□□□ -0.27
TNFRSF1A-214ENST00000543048 PARD3Q8TEW0 1356 aa13.35□□□□□ -0.27
TNFRSF1A-214ENST00000543048 PLSCR1O15162 318 aa13.35□□□□□ -0.27
TNFRSF1A-214ENST00000543048 PPM1GO15355 546 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF1A-214ENST00000543048 KNSTRNQ9Y448 316 aa13.35□□□□□ -0.27
TNFRSF1A-214ENST00000543048 EMILIN1Q9Y6C2 1016 aa13.35□□□□□ -0.27
TNFRSF1A-214ENST00000543048 KIF7Q2M1P5 1343 aa13.35□□□□□ -0.27
TNFRSF1A-214ENST00000543048 TNS2Q63HR2 1409 aa13.34□□□□□ -0.27
TNFRSF1A-214ENST00000543048 SMG6Q86US8 1419 aaKnown RBP13.34□□□□□ -0.27
TNFRSF1A-214ENST00000543048 POLKQ9UBT6 870 aa13.34□□□□□ -0.27
TNFRSF1A-214ENST00000543048 WASHC2AQ641Q2 1341 aa13.34□□□□□ -0.27
TNFRSF1A-214ENST00000543048 TNNT2P45379 298 aaPredicted RBP13.33□□□□□ -0.28
TNFRSF1A-214ENST00000543048 PTF1AQ7RTS3 328 aa13.33□□□□□ -0.28
TNFRSF1A-214ENST00000543048 ZCRB1Q8TBF4 217 aaKnown RBP13.33□□□□□ -0.28
TNFRSF1A-214ENST00000543048 DDX54Q8TDD1 881 aaKnown RBP13.33□□□□□ -0.28
TNFRSF1A-214ENST00000543048 NBPF14Q5TI25 921 aa13.32□□□□□ -0.28
TNFRSF1A-214ENST00000543048 MORC1Q86VD1 984 aa13.32□□□□□ -0.28
TNFRSF1A-214ENST00000543048 NSD2O96028 1365 aa13.32□□□□□ -0.28
TNFRSF1A-214ENST00000543048 RREB1Q92766 1687 aa13.31□□□□□ -0.28
TNFRSF1A-214ENST00000543048 PSDA5PKW4 1024 aaPredicted RBP13.31□□□□□ -0.28
TNFRSF1A-214ENST00000543048 KCNQ2O43526 872 aa13.31□□□□□ -0.28
TNFRSF1A-214ENST00000543048 TATP17735 454 aaPredicted RBP13.31□□□□□ -0.28
TNFRSF1A-214ENST00000543048 USHBP1Q8N6Y0 703 aa13.31□□□□□ -0.28
TNFRSF1A-214ENST00000543048 RAPGEF4Q8WZA2 1011 aa13.31□□□□□ -0.28
TNFRSF1A-214ENST00000543048 ACSBG1Q96GR2 724 aa13.31□□□□□ -0.28
TNFRSF1A-214ENST00000543048 RGPD3A6NKT7 1758 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF1A-214ENST00000543048 RGPD4Q7Z3J3 1758 aa13.3□□□□□ -0.28
TNFRSF1A-214ENST00000543048 R3HDM1Q15032 1099 aaKnown RBP13.29□□□□□ -0.28
TNFRSF1A-214ENST00000543048 SSUH2Q9Y2M2 353 aa13.29□□□□□ -0.28
TNFRSF1A-214ENST00000543048 NUP188Q5SRE5 1749 aa13.29□□□□□ -0.28
TNFRSF1A-214ENST00000543048 NHSQ6T4R5 1651 aa13.28□□□□□ -0.28
TNFRSF1A-214ENST00000543048 SHANK3Q9BYB0 1731 aa13.28□□□□□ -0.28
TNFRSF1A-214ENST00000543048 BTAF1O14981 1849 aa13.28□□□□□ -0.28
TNFRSF1A-214ENST00000543048 PER1O15534 1290 aaPredicted RBP13.28□□□□□ -0.28
TNFRSF1A-214ENST00000543048 AMER1Q5JTC6 1135 aaPredicted RBP13.28□□□□□ -0.28
TNFRSF1A-214ENST00000543048 PROM2Q8N271 834 aa13.28□□□□□ -0.28
TNFRSF1A-214ENST00000543048 EYA1Q99502 592 aa13.28□□□□□ -0.28
TNFRSF1A-214ENST00000543048 MEGF6O75095 1541 aa13.27□□□□□ -0.29
TNFRSF1A-214ENST00000543048 PRIM1P49642 420 aaKnown RBP13.26□□□□□ -0.29
TNFRSF1A-214ENST00000543048 EIF4A2Q14240 407 aaKnown RBP13.26□□□□□ -0.29
TNFRSF1A-214ENST00000543048 TXNRD1Q16881 649 aa13.26□□□□□ -0.29
TNFRSF1A-214ENST00000543048 REM2Q8IYK8 340 aaPredicted RBP13.26□□□□□ -0.29
TNFRSF1A-214ENST00000543048 SPDYE4A6NLX3 237 aa13.25□□□□□ -0.29
TNFRSF1A-214ENST00000543048 SRCAPQ6ZRS2 3230 aa13.24□□□□□ -0.29
TNFRSF1A-214ENST00000543048 SPG7Q9UQ90 795 aa13.24□□□□□ -0.29
TNFRSF1A-214ENST00000543048 NCAPD2Q15021 1401 aa13.23□□□□□ -0.29
TNFRSF1A-214ENST00000543048 PCDH11XQ9BZA7 1347 aa13.23□□□□□ -0.29
TNFRSF1A-214ENST00000543048 PCDH11YQ9BZA8 1340 aa13.23□□□□□ -0.29
TNFRSF1A-214ENST00000543048 SYTL4Q96C24 671 aaPredicted RBP13.23□□□□□ -0.29
TNFRSF1A-214ENST00000543048 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.23□□□□□ -0.29
TNFRSF1A-214ENST00000543048 ITGB4P16144 1822 aa13.23□□□□□ -0.29
TNFRSF1A-214ENST00000543048 DOT1LQ8TEK3 1739 aa13.22□□□□□ -0.29
TNFRSF1A-214ENST00000543048 CC2D1BQ5T0F9 858 aaKnown RBP13.22□□□□□ -0.29
TNFRSF1A-214ENST00000543048 PKD1L3Q7Z443 1732 aa13.22□□□□□ -0.29
TNFRSF1A-214ENST00000543048 CYP27B1O15528 508 aa13.21□□□□□ -0.29
TNFRSF1A-214ENST00000543048 MTHFSP49914 203 aa13.21□□□□□ -0.29
TNFRSF1A-214ENST00000543048 STK32BQ9NY57 414 aa13.21□□□□□ -0.29
TNFRSF1A-214ENST00000543048 NKX1-1Q15270 411 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF1A-214ENST00000543048 NPC1L1Q9UHC9 1359 aa13.2□□□□□ -0.3
TNFRSF1A-214ENST00000543048 IGSF1Q8N6C5 1336 aa13.19□□□□□ -0.3
TNFRSF1A-214ENST00000543048 IL13P35225 146 aa13.19□□□□□ -0.3
TNFRSF1A-214ENST00000543048 SLC15A2Q16348 729 aa13.19□□□□□ -0.3
TNFRSF1A-214ENST00000543048 SLC27A3Q5K4L6 730 aa13.19□□□□□ -0.3
TNFRSF1A-214ENST00000543048 IFNL2Q8IZJ0 200 aa13.19□□□□□ -0.3
TNFRSF1A-214ENST00000543048 ANO8Q9HCE9 1232 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF1A-214ENST00000543048 LRP5O75197 1615 aa13.19□□□□□ -0.3
TNFRSF1A-214ENST00000543048 LY75O60449 1722 aa13.19□□□□□ -0.3
TNFRSF1A-214ENST00000543048 CNGB1Q14028 1251 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF1A-214ENST00000543048 PLEKHO1Q53GL0 409 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF1A-214ENST00000543048 MPRIPQ6WCQ1 1025 aa13.18□□□□□ -0.3
TNFRSF1A-214ENST00000543048 LRRC4BQ9NT99 713 aa13.18□□□□□ -0.3
TNFRSF1A-214ENST00000543048 PLEKHG2Q9H7P9 1386 aa13.17□□□□□ -0.3
TNFRSF1A-214ENST00000543048 PHKG2P15735 406 aa13.16□□□□□ -0.3
TNFRSF1A-214ENST00000543048 AMOTQ4VCS5 1084 aa13.16□□□□□ -0.3
TNFRSF1A-214ENST00000543048 SULT6B1Q6IMI4 303 aa13.16□□□□□ -0.3
TNFRSF1A-214ENST00000543048 SPON1Q9HCB6 807 aa13.16□□□□□ -0.3
TNFRSF1A-214ENST00000543048 HMGB2P26583 209 aaKnown RBP13.15□□□□□ -0.3
TNFRSF1A-214ENST00000543048 ZEB1P37275 1124 aaPredicted RBP13.15□□□□□ -0.3
TNFRSF1A-214ENST00000543048 TOGARAM1Q9Y4F4 1720 aa13.14□□□□□ -0.31
TNFRSF1A-214ENST00000543048 DIAPH1O60610 1272 aaKnown RBP13.14□□□□□ -0.31
TNFRSF1A-214ENST00000543048 HSP90AB1P08238 724 aaKnown RBP13.14□□□□□ -0.31
TNFRSF1A-214ENST00000543048 AEBP1Q8IUX7 1158 aa13.14□□□□□ -0.31
TNFRSF1A-214ENST00000543048 PIGBQ92521 554 aa13.14□□□□□ -0.31
TNFRSF1A-214ENST00000543048 SMARCC1Q92922 1105 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF1A-214ENST00000543048 CCNL1Q9UK58 526 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF1A-214ENST00000543048 CASZ1Q86V15 1759 aa13.14□□□□□ -0.31
TNFRSF1A-214ENST00000543048 ERVV-2B6SEH9 535 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms