RNA–Protein interactions for RNA: ENST00000542174.5

CDK2AP1-205, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 2 BASIC

Gene CDK2AP1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-205ENST00000542174 ARHGAP45Q92619 1136 aa18.79■□□□□ 0.6
CDK2AP1-205ENST00000542174 VAMP4O75379 141 aa18.79■□□□□ 0.6
CDK2AP1-205ENST00000542174 EIF4A2Q14240 407 aaKnown RBP18.79■□□□□ 0.6
CDK2AP1-205ENST00000542174 CFAP44Q96MT7 982 aa18.79■□□□□ 0.6
CDK2AP1-205ENST00000542174 PHF8Q9UPP1 1060 aa18.79■□□□□ 0.6
CDK2AP1-205ENST00000542174 XPCQ01831 940 aaPredicted RBP18.78■□□□□ 0.6
CDK2AP1-205ENST00000542174 NUTM2BA6NNL0 878 aaPredicted RBP18.77■□□□□ 0.59
CDK2AP1-205ENST00000542174 NUTM2EB1AL46 878 aaPredicted RBP18.77■□□□□ 0.59
CDK2AP1-205ENST00000542174 NUTM2AQ8IVF1 878 aaPredicted RBP18.77■□□□□ 0.59
CDK2AP1-205ENST00000542174 CHMP4BQ9H444 224 aaKnown RBP18.77■□□□□ 0.59
CDK2AP1-205ENST00000542174 PDZRN3Q9UPQ7 1066 aa18.77■□□□□ 0.59
CDK2AP1-205ENST00000542174 SPATA31A3Q5VYP0 1347 aa18.76■□□□□ 0.59
CDK2AP1-205ENST00000542174 PIK3C2AO00443 1686 aa18.76■□□□□ 0.59
CDK2AP1-205ENST00000542174 ITPRIPQ8IWB1 547 aa18.76■□□□□ 0.59
CDK2AP1-205ENST00000542174 MBIPQ9NS73 344 aa18.76■□□□□ 0.59
CDK2AP1-205ENST00000542174 LAS1LQ9Y4W2 734 aaKnown RBP18.76■□□□□ 0.59
CDK2AP1-205ENST00000542174 TMEM57Q8N5G2 664 aa18.75■□□□□ 0.59
CDK2AP1-205ENST00000542174 MRPL50Q8N5N7 158 aaKnown RBP18.75■□□□□ 0.59
CDK2AP1-205ENST00000542174 ZBTB40Q9NUA8 1239 aa18.75■□□□□ 0.59
CDK2AP1-205ENST00000542174 ARHGEF10O15013 1369 aa18.75■□□□□ 0.59
CDK2AP1-205ENST00000542174 THUMPD2Q9BTF0 503 aaKnown RBP18.74■□□□□ 0.59
CDK2AP1-205ENST00000542174 SBNO1A3KN83 1393 aa18.74■□□□□ 0.59
CDK2AP1-205ENST00000542174 SULT6B1Q6IMI4 303 aa18.74■□□□□ 0.59
CDK2AP1-205ENST00000542174 KRT28Q7Z3Y7 464 aa18.74■□□□□ 0.59
CDK2AP1-205ENST00000542174 MARF1Q9Y4F3 1742 aaKnown RBP18.73■□□□□ 0.59
CDK2AP1-205ENST00000542174 MEX3CQ5U5Q3 659 aaKnown RBP18.73■□□□□ 0.59
CDK2AP1-205ENST00000542174 NGDNQ8NEJ9 315 aaKnown RBP18.73■□□□□ 0.59
CDK2AP1-205ENST00000542174 TRPM3Q9HCF6 1732 aaPredicted RBP18.72■□□□□ 0.59
CDK2AP1-205ENST00000542174 FLT4P35916 1363 aa18.72■□□□□ 0.59
CDK2AP1-205ENST00000542174 KIF24Q5T7B8 1368 aa18.72■□□□□ 0.59
CDK2AP1-205ENST00000542174 HAP1P54257 671 aaPredicted RBP18.72■□□□□ 0.59
CDK2AP1-205ENST00000542174 ZNF772Q68DY9 489 aaPredicted RBP18.72■□□□□ 0.59
CDK2AP1-205ENST00000542174 TNS3Q68CZ2 1445 aa18.72■□□□□ 0.59
CDK2AP1-205ENST00000542174 TWISTNBQ3B726 338 aaPredicted RBP18.71■□□□□ 0.59
CDK2AP1-205ENST00000542174 SMC5Q8IY18 1101 aa18.71■□□□□ 0.59
CDK2AP1-205ENST00000542174 AFF2P51816 1311 aa18.71■□□□□ 0.59
CDK2AP1-205ENST00000542174 MAP3K19Q56UN5 1328 aa18.7■□□□□ 0.58
CDK2AP1-205ENST00000542174 HSP90AB2PQ58FF8 381 aa18.7■□□□□ 0.58
CDK2AP1-205ENST00000542174 AEBP1Q8IUX7 1158 aa18.7■□□□□ 0.58
CDK2AP1-205ENST00000542174 TSPYL6Q8N831 410 aa18.7■□□□□ 0.58
CDK2AP1-205ENST00000542174 KDRP35968 1356 aa18.69■□□□□ 0.58
CDK2AP1-205ENST00000542174 KIAA0232Q92628 1395 aa18.68■□□□□ 0.58
CDK2AP1-205ENST00000542174 ABCC4O15439 1325 aa18.68■□□□□ 0.58
CDK2AP1-205ENST00000542174 ALS2Q96Q42 1657 aa18.68■□□□□ 0.58
CDK2AP1-205ENST00000542174 C8orf37Q96NL8 207 aa18.68■□□□□ 0.58
CDK2AP1-205ENST00000542174 FAM83GA6ND36 823 aa18.67■□□□□ 0.58
CDK2AP1-205ENST00000542174 CHL1O00533 1208 aa18.67■□□□□ 0.58
CDK2AP1-205ENST00000542174 ADAMTS2O95450 1211 aa18.67■□□□□ 0.58
CDK2AP1-205ENST00000542174 PSME1Q06323 249 aa18.67■□□□□ 0.58
CDK2AP1-205ENST00000542174 FNBP4Q8N3X1 1017 aaPredicted RBP18.67■□□□□ 0.58
CDK2AP1-205ENST00000542174 C8orf58Q8NAV2 365 aa18.67■□□□□ 0.58
CDK2AP1-205ENST00000542174 API5Q9BZZ5 524 aaKnown RBP18.67■□□□□ 0.58
CDK2AP1-205ENST00000542174 USP19O94966 1318 aa18.66■□□□□ 0.58
CDK2AP1-205ENST00000542174 ZBTB7BO15156 539 aaPredicted RBP18.66■□□□□ 0.58
CDK2AP1-205ENST00000542174 ABCA3Q99758 1704 aa18.66■□□□□ 0.58
CDK2AP1-205ENST00000542174 IGSF1Q8N6C5 1336 aa18.65■□□□□ 0.58
CDK2AP1-205ENST00000542174 DAXXQ9UER7 740 aaPredicted RBP18.65■□□□□ 0.58
CDK2AP1-205ENST00000542174 DCTN1Q14203 1278 aa18.64■□□□□ 0.57
CDK2AP1-205ENST00000542174 CACNA1FO60840 1977 aa18.64■□□□□ 0.57
CDK2AP1-205ENST00000542174 CRB1P82279 1406 aa18.63■□□□□ 0.57
CDK2AP1-205ENST00000542174 AMPHP49418 695 aa18.63■□□□□ 0.57
CDK2AP1-205ENST00000542174 NGLY1Q96IV0 654 aa18.63■□□□□ 0.57
CDK2AP1-205ENST00000542174 BCL9LQ86UU0 1499 aa18.63■□□□□ 0.57
CDK2AP1-205ENST00000542174 USP35Q9P2H5 1018 aa18.63■□□□□ 0.57
CDK2AP1-205ENST00000542174 HTATSF1O43719 755 aaKnown RBP18.62■□□□□ 0.57
CDK2AP1-205ENST00000542174 NLRP6P59044 892 aa18.62■□□□□ 0.57
CDK2AP1-205ENST00000542174 CRYBG1Q9Y4K1 1723 aa18.62■□□□□ 0.57
CDK2AP1-205ENST00000542174 ELL2O00472 640 aaPredicted RBP18.61■□□□□ 0.57
CDK2AP1-205ENST00000542174 NUCB1Q02818 461 aa18.61■□□□□ 0.57
CDK2AP1-205ENST00000542174 NBR1Q14596 966 aa18.61■□□□□ 0.57
CDK2AP1-205ENST00000542174 GAS2L2Q8NHY3 880 aa18.61■□□□□ 0.57
CDK2AP1-205ENST00000542174 UPF2Q9HAU5 1272 aaKnown RBP18.61■□□□□ 0.57
CDK2AP1-205ENST00000542174 SLIT2O94813 1529 aa18.61■□□□□ 0.57
CDK2AP1-205ENST00000542174 LTN1O94822 1766 aa18.61■□□□□ 0.57
CDK2AP1-205ENST00000542174 GCC1Q96CN9 775 aa18.6■□□□□ 0.57
CDK2AP1-205ENST00000542174 LRRC37A3O60309 1634 aa18.6■□□□□ 0.57
CDK2AP1-205ENST00000542174 RTL1A6NKG5 1358 aa18.6■□□□□ 0.57
CDK2AP1-205ENST00000542174 SEC24BO95487 1268 aa18.6■□□□□ 0.57
CDK2AP1-205ENST00000542174 RXRBP28702 533 aa18.6■□□□□ 0.57
CDK2AP1-205ENST00000542174 RTL5Q5HYW3 569 aaPredicted RBP18.6■□□□□ 0.57
CDK2AP1-205ENST00000542174 CABLES1Q8TDN4 633 aa18.6■□□□□ 0.57
CDK2AP1-205ENST00000542174 EYA1Q99502 592 aa18.6■□□□□ 0.57
CDK2AP1-205ENST00000542174 QTRT2Q9H974 415 aaKnown RBP18.6■□□□□ 0.57
CDK2AP1-205ENST00000542174 ATRNO75882 1429 aa18.6■□□□□ 0.57
CDK2AP1-205ENST00000542174 SOX12O15370 315 aa18.59■□□□□ 0.57
CDK2AP1-205ENST00000542174 MCM10Q7L590 875 aa18.59■□□□□ 0.57
CDK2AP1-205ENST00000542174 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.59■□□□□ 0.57
CDK2AP1-205ENST00000542174 USP21Q9UK80 565 aa18.58■□□□□ 0.57
CDK2AP1-205ENST00000542174 HOXC9P31274 260 aa18.58■□□□□ 0.56
CDK2AP1-205ENST00000542174 MTHFSDQ2M296 383 aaKnown RBP18.58■□□□□ 0.56
CDK2AP1-205ENST00000542174 INTS3Q68E01 1043 aaKnown RBP18.58■□□□□ 0.56
CDK2AP1-205ENST00000542174 RTF1Q92541 710 aaKnown RBP18.58■□□□□ 0.56
CDK2AP1-205ENST00000542174 PTPRCP08575 1304 aa18.57■□□□□ 0.56
CDK2AP1-205ENST00000542174 PHRF1Q9P1Y6 1649 aaKnown RBP18.57■□□□□ 0.56
CDK2AP1-205ENST00000542174 ABTB2Q8N961 1025 aa18.57■□□□□ 0.56
CDK2AP1-205ENST00000542174 RBM6P78332 1123 aaKnown RBP18.56■□□□□ 0.56
CDK2AP1-205ENST00000542174 CHD1LQ86WJ1 897 aa18.56■□□□□ 0.56
CDK2AP1-205ENST00000542174 TBC1D32Q96NH3 1257 aa18.56■□□□□ 0.56
CDK2AP1-205ENST00000542174 EP400Q96L91 3159 aa18.56■□□□□ 0.56
CDK2AP1-205ENST00000542174 RGS12O14924 1447 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms