RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 INTS6LQ5JSJ4 861 aaKnown RBP8.18□□□□□ -1.1
LEMD3-204ENST00000542032 EMILIN1Q9Y6C2 1016 aa8.18□□□□□ -1.1
LEMD3-204ENST00000542032 PHF20L1A8MW92 1017 aa8.17□□□□□ -1.1
LEMD3-204ENST00000542032 BMP2P12643 396 aa8.17□□□□□ -1.1
LEMD3-204ENST00000542032 NR1H3Q13133 447 aa8.17□□□□□ -1.1
LEMD3-204ENST00000542032 NBPF20Q3BBV1 942 aa8.17□□□□□ -1.1
LEMD3-204ENST00000542032 PPP1R26Q5T8A7 1209 aaPredicted RBP8.17□□□□□ -1.1
LEMD3-204ENST00000542032 MEIOBQ8N635 442 aa8.17□□□□□ -1.1
LEMD3-204ENST00000542032 DHX9Q08211 1270 aaKnown RBP8.16□□□□□ -1.1
LEMD3-204ENST00000542032 DZIP3Q86Y13 1208 aaKnown RBP8.16□□□□□ -1.1
LEMD3-204ENST00000542032 NANOS1Q8WY41 292 aaKnown RBP8.16□□□□□ -1.1
LEMD3-204ENST00000542032 SOS2Q07890 1332 aaPredicted RBP8.15□□□□□ -1.1
LEMD3-204ENST00000542032 MCM6Q14566 821 aa8.15□□□□□ -1.1
LEMD3-204ENST00000542032 Q6ZVU0 165 aa8.15□□□□□ -1.1
LEMD3-204ENST00000542032 KRTAP19-1Q8IUB9 90 aa8.15□□□□□ -1.1
LEMD3-204ENST00000542032 SEPT12Q8IYM1 358 aa8.15□□□□□ -1.1
LEMD3-204ENST00000542032 TBC1D2BQ9UPU7 963 aa8.15□□□□□ -1.1
LEMD3-204ENST00000542032 ADAMTS2O95450 1211 aa8.14□□□□□ -1.11
LEMD3-204ENST00000542032 PTSQ03393 145 aa8.14□□□□□ -1.11
LEMD3-204ENST00000542032 IRF5Q13568 498 aa8.14□□□□□ -1.11
LEMD3-204ENST00000542032 TMEM132AQ24JP5 1023 aa8.14□□□□□ -1.11
LEMD3-204ENST00000542032 MCCD1P59942 119 aaPredicted RBP8.13□□□□□ -1.11
LEMD3-204ENST00000542032 PGPEP1Q9NXJ5 209 aa8.13□□□□□ -1.11
LEMD3-204ENST00000542032 CELA2BP08218 269 aaPredicted RBP8.12□□□□□ -1.11
LEMD3-204ENST00000542032 LINC00528Q8N1L1 170 aa8.12□□□□□ -1.11
LEMD3-204ENST00000542032 CDC14CA4D256 554 aa8.11□□□□□ -1.11
LEMD3-204ENST00000542032 ERVH48-1M5A8F1 160 aa8.11□□□□□ -1.11
LEMD3-204ENST00000542032 UPP2O95045 317 aa8.11□□□□□ -1.11
LEMD3-204ENST00000542032 VWA5B2Q8N398 1253 aa8.11□□□□□ -1.11
LEMD3-204ENST00000542032 KRTAP4-7Q9BYR0 210 aa8.11□□□□□ -1.11
LEMD3-204ENST00000542032 PCDHB9Q9Y5E1 797 aa8.11□□□□□ -1.11
LEMD3-204ENST00000542032 LILRA1O75019 489 aa8.1□□□□□ -1.11
LEMD3-204ENST00000542032 GIGYF1O75420 1035 aaPredicted RBP8.1□□□□□ -1.11
LEMD3-204ENST00000542032 CBLBQ13191 982 aa8.1□□□□□ -1.11
LEMD3-204ENST00000542032 PRM3Q9NNZ6 103 aa8.1□□□□□ -1.11
LEMD3-204ENST00000542032 TMPRSS4Q9NRS4 437 aa8.1□□□□□ -1.11
LEMD3-204ENST00000542032 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.09□□□□□ -1.11
LEMD3-204ENST00000542032 CCDC125Q86Z20 511 aa8.09□□□□□ -1.11
LEMD3-204ENST00000542032 CCDC155Q8N6L0 562 aa8.09□□□□□ -1.11
LEMD3-204ENST00000542032 ZNF784Q8NCA9 323 aaPredicted RBP8.09□□□□□ -1.11
LEMD3-204ENST00000542032 ZNF592Q92610 1267 aa8.09□□□□□ -1.11
LEMD3-204ENST00000542032 TSEN34Q9BSV6 310 aaKnown RBP8.09□□□□□ -1.11
LEMD3-204ENST00000542032 ENAMQ9NRM1 1142 aa8.09□□□□□ -1.11
LEMD3-204ENST00000542032 ZNF330Q9Y3S2 320 aaPredicted RBP8.09□□□□□ -1.11
LEMD3-204ENST00000542032 ADD1P35611 737 aaKnown RBP8.08□□□□□ -1.12
LEMD3-204ENST00000542032 BEND7Q8N7W2 519 aaPredicted RBP8.08□□□□□ -1.12
LEMD3-204ENST00000542032 GDPD2Q9HCC8 539 aa8.08□□□□□ -1.12
LEMD3-204ENST00000542032 SPINT1O43278 529 aa8.07□□□□□ -1.12
LEMD3-204ENST00000542032 PODNQ7Z5L7 613 aa8.07□□□□□ -1.12
LEMD3-204ENST00000542032 KDF1Q8NAX2 398 aaPredicted RBP8.07□□□□□ -1.12
LEMD3-204ENST00000542032 SV2AQ7L0J3 742 aa8.06□□□□□ -1.12
LEMD3-204ENST00000542032 COG6Q9Y2V7 657 aa8.06□□□□□ -1.12
LEMD3-204ENST00000542032 ADH1AP07327 375 aa8.05□□□□□ -1.12
LEMD3-204ENST00000542032 RAB15P59190 212 aa8.05□□□□□ -1.12
LEMD3-204ENST00000542032 RNF20Q5VTR2 975 aa8.05□□□□□ -1.12
LEMD3-204ENST00000542032 CEP126Q9P2H0 1117 aa8.05□□□□□ -1.12
LEMD3-204ENST00000542032 FIGNL2A6NMB9 653 aa8.04□□□□□ -1.12
LEMD3-204ENST00000542032 ERVK-9P63128 1117 aa8.04□□□□□ -1.12
LEMD3-204ENST00000542032 FLIIQ13045 1269 aa8.04□□□□□ -1.12
LEMD3-204ENST00000542032 PHTF2Q8N3S3 785 aa8.04□□□□□ -1.12
LEMD3-204ENST00000542032 KRBA1A5PL33 1030 aa8.03□□□□□ -1.12
LEMD3-204ENST00000542032 ITGA6P23229 1130 aa8.03□□□□□ -1.12
LEMD3-204ENST00000542032 EIF4G2P78344 907 aaKnown RBP eCLIP8.03□□□□□ -1.12
LEMD3-204ENST00000542032 SRSF11Q05519 484 aaKnown RBP8.03□□□□□ -1.12
LEMD3-204ENST00000542032 WASHC4Q2M389 1173 aa8.03□□□□□ -1.12
LEMD3-204ENST00000542032 AGBL1Q96MI9 1066 aa8.03□□□□□ -1.12
LEMD3-204ENST00000542032 CHIC2Q9UKJ5 165 aa8.03□□□□□ -1.12
LEMD3-204ENST00000542032 TTLL8A6PVC2 850 aa8.02□□□□□ -1.13
LEMD3-204ENST00000542032 ABL2P42684 1182 aa8.02□□□□□ -1.13
LEMD3-204ENST00000542032 VAC14Q08AM6 782 aa8.02□□□□□ -1.13
LEMD3-204ENST00000542032 ZMYM1Q5SVZ6 1142 aa8.02□□□□□ -1.13
LEMD3-204ENST00000542032 TRIM52Q96A61 297 aa8.02□□□□□ -1.13
LEMD3-204ENST00000542032 GOLGA2P5Q9HBQ8 144 aa8.02□□□□□ -1.13
LEMD3-204ENST00000542032 CYLDQ9NQC7 956 aa8.02□□□□□ -1.13
LEMD3-204ENST00000542032 TRAK2O60296 914 aa8.01□□□□□ -1.13
LEMD3-204ENST00000542032 ITGB7P26010 798 aa8.01□□□□□ -1.13
LEMD3-204ENST00000542032 PTGIRP43119 386 aa8.01□□□□□ -1.13
LEMD3-204ENST00000542032 CC2D2BQ6DHV5 1058 aa8.01□□□□□ -1.13
LEMD3-204ENST00000542032 NEDD1Q8NHV4 660 aa8.01□□□□□ -1.13
LEMD3-204ENST00000542032 POM121Q96HA1 1249 aa8.01□□□□□ -1.13
LEMD3-204ENST00000542032 CCDC85AQ96PX6 553 aaPredicted RBP8.01□□□□□ -1.13
LEMD3-204ENST00000542032 SLC35F4A4IF30 521 aa8□□□□□ -1.13
LEMD3-204ENST00000542032 SCTRP47872 440 aa8□□□□□ -1.13
LEMD3-204ENST00000542032 RELBQ01201 579 aa8□□□□□ -1.13
LEMD3-204ENST00000542032 SOX11P35716 441 aa7.99□□□□□ -1.13
LEMD3-204ENST00000542032 CTSOP43234 321 aaPredicted RBP7.99□□□□□ -1.13
LEMD3-204ENST00000542032 PCDHB11Q9Y5F2 797 aa7.99□□□□□ -1.13
LEMD3-204ENST00000542032 LCE1DQ5T752 114 aa7.98□□□□□ -1.13
LEMD3-204ENST00000542032 FOXD4L5Q5VV16 416 aaPredicted RBP7.98□□□□□ -1.13
LEMD3-204ENST00000542032 INSM2Q96T92 566 aaPredicted RBP7.98□□□□□ -1.13
LEMD3-204ENST00000542032 OSBPL3Q9H4L5 887 aa7.98□□□□□ -1.13
LEMD3-204ENST00000542032 ZNF395Q9H8N7 513 aaPredicted RBP7.98□□□□□ -1.13
LEMD3-204ENST00000542032 TSGA10IPQ3SY00 556 aa7.97□□□□□ -1.13
LEMD3-204ENST00000542032 RNF217Q8TC41 542 aa7.97□□□□□ -1.13
LEMD3-204ENST00000542032 CDCA7Q9BWT1 371 aaPredicted RBP7.97□□□□□ -1.13
LEMD3-204ENST00000542032 ATP5J2-PTCD1G3V325 749 aa7.96□□□□□ -1.14
LEMD3-204ENST00000542032 UBTFP17480 764 aaKnown RBP7.96□□□□□ -1.14
LEMD3-204ENST00000542032 ALG2Q9H553 416 aa7.96□□□□□ -1.14
LEMD3-204ENST00000542032 SCO2A0A1W2PP80 73 aa7.95□□□□□ -1.14
LEMD3-204ENST00000542032 GAS6Q14393 721 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms