RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 PPP1R1BQ9UD71 204 aaPredicted RBP27.86■■■□□ 2.05
DDB1-220ENST00000542337 EMILIN1Q9Y6C2 1016 aa27.86■■■□□ 2.05
DDB1-220ENST00000542337 NHSQ6T4R5 1651 aa27.85■■■□□ 2.05
DDB1-220ENST00000542337 SLC15A2Q16348 729 aa27.84■■■□□ 2.05
DDB1-220ENST00000542337 PANK3Q9H999 370 aa27.84■■■□□ 2.05
DDB1-220ENST00000542337 PRIM1P49642 420 aaKnown RBP27.82■■■□□ 2.04
DDB1-220ENST00000542337 MEGF6O75095 1541 aa27.82■■■□□ 2.04
DDB1-220ENST00000542337 WASHC2AQ641Q2 1341 aa27.8■■■□□ 2.04
DDB1-220ENST00000542337 SLC27A3Q5K4L6 730 aa27.79■■■□□ 2.04
DDB1-220ENST00000542337 KAT6BQ8WYB5 2073 aa27.79■■■□□ 2.04
DDB1-220ENST00000542337 TNNT2P45379 298 aaPredicted RBP27.78■■■□□ 2.04
DDB1-220ENST00000542337 POLKQ9UBT6 870 aa27.78■■■□□ 2.04
DDB1-220ENST00000542337 PCDH11XQ9BZA7 1347 aa27.77■■■□□ 2.04
DDB1-220ENST00000542337 PCDH11YQ9BZA8 1340 aa27.77■■■□□ 2.04
DDB1-220ENST00000542337 RGPD2P0DJD1 1756 aa27.76■■■□□ 2.03
DDB1-220ENST00000542337 ZBTB7AO95365 584 aa27.75■■■□□ 2.03
DDB1-220ENST00000542337 BTAF1O14981 1849 aa27.74■■■□□ 2.03
DDB1-220ENST00000542337 PDGFDQ9GZP0 370 aaPredicted RBP27.73■■■□□ 2.03
DDB1-220ENST00000542337 KNSTRNQ9Y448 316 aa27.73■■■□□ 2.03
DDB1-220ENST00000542337 NSD2O96028 1365 aa27.73■■■□□ 2.03
DDB1-220ENST00000542337 LRRC4BQ9NT99 713 aa27.72■■■□□ 2.03
DDB1-220ENST00000542337 SPG7Q9UQ90 795 aa27.72■■■□□ 2.03
DDB1-220ENST00000542337 EYA1Q99502 592 aa27.71■■■□□ 2.03
DDB1-220ENST00000542337 ATF5Q9Y2D1 282 aaPredicted RBP27.71■■■□□ 2.03
DDB1-220ENST00000542337 DCAF8L1A6NGE4 600 aa27.7■■■□□ 2.02
DDB1-220ENST00000542337 MORC1Q86VD1 984 aa27.7■■■□□ 2.02
DDB1-220ENST00000542337 MTFR1LQ9H019 292 aa27.7■■■□□ 2.02
DDB1-220ENST00000542337 HMGB2P26583 209 aaKnown RBP27.69■■■□□ 2.02
DDB1-220ENST00000542337 CYP27B1O15528 508 aa27.66■■■□□ 2.02
DDB1-220ENST00000542337 EIF4A2Q14240 407 aaKnown RBP27.66■■■□□ 2.02
DDB1-220ENST00000542337 ZNF827Q17R98 1081 aa27.66■■■□□ 2.02
DDB1-220ENST00000542337 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.66■■■□□ 2.02
DDB1-220ENST00000542337 CCNL1Q9UK58 526 aaPredicted RBP27.66■■■□□ 2.02
DDB1-220ENST00000542337 MPRIPQ6WCQ1 1025 aa27.65■■■□□ 2.02
DDB1-220ENST00000542337 TFCP2L1Q9NZI6 479 aa27.65■■■□□ 2.02
DDB1-220ENST00000542337 CASZ1Q86V15 1759 aa27.65■■■□□ 2.02
DDB1-220ENST00000542337 MAP2P11137 1827 aaKnown RBP27.64■■■□□ 2.02
DDB1-220ENST00000542337 AKT1S1Q96B36 256 aa27.64■■■□□ 2.02
DDB1-220ENST00000542337 DOT1LQ8TEK3 1739 aa27.64■■■□□ 2.01
DDB1-220ENST00000542337 KCNQ4P56696 695 aa27.63■■■□□ 2.01
DDB1-220ENST00000542337 NCAPD2Q15021 1401 aa27.63■■■□□ 2.01
DDB1-220ENST00000542337 SHANK3Q9BYB0 1731 aa27.63■■■□□ 2.01
DDB1-220ENST00000542337 ANKRD26Q9UPS8 1709 aa27.62■■■□□ 2.01
DDB1-220ENST00000542337 PTGER2P43116 358 aa27.62■■■□□ 2.01
DDB1-220ENST00000542337 KIF7Q2M1P5 1343 aa27.62■■■□□ 2.01
DDB1-220ENST00000542337 NKX1-1Q15270 411 aaPredicted RBP27.61■■■□□ 2.01
DDB1-220ENST00000542337 SLC16A10Q8TF71 515 aa27.61■■■□□ 2.01
DDB1-220ENST00000542337 SMARCC1Q92922 1105 aaPredicted RBP27.61■■■□□ 2.01
DDB1-220ENST00000542337 IFNL2Q8IZJ0 200 aa27.6■■■□□ 2.01
DDB1-220ENST00000542337 PAPPAQ13219 1627 aa27.59■■■□□ 2.01
DDB1-220ENST00000542337 ARXQ96QS3 562 aa27.55■■■□□ 2
DDB1-220ENST00000542337 IGSF1Q8N6C5 1336 aa27.55■■■□□ 2
DDB1-220ENST00000542337 PALLDQ8WX93 1383 aa27.55■■■□□ 2
DDB1-220ENST00000542337 PLEKHG2Q9H7P9 1386 aa27.55■■■□□ 2
DDB1-220ENST00000542337 PHKG2P15735 406 aa27.54■■■□□ 2
DDB1-220ENST00000542337 POLD1P28340 1107 aa27.54■■■□□ 2
DDB1-220ENST00000542337 PLEKHO1Q53GL0 409 aaPredicted RBP27.54■■■□□ 2
DDB1-220ENST00000542337 AMER1Q5JTC6 1135 aaPredicted RBP27.54■■■□□ 2
DDB1-220ENST00000542337 PNPLA7Q6ZV29 1317 aa27.54■■■□□ 2
DDB1-220ENST00000542337 PIGBQ92521 554 aa27.54■■■□□ 2
DDB1-220ENST00000542337 TMOD3Q9NYL9 352 aa27.54■■■□□ 2
DDB1-220ENST00000542337 MSH5O43196 834 aa27.53■■■□□ 2
DDB1-220ENST00000542337 SGIP1Q9BQI5 828 aa27.53■■■□□ 2
DDB1-220ENST00000542337 PKD1L3Q7Z443 1732 aa27.53■■■□□ 2
DDB1-220ENST00000542337 FHDC1Q9C0D6 1143 aaPredicted RBP27.52■■■□□ 2
DDB1-220ENST00000542337 LY75O60449 1722 aa27.51■■□□□ 1.99
DDB1-220ENST00000542337 HSP90AB1P08238 724 aaKnown RBP27.51■■□□□ 1.99
DDB1-220ENST00000542337 AMOTQ4VCS5 1084 aa27.51■■□□□ 1.99
DDB1-220ENST00000542337 SYT17Q9BSW7 474 aa27.5■■□□□ 1.99
DDB1-220ENST00000542337 FLAD1Q8NFF5 587 aa27.49■■□□□ 1.99
DDB1-220ENST00000542337 SULT6B1Q6IMI4 303 aa27.46■■□□□ 1.99
DDB1-220ENST00000542337 ZNF530Q6P9A1 599 aaPredicted RBP27.46■■□□□ 1.99
DDB1-220ENST00000542337 ERVV-2B6SEH9 535 aa27.45■■□□□ 1.98
DDB1-220ENST00000542337 PER1O15534 1290 aaPredicted RBP27.45■■□□□ 1.98
DDB1-220ENST00000542337 CC2D1BQ5T0F9 858 aaKnown RBP27.45■■□□□ 1.98
DDB1-220ENST00000542337 COL23A1Q86Y22 540 aaPredicted RBP27.45■■□□□ 1.98
DDB1-220ENST00000542337 DCAF5Q96JK2 942 aa27.45■■□□□ 1.98
DDB1-220ENST00000542337 AK7Q96M32 723 aa27.45■■□□□ 1.98
DDB1-220ENST00000542337 LOC102724428A0A0B4J2F2 783 aa27.44■■□□□ 1.98
DDB1-220ENST00000542337 IL13P35225 146 aa27.44■■□□□ 1.98
DDB1-220ENST00000542337 MTHFSP49914 203 aa27.44■■□□□ 1.98
DDB1-220ENST00000542337 SIK1P57059 783 aa27.44■■□□□ 1.98
DDB1-220ENST00000542337 C1orf141Q5JVX7 400 aa27.44■■□□□ 1.98
DDB1-220ENST00000542337 AEBP1Q8IUX7 1158 aa27.43■■□□□ 1.98
DDB1-220ENST00000542337 KLHL34Q8N239 644 aa27.43■■□□□ 1.98
DDB1-220ENST00000542337 QSER1Q2KHR3 1735 aa27.42■■□□□ 1.98
DDB1-220ENST00000542337 YY1P25490 414 aa27.42■■□□□ 1.98
DDB1-220ENST00000542337 ASAP1Q9ULH1 1129 aa27.42■■□□□ 1.98
DDB1-220ENST00000542337 TOGARAM1Q9Y4F4 1720 aa27.41■■□□□ 1.98
DDB1-220ENST00000542337 CABP4P57796 275 aa27.4■■□□□ 1.98
DDB1-220ENST00000542337 MAP3K5Q99683 1374 aa27.39■■□□□ 1.98
DDB1-220ENST00000542337 ATP6V1AP38606 617 aa27.39■■□□□ 1.98
DDB1-220ENST00000542337 ATG3Q9NT62 314 aa27.39■■□□□ 1.98
DDB1-220ENST00000542337 ITGB4P16144 1822 aa27.39■■□□□ 1.97
DDB1-220ENST00000542337 CNGB1Q14028 1251 aaPredicted RBP27.37■■□□□ 1.97
DDB1-220ENST00000542337 DIAPH1O60610 1272 aaKnown RBP27.36■■□□□ 1.97
DDB1-220ENST00000542337 C5P01031 1676 aa27.36■■□□□ 1.97
DDB1-220ENST00000542337 KDRP35968 1356 aa27.35■■□□□ 1.97
DDB1-220ENST00000542337 NPC1L1Q9UHC9 1359 aa27.35■■□□□ 1.97
DDB1-220ENST00000542337 MSL1Q68DK7 614 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 1491.2 ms