RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 RAPGEF4Q8WZA2 1011 aa7.8□□□□□ -1.16
ABCF1-207ENST00000542772 GLI3P10071 1580 aa7.8□□□□□ -1.16
ABCF1-207ENST00000542772 RXRBP28702 533 aa7.79□□□□□ -1.16
ABCF1-207ENST00000542772 NKX1-1Q15270 411 aaPredicted RBP7.79□□□□□ -1.16
ABCF1-207ENST00000542772 MTHFSDQ2M296 383 aaKnown RBP7.79□□□□□ -1.16
ABCF1-207ENST00000542772 PLEKHO1Q53GL0 409 aaPredicted RBP7.79□□□□□ -1.16
ABCF1-207ENST00000542772 ZCRB1Q8TBF4 217 aaKnown RBP7.79□□□□□ -1.16
ABCF1-207ENST00000542772 USP35Q9P2H5 1018 aa7.79□□□□□ -1.16
ABCF1-207ENST00000542772 HTATSF1O43719 755 aaKnown RBP7.78□□□□□ -1.16
ABCF1-207ENST00000542772 FAM98CQ17RN3 349 aaKnown RBP7.78□□□□□ -1.16
ABCF1-207ENST00000542772 NGEFQ8N5V2 710 aa7.78□□□□□ -1.16
ABCF1-207ENST00000542772 PHF23Q9BUL5 403 aaPredicted RBP7.78□□□□□ -1.16
ABCF1-207ENST00000542772 SPG7Q9UQ90 795 aa7.78□□□□□ -1.16
ABCF1-207ENST00000542772 CCDC9Q9Y3X0 531 aaKnown RBP7.78□□□□□ -1.16
ABCF1-207ENST00000542772 OVOS2A0A0G2JMS6 1433 aa7.78□□□□□ -1.16
ABCF1-207ENST00000542772 APAF1O14727 1248 aa7.77□□□□□ -1.17
ABCF1-207ENST00000542772 CYP27B1O15528 508 aa7.77□□□□□ -1.17
ABCF1-207ENST00000542772 TMPOP42166 694 aaKnown RBP7.77□□□□□ -1.17
ABCF1-207ENST00000542772 DDB1Q16531 1140 aa7.77□□□□□ -1.17
ABCF1-207ENST00000542772 CCDC27Q2M243 656 aa7.77□□□□□ -1.17
ABCF1-207ENST00000542772 AKAP4Q5JQC9 854 aa7.77□□□□□ -1.17
ABCF1-207ENST00000542772 SEPT12Q8IYM1 358 aa7.77□□□□□ -1.17
ABCF1-207ENST00000542772 IFNL2Q8IZJ0 200 aa7.77□□□□□ -1.17
ABCF1-207ENST00000542772 GAS2L2Q8NHY3 880 aa7.77□□□□□ -1.17
ABCF1-207ENST00000542772 PARP4Q9UKK3 1724 aaKnown RBP7.77□□□□□ -1.17
ABCF1-207ENST00000542772 MEGF6O75095 1541 aa7.77□□□□□ -1.17
ABCF1-207ENST00000542772 THSD7AQ9UPZ6 1657 aa7.76□□□□□ -1.17
ABCF1-207ENST00000542772 WNK3Q9BYP7 1800 aa7.76□□□□□ -1.17
ABCF1-207ENST00000542772 PKD1L3Q7Z443 1732 aa7.76□□□□□ -1.17
ABCF1-207ENST00000542772 NEFMP07197 916 aa7.76□□□□□ -1.17
ABCF1-207ENST00000542772 PHKG2P15735 406 aa7.76□□□□□ -1.17
ABCF1-207ENST00000542772 NFE2L2Q16236 605 aa7.76□□□□□ -1.17
ABCF1-207ENST00000542772 CCDC146Q8IYE0 955 aa7.76□□□□□ -1.17
ABCF1-207ENST00000542772 MARCH10Q8NA82 808 aaPredicted RBP7.76□□□□□ -1.17
ABCF1-207ENST00000542772 TRIM35Q9UPQ4 493 aa7.76□□□□□ -1.17
ABCF1-207ENST00000542772 GNAT3A8MTJ3 354 aa7.75□□□□□ -1.17
ABCF1-207ENST00000542772 RIPK4P57078 832 aa7.75□□□□□ -1.17
ABCF1-207ENST00000542772 IL17REQ8NFR9 667 aa7.75□□□□□ -1.17
ABCF1-207ENST00000542772 BCL9O00512 1426 aa7.75□□□□□ -1.17
ABCF1-207ENST00000542772 PCDH11XQ9BZA7 1347 aa7.75□□□□□ -1.17
ABCF1-207ENST00000542772 PCDH11YQ9BZA8 1340 aa7.75□□□□□ -1.17
ABCF1-207ENST00000542772 SHANK3Q9BYB0 1731 aa7.75□□□□□ -1.17
ABCF1-207ENST00000542772 HSP90AB1P08238 724 aaKnown RBP7.74□□□□□ -1.17
ABCF1-207ENST00000542772 PDE3BQ13370 1112 aa7.74□□□□□ -1.17
ABCF1-207ENST00000542772 DCAF5Q96JK2 942 aa7.74□□□□□ -1.17
ABCF1-207ENST00000542772 LGR6Q9HBX8 967 aa7.74□□□□□ -1.17
ABCF1-207ENST00000542772 ZNF521Q96K83 1311 aa7.74□□□□□ -1.17
ABCF1-207ENST00000542772 MAPK8IP3Q9UPT6 1336 aa7.74□□□□□ -1.17
ABCF1-207ENST00000542772 DLG5Q8TDM6 1919 aa7.74□□□□□ -1.17
ABCF1-207ENST00000542772 ADAMTS7Q9UKP4 1686 aa7.73□□□□□ -1.17
ABCF1-207ENST00000542772 TNS2Q63HR2 1409 aa7.73□□□□□ -1.17
ABCF1-207ENST00000542772 ERVV-2B6SEH9 535 aa7.73□□□□□ -1.17
ABCF1-207ENST00000542772 RNMTO43148 476 aaKnown RBP7.73□□□□□ -1.17
ABCF1-207ENST00000542772 C1orf141Q5JVX7 400 aa7.73□□□□□ -1.17
ABCF1-207ENST00000542772 ZNF530Q6P9A1 599 aaPredicted RBP7.73□□□□□ -1.17
ABCF1-207ENST00000542772 KRT27Q7Z3Y8 459 aa7.73□□□□□ -1.17
ABCF1-207ENST00000542772 WDR63Q8IWG1 891 aa7.73□□□□□ -1.17
ABCF1-207ENST00000542772 WWC1Q8IX03 1113 aa7.73□□□□□ -1.17
ABCF1-207ENST00000542772 DDX54Q8TDD1 881 aaKnown RBP7.73□□□□□ -1.17
ABCF1-207ENST00000542772 CEMIPQ8WUJ3 1361 aa7.72□□□□□ -1.17
ABCF1-207ENST00000542772 LRRC37A3O60309 1634 aa7.72□□□□□ -1.17
ABCF1-207ENST00000542772 ZNF853P0CG23 659 aa7.72□□□□□ -1.17
ABCF1-207ENST00000542772 LMOD3Q0VAK6 560 aa7.72□□□□□ -1.17
ABCF1-207ENST00000542772 MPRIPQ6WCQ1 1025 aa7.72□□□□□ -1.17
ABCF1-207ENST00000542772 BABAM1Q9NWV8 329 aa7.72□□□□□ -1.17
ABCF1-207ENST00000542772 BRWD3Q6RI45 1802 aa7.72□□□□□ -1.17
ABCF1-207ENST00000542772 MAP3K5Q99683 1374 aa7.71□□□□□ -1.17
ABCF1-207ENST00000542772 SCN11AQ9UI33 1791 aa7.71□□□□□ -1.17
ABCF1-207ENST00000542772 TAF7Q15545 349 aaPredicted RBP7.71□□□□□ -1.18
ABCF1-207ENST00000542772 NEUROD2Q15784 382 aa7.71□□□□□ -1.18
ABCF1-207ENST00000542772 FAM196AQ6ZSG2 479 aa7.71□□□□□ -1.18
ABCF1-207ENST00000542772 TRMT2AQ8IZ69 625 aaKnown RBP7.71□□□□□ -1.18
ABCF1-207ENST00000542772 RTF1Q92541 710 aaKnown RBP7.71□□□□□ -1.18
ABCF1-207ENST00000542772 RRP7AQ9Y3A4 280 aaKnown RBP7.71□□□□□ -1.18
ABCF1-207ENST00000542772 IL16Q14005 1332 aa7.71□□□□□ -1.18
ABCF1-207ENST00000542772 RGS12O14924 1447 aa7.7□□□□□ -1.18
ABCF1-207ENST00000542772 CHL1O00533 1208 aa7.7□□□□□ -1.18
ABCF1-207ENST00000542772 DCTN1Q14203 1278 aa7.7□□□□□ -1.18
ABCF1-207ENST00000542772 MCM10Q7L590 875 aa7.7□□□□□ -1.18
ABCF1-207ENST00000542772 NFATC2IPQ8NCF5 419 aa7.7□□□□□ -1.18
ABCF1-207ENST00000542772 CFAP44Q96MT7 982 aa7.7□□□□□ -1.18
ABCF1-207ENST00000542772 SLC52A2Q9HAB3 445 aa7.7□□□□□ -1.18
ABCF1-207ENST00000542772 VIRMAQ69YN4 1812 aaKnown RBP7.7□□□□□ -1.18
ABCF1-207ENST00000542772 KDM6AO15550 1401 aaPredicted RBP7.69□□□□□ -1.18
ABCF1-207ENST00000542772 SBF2Q86WG5 1849 aa7.69□□□□□ -1.18
ABCF1-207ENST00000542772 PRIM1P49642 420 aaKnown RBP7.69□□□□□ -1.18
ABCF1-207ENST00000542772 CABP4P57796 275 aa7.69□□□□□ -1.18
ABCF1-207ENST00000542772 HNRNPUQ00839 825 aaKnown RBP eCLIP7.69□□□□□ -1.18
ABCF1-207ENST00000542772 CALD1Q05682 793 aaKnown RBP7.69□□□□□ -1.18
ABCF1-207ENST00000542772 PIGBQ92521 554 aa7.69□□□□□ -1.18
ABCF1-207ENST00000542772 BCL11BQ9C0K0 894 aaPredicted RBP7.69□□□□□ -1.18
ABCF1-207ENST00000542772 ZBED9Q6R2W3 1325 aa7.69□□□□□ -1.18
ABCF1-207ENST00000542772 A0A0G2JS52 829 aa7.68□□□□□ -1.18
ABCF1-207ENST00000542772 KCNQ2O43526 872 aa7.68□□□□□ -1.18
ABCF1-207ENST00000542772 GNAI1P63096 354 aa7.68□□□□□ -1.18
ABCF1-207ENST00000542772 MYT1Q01538 1121 aa7.68□□□□□ -1.18
ABCF1-207ENST00000542772 GOLGA2Q08379 1002 aa7.68□□□□□ -1.18
ABCF1-207ENST00000542772 SLFN5Q08AF3 891 aa7.68□□□□□ -1.18
ABCF1-207ENST00000542772 TEFQ10587 303 aa7.68□□□□□ -1.18
ABCF1-207ENST00000542772 FAM182BQ5T319 152 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms